RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	WDR45	Q9Y484	360 aa		13.28	□□□□□ -0.28
AGAP3-222	ENST00000490839	MEGF8	Q7Z7M0	2845 aa		13.28	□□□□□ -0.28
AGAP3-222	ENST00000490839	KLF11	O14901	512 aa		13.27	□□□□□ -0.29
AGAP3-222	ENST00000490839	ZNF208	O43345	1280 aa		13.27	□□□□□ -0.29
AGAP3-222	ENST00000490839	SNUPN	O95149	360 aa	Known RBP	13.27	□□□□□ -0.29
AGAP3-222	ENST00000490839	STAMBP	O95630	424 aa		13.27	□□□□□ -0.29
AGAP3-222	ENST00000490839	ERCC1	P07992	297 aa	Predicted RBP	13.27	□□□□□ -0.29
AGAP3-222	ENST00000490839	IMPDH2	P12268	514 aa		13.27	□□□□□ -0.29
AGAP3-222	ENST00000490839	CCNA2	P20248	432 aa		13.27	□□□□□ -0.29
AGAP3-222	ENST00000490839	PCMT1	P22061	227 aa		13.27	□□□□□ -0.29
AGAP3-222	ENST00000490839	APEX1	P27695	318 aa	Known RBP	13.27	□□□□□ -0.29
AGAP3-222	ENST00000490839	SLC1A3	P43003	542 aa		13.27	□□□□□ -0.29
AGAP3-222	ENST00000490839	C6orf136	Q5SQH8	315 aa		13.27	□□□□□ -0.29
AGAP3-222	ENST00000490839	ATAD3B	Q5T9A4	648 aa		13.27	□□□□□ -0.29
AGAP3-222	ENST00000490839	TYW3	Q6IPR3	259 aa	Known RBP	13.27	□□□□□ -0.29
AGAP3-222	ENST00000490839	PAQR6	Q6TCH4	344 aa		13.27	□□□□□ -0.29
AGAP3-222	ENST00000490839	UGT2A3	Q6UWM9	527 aa		13.27	□□□□□ -0.29
AGAP3-222	ENST00000490839	FNDC5	Q8NAU1	212 aa		13.27	□□□□□ -0.29
AGAP3-222	ENST00000490839	ZFAND2B	Q8WV99	257 aa		13.27	□□□□□ -0.29
AGAP3-222	ENST00000490839	PMM1	Q92871	262 aa		13.27	□□□□□ -0.29
AGAP3-222	ENST00000490839	SAP130	Q9H0E3	1048 aa		13.27	□□□□□ -0.29
AGAP3-222	ENST00000490839	OR51I1	Q9H343	314 aa		13.27	□□□□□ -0.29
AGAP3-222	ENST00000490839	TMED7-TICAM2	A0A0A6YYA0	188 aa		13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839		A0A0A6YYJ9	748 aa		13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	SLCO1B7	G3V0H7	640 aa		13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	NPHS1	O60500	1241 aa		13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	LILRA1	O75019	489 aa		13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	SLU7	O95391	586 aa	Known RBP	13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	DAO	P14920	347 aa		13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	CDH2	P19022	906 aa	Predicted RBP	13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	IL2RG	P31785	369 aa		13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	IDH2	P48735	452 aa	Known RBP	13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	POLR2H	P52434	150 aa	Known RBP	13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	MAP2K6	P52564	334 aa		13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	CDH15	P55291	814 aa		13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	KCNJ10	P78508	379 aa		13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	PLAUR	Q03405	335 aa		13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	C3orf36	Q3SXR2	165 aa		13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	TBRG1	Q3YBR2	411 aa		13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	AAED1	Q7RTV5	226 aa		13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	IFT20	Q8IY31	132 aa		13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	CLEC4F	Q8N1N0	589 aa		13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	OR9K2	Q8NGE7	335 aa		13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	NEU4	Q8WWR8	484 aa	Predicted RBP	13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	SF3B5	Q9BWJ5	86 aa	Known RBP	13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	PIF1	Q9H611	641 aa		13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	MOV10	Q9HCE1	1003 aa	Known RBP	13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	TMEM45A	Q9NWC5	275 aa		13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	TMED7	Q9Y3B3	224 aa		13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	PCDHB14	Q9Y5E9	798 aa		13.26	□□□□□ -0.29
AGAP3-222	ENST00000490839	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	TMEM72	A0PK05	275 aa		13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	RNASET2	O00584	256 aa	Known RBP	13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	FAM153B	P0C7A2	387 aa		13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	OR12D1	P0DN82	309 aa		13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	KRT4	P19013	534 aa		13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	UBE2N	P61088	152 aa	Known RBP	13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	HPCA	P84074	193 aa		13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	NAAA	Q02083	359 aa		13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	VHLL	Q6RSH7	139 aa		13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	FRRS1	Q6ZNA5	592 aa		13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	CLECL1	Q8IZS7	167 aa		13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	ZIC4	Q8N9L1	334 aa		13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	NUP37	Q8NFH4	326 aa		13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	OR4F15	Q8NGB8	312 aa		13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	OR1K1	Q8NGR3	316 aa		13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	AGR3	Q8TD06	166 aa		13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	ROPN1L	Q96C74	230 aa		13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	ZMYND19	Q96E35	227 aa	Predicted RBP	13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	C3orf30	Q96M34	536 aa		13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	C16orf45	Q96MC5	204 aa	Predicted RBP	13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	SNX18	Q96RF0	628 aa		13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	ZNF442	Q9H7R0	627 aa		13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	PPCS	Q9HAB8	311 aa		13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	CRNN	Q9UBG3	495 aa	Predicted RBP	13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	METRN	Q9UJH8	293 aa		13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	OSGIN1	Q9UJX0	560 aa		13.25	□□□□□ -0.29
AGAP3-222	ENST00000490839	ZNF587B	E7ETH6	402 aa		13.24	□□□□□ -0.29
AGAP3-222	ENST00000490839	KRT33A	O76009	404 aa		13.24	□□□□□ -0.29
AGAP3-222	ENST00000490839	LGI1	O95970	557 aa		13.24	□□□□□ -0.29
AGAP3-222	ENST00000490839	CECR9	P0C854	216 aa		13.24	□□□□□ -0.29
AGAP3-222	ENST00000490839	G6PD	P11413	515 aa		13.24	□□□□□ -0.29
AGAP3-222	ENST00000490839	DVL1P1	P54792	670 aa	Predicted RBP	13.24	□□□□□ -0.29
AGAP3-222	ENST00000490839	CLDN8	P56748	225 aa		13.24	□□□□□ -0.29
AGAP3-222	ENST00000490839	FUT5	Q11128	374 aa		13.24	□□□□□ -0.29
AGAP3-222	ENST00000490839	PGS1	Q32NB8	556 aa		13.24	□□□□□ -0.29
AGAP3-222	ENST00000490839	OR4F3	Q6IEY1	312 aa		13.24	□□□□□ -0.29
AGAP3-222	ENST00000490839	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	13.24	□□□□□ -0.29
AGAP3-222	ENST00000490839	ANKRD16	Q6P6B7	361 aa		13.24	□□□□□ -0.29
AGAP3-222	ENST00000490839	RINL	Q6ZS11	566 aa		13.24	□□□□□ -0.29
AGAP3-222	ENST00000490839	CMIP	Q8IY22	773 aa		13.24	□□□□□ -0.29
AGAP3-222	ENST00000490839	C4orf33	Q8N1A6	199 aa		13.24	□□□□□ -0.29
AGAP3-222	ENST00000490839	ZNF786	Q8N393	782 aa		13.24	□□□□□ -0.29
AGAP3-222	ENST00000490839	FAM169B	Q8N8A8	192 aa		13.24	□□□□□ -0.29
AGAP3-222	ENST00000490839	SEMA6D	Q8NFY4	1073 aa		13.24	□□□□□ -0.29
AGAP3-222	ENST00000490839	OR4A15	Q8NGL6	344 aa		13.24	□□□□□ -0.29
AGAP3-222	ENST00000490839	XAGE5	Q8WWM1	108 aa		13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms