RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 MFSD8Q8NHS3 518 aa9.87□□□□□ -0.83
VARS2-210ENST00000490699 CPT1CQ8TCG5 803 aa9.87□□□□□ -0.83
VARS2-210ENST00000490699 SLC7A13Q8TCU3 470 aa9.87□□□□□ -0.83
VARS2-210ENST00000490699 GNPDA2Q8TDQ7 276 aa9.87□□□□□ -0.83
VARS2-210ENST00000490699 CPNE4Q96A23 557 aaPredicted RBP9.87□□□□□ -0.83
VARS2-210ENST00000490699 SLC25A36Q96CQ1 311 aa9.87□□□□□ -0.83
VARS2-210ENST00000490699 SNRNP40Q96DI7 357 aaKnown RBP9.87□□□□□ -0.83
VARS2-210ENST00000490699 BPIFA2Q96DR5 249 aa9.87□□□□□ -0.83
VARS2-210ENST00000490699 TEX12Q9BXU0 123 aa9.87□□□□□ -0.83
VARS2-210ENST00000490699 RASSF4Q9H2L5 321 aa9.87□□□□□ -0.83
VARS2-210ENST00000490699 FKRPQ9H9S5 495 aa9.87□□□□□ -0.83
VARS2-210ENST00000490699 NANSQ9NR45 359 aa9.87□□□□□ -0.83
VARS2-210ENST00000490699 MAN2C1Q9NTJ4 1040 aa9.87□□□□□ -0.83
VARS2-210ENST00000490699 TRAPPC4Q9Y296 219 aa9.87□□□□□ -0.83
VARS2-210ENST00000490699 CORINQ9Y5Q5 1042 aa9.87□□□□□ -0.83
VARS2-210ENST00000490699 CFAP47Q6ZTR5 3102 aa9.87□□□□□ -0.83
VARS2-210ENST00000490699 CELSR3Q9NYQ7 3312 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 A0A087WUU8 490 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 A0A1B0GTH9 108 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 SAC3D1A6NKF1 404 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 B4DXG7 233 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 NPIPA2E9PIF3 369 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 NPIPA3F8WFD2 350 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 PRRG2O14669 202 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 TNFSF11O14788 317 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 SEMA7AO75326 666 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 ATP6V1G2O95670 118 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 PMS2P2O95744 297 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 CH25HO95992 272 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 ADAP00813 363 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 GABRA1P14867 456 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 CPN1P15169 458 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 ZNF708P17019 499 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 PTNP21246 168 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 PTGER4P35408 488 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 DIO1P49895 249 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 CTBP2P56545 445 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 B3GALT5-AS1P59052 145 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 PRKCDQ05655 676 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 MYBPHQ13203 477 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 OR7A5Q15622 319 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 ANKDD1AQ495B1 522 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 OTUD3Q5T2D3 398 aaPredicted RBP9.86□□□□□ -0.83
VARS2-210ENST00000490699 GTF2IRD2BQ6EKJ0 949 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 VASNQ6EMK4 673 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 RPL13AP3Q6NVV1 102 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 LINC00114Q6XXX2 140 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 ZBTB49Q6ZSB9 765 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 TMPPEQ6ZT21 453 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 P4HA3Q7Z4N8 544 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 TSEN54Q7Z6J9 526 aaKnown RBP9.86□□□□□ -0.83
VARS2-210ENST00000490699 OAFQ86UD1 273 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 GTF2IRD2Q86UP8 949 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 MCEMP1Q8IX19 187 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 OR52L1Q8NGH7 329 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 OR4C15Q8NGM1 316 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 RBM4BQ9BQ04 359 aaKnown RBP9.86□□□□□ -0.83
VARS2-210ENST00000490699 KLHDC3Q9BQ90 382 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 PRSS27Q9BQR3 290 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 ZNF426Q9BUY5 554 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 RBM4Q9BWF3 364 aaKnown RBP9.86□□□□□ -0.83
VARS2-210ENST00000490699 OR11A1Q9GZK7 315 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 ASF1BQ9NVP2 202 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 ALKBH4Q9NXW9 302 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 ZNF229Q9UJW7 825 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 OAZ3Q9UMX2 235 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 LIPGQ9Y5X9 500 aa9.86□□□□□ -0.83
VARS2-210ENST00000490699 ZFHX4Q86UP3 3567 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 A0A1W2PNR3 127 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 WDR1O75083 606 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 OR7A10O76100 309 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 RCBTB2O95199 551 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 LYPD3O95274 346 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 THY1P04216 161 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 TPOP07202 933 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 HOXD4P09016 255 aaPredicted RBP9.85□□□□□ -0.83
VARS2-210ENST00000490699 ENPP1P22413 925 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 FPR3P25089 353 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 STARP49675 285 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 LHX2P50458 406 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 RAD23AP54725 363 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 CLDN15P56746 228 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 RAC3P60763 192 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 COX10Q12887 443 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 PPP1R8Q12972 351 aaKnown RBP9.85□□□□□ -0.83
VARS2-210ENST00000490699 PMS2P3Q13401 168 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 RFX4Q33E94 735 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 WDR88Q6ZMY6 472 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 TSPYL5Q86VY4 417 aaPredicted RBP9.85□□□□□ -0.83
VARS2-210ENST00000490699 P3H2Q8IVL5 708 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 SCAIQ8N9R8 606 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 PFN4Q8NHR9 129 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 MIB2Q96AX9 1013 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 FAM46AQ96IP4 442 aaKnown RBP9.85□□□□□ -0.83
VARS2-210ENST00000490699 TIMP4Q99727 224 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 CIB1Q99828 191 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 SLX1AQ9BQ83 275 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 PSD2Q9BQI7 771 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 UCK2Q9BZX2 261 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 KRT84Q9NSB2 600 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms