RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	NLGN4X	Q8N0W4	816 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	SLC22A18AS	Q8N1D0	253 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	SPEM1	Q8N4L4	309 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	ZNF614	Q8N883	585 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	BCORP1	Q8N888	145 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	ZNF615	Q8N8J6	731 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	RCBTB1	Q8NDN9	531 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	PLPP5	Q8NEB5	264 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	FAM71C	Q8NEG0	241 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	OR5L2	Q8NGL0	311 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	OR9A4	Q8NGU2	314 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	CCL4L1	Q8NHW4	92 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	STK35	Q8TDR2	534 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	EDARADD	Q8WWZ3	215 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	ASB13	Q8WXK3	278 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	NSMAF	Q92636	917 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	PTP4A1	Q93096	173 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	UCN3	Q969E3	161 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	TMEM203	Q969S6	136 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	RFT1	Q96AA3	541 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	NACC2	Q96BF6	587 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	SENP5	Q96HI0	755 aa	Predicted RBP	5.82	□□□□□ -1.48
FN1-223	ENST00000490833	RADIL	Q96JH8	1075 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	CTRC	Q99895	268 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	ATF6B	Q99941	703 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	TMED9	Q9BVK6	235 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	HDHD5	Q9BXW7	423 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	BARHL1	Q9BZE3	327 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	SEMA4C	Q9C0C4	833 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	TGIF2	Q9GZN2	237 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	COMMD4	Q9H0A8	199 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	QRSL1	Q9H0R6	528 aa	Known RBP	5.82	□□□□□ -1.48
FN1-223	ENST00000490833	OR51V1	Q9H2C8	321 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	PPP1R3E	Q9H7J1	279 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	LMAN1L	Q9HAT1	526 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	MEPE	Q9NQ76	525 aa	Predicted RBP	5.82	□□□□□ -1.48
FN1-223	ENST00000490833	CTPS2	Q9NRF8	586 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	COMMD3	Q9UBI1	195 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	GRHPR	Q9UBQ7	328 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	CHRNA9	Q9UGM1	479 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	SUSD2	Q9UGT4	822 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	GDF2	Q9UK05	429 aa	Predicted RBP	5.82	□□□□□ -1.48
FN1-223	ENST00000490833	SPATA2	Q9UM82	520 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	ING4	Q9UNL4	249 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	CYP8B1	Q9UNU6	501 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	CAMK2A	Q9UQM7	478 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	HIF3A	Q9Y2N7	669 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	GPR52	Q9Y2T5	361 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	ZNF281	Q9Y2X9	895 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	ETV7	Q9Y603	341 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	ALPK3	Q96L96	1907 aa		5.82	□□□□□ -1.48
FN1-223	ENST00000490833	DOCK8	Q8NF50	2099 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	MYO7A	Q13402	2215 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	TRAV36DV7	A0A075B6V5	113 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833		A0A0A6YYC8	382 aa	Predicted RBP	5.81	□□□□□ -1.48
FN1-223	ENST00000490833	IGHV1OR15-9	A0A0B4J2B8	117 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	TRBV2	A0A0J9YWF9	115 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833		A0A1W2PQ09	198 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833		A0A1W2PR77	199 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	MEIOC	A2RUB1	952 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	MEGF11	A6BM72	1044 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	EPOP	A6NHQ4	379 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833		A6NIZ1	184 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	TMEM212	A6NML5	194 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	C17orf105	B2RV13	164 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833		B4DGG1	531 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	C2CD4D	B7Z1M9	353 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833		I3L1I5	382 aa	Predicted RBP	5.81	□□□□□ -1.48
FN1-223	ENST00000490833		J3QLW9	94 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	PEX12	O00623	359 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	RGS13	O14921	159 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	LYRM1	O43325	122 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	FOXS1	O43638	330 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	GSTZ1	O43708	216 aa	Predicted RBP	5.81	□□□□□ -1.48
FN1-223	ENST00000490833	PRAF2	O60831	178 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	SC5D	O75845	299 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	OR6A2	O95222	327 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	LYPD3	O95274	346 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	CH25H	O95992	272 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	THY1	P04216	161 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	GKN3P	P0CG01	181 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	CT45A8	P0DMV1	189 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	CT45A9	P0DMV2	189 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	CALCB	P10092	127 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	ZNF19	P17023	458 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	MAK	P20794	623 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	SLC2A5	P22732	501 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	HTR2A	P28223	471 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	GTF2E2	P29084	291 aa	Known RBP	5.81	□□□□□ -1.48
FN1-223	ENST00000490833	CRABP1	P29762	137 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	HOXA6	P31267	233 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	FAU	P35544	74 aa	Known RBP	5.81	□□□□□ -1.48
FN1-223	ENST00000490833	LTBR	P36941	435 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	CASP3	P42574	277 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	MMP15	P51511	669 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	TPTE	P56180	551 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	SLC26A5	P58743	744 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	STARD6	P59095	220 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	RAP1B	P61224	184 aa		5.81	□□□□□ -1.48
FN1-223	ENST00000490833	RPS4X	P62701	263 aa	Known RBP	5.81	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms