RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 IER3IP1Q9Y5U9 82 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 DCDC2BA2VCK2 349 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 EFNA2O43921 213 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 OR7A10O76100 309 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 PLGP00747 810 aaPredicted RBP12.62□□□□□ -0.39
SMPD4-219ENST00000491128 PTHP01270 115 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 HSMCR30P0CW71 290 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 PNMTP11086 282 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 DBTP11182 482 aaKnown RBP12.62□□□□□ -0.39
SMPD4-219ENST00000491128 PRKCAP17252 672 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 ITGA3P26006 1051 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 DNASE1L1P49184 302 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 OC90Q02509 493 aaPredicted RBP12.62□□□□□ -0.39
SMPD4-219ENST00000491128 CNPY1Q3B7I2 92 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 KLHL12Q53G59 568 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 SPINK14Q6IE38 97 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 LINC00696Q6ZRV3 163 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 BEST3Q8N1M1 668 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 CLDN22Q8N7P3 220 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 SDR9C7Q8NEX9 313 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 OR9Q1Q8NGQ5 310 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 ZPLD1Q8TCW7 415 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 PSMF1Q92530 271 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 TTC9Q92623 222 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 UBL7Q96S82 380 aaPredicted RBP12.62□□□□□ -0.39
SMPD4-219ENST00000491128 PLA2G3Q9NZ20 509 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 TMEM5Q9Y2B1 443 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 HCN1O60741 890 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 SLC25A12O75746 678 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 RCBTB2O95199 551 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 CDK1P06493 297 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 CYC1P08574 325 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 LCN1P31025 176 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 ACER2Q5QJU3 275 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 ZNF362Q5T0B9 420 aaPredicted RBP12.62□□□□□ -0.39
SMPD4-219ENST00000491128 GTF2IRD2BQ6EKJ0 949 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 GTF2IRD2Q86UP8 949 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 TMPRSS12Q86WS5 348 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 FAM26EQ8N5C1 309 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 OR4F15Q8NGB8 312 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 ZFAND2BQ8WV99 257 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 RASD2Q96D21 266 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 PROK2Q9HC23 129 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 ACOT13Q9NPJ3 140 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 MED17Q9NVC6 651 aa12.62□□□□□ -0.39
SMPD4-219ENST00000491128 ZNF346Q9UL40 294 aaKnown RBP12.62□□□□□ -0.39
SMPD4-219ENST00000491128 FAM171A2A8MVW0 826 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 HPP00738 406 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 LIFP15018 202 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 HIST1H1CP16403 213 aaKnown RBP12.61□□□□□ -0.39
SMPD4-219ENST00000491128 NAGAP17050 411 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 RFC3P40938 356 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 LSM3P62310 102 aaKnown RBP12.61□□□□□ -0.39
SMPD4-219ENST00000491128 CRMP1Q14194 572 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 OR52E2Q8NGJ4 325 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 OR5M11Q96RB7 305 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 STMN3Q9NZ72 180 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 C21orf140B9A014 251 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 H7C1C5 153 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 NKX2-8O15522 239 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 MPZL2O60487 215 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 IGHEP01854 428 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 WT1P19544 449 aaPredicted RBP12.61□□□□□ -0.39
SMPD4-219ENST00000491128 AHCYP23526 432 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 LCN6P62502 163 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 OTPQ5XKR4 325 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 SLC6A19Q695T7 634 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 OPN5Q6U736 354 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 RTL4Q6ZR62 310 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 PRSS48Q7RTY5 328 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 TRUB1Q8WWH5 349 aaKnown RBP12.61□□□□□ -0.39
SMPD4-219ENST00000491128 PTP4A1Q93096 173 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 KATNB1Q9BVA0 655 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 GPR87Q9BY21 358 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 HES7Q9BYE0 225 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 EVA1AQ9H8M9 152 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 ASCL3Q9NQ33 180 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 PLCXD1Q9NUJ7 323 aa12.61□□□□□ -0.39
SMPD4-219ENST00000491128 ANKUB1A6NFN9 424 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 TP53I11O14683 189 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 MRPL3P09001 348 aaKnown RBP12.6□□□□□ -0.39
SMPD4-219ENST00000491128 PCSK6P29122 969 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 POLR2HP52434 150 aaKnown RBP12.6□□□□□ -0.39
SMPD4-219ENST00000491128 CDH11P55287 796 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 TOMM20Q15388 145 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 GLYR1Q49A26 553 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-219ENST00000491128 DCAF10Q5QP82 559 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 CXXC5Q7LFL8 322 aaKnown RBP12.6□□□□□ -0.39
SMPD4-219ENST00000491128 GRINAQ7Z429 371 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 ZBTB46Q86UZ6 589 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 CYP4Z2PQ8N1L4 340 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 ZNRF4Q8WWF5 429 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 RORBQ92753 470 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 RNFT2Q96EX2 444 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 SIGLEC11Q96RL6 698 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 NMNAT3Q96T66 252 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 TBX5Q99593 518 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 PTDSS2Q9BVG9 487 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 FKBP14Q9NWM8 211 aa12.6□□□□□ -0.39
SMPD4-219ENST00000491128 ZNF337Q9Y3M9 751 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms