RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 RAG2P55895 527 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 MRPS11P82912 194 aaKnown RBP11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 NPRL3Q12980 569 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 SLC17A1Q14916 467 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 REP15Q6BDI9 236 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 CYS1Q717R9 158 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 LINGO2Q7L985 606 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 AAED1Q7RTV5 226 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 LRP11Q86VZ4 500 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 WDFY1Q8IWB7 410 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 ZIC4Q8N9L1 334 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 POMGNT2Q8NAT1 580 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 MRAPQ8TCY5 172 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 RAB8BQ92930 207 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 ZNF385AQ96PM9 386 aaKnown RBP11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 RSPO3Q9BXY4 272 aaPredicted RBP11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 HOXD1Q9GZZ0 328 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 CRLF2Q9HC73 371 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 CTPS2Q9NRF8 586 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 PLXNB1O43157 2135 aa11.68□□□□□ -0.54
EXOSC3-207ENST00000490516 NPIPB9F8W1W9 429 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 PDPK1O15530 556 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 DNPH1O43598 174 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 DNAJA2O60884 412 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 SMIM24O75264 130 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 CBR1P16152 277 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 MAGEB1P43366 347 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 ATP12AP54707 1039 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 SKP2Q13309 424 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 FAM189A2Q15884 450 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 TAF9Q16594 264 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 SPDYAQ5MJ70 313 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 ABHD12BQ7Z5M8 362 aaPredicted RBP11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 CCDC91Q7Z6B0 441 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 JAZF1Q86VZ6 243 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 TREML1Q86YW5 311 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 FAM169BQ8N8A8 192 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 DEFB108BQ8NET1 73 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 OR4F5Q8NH21 305 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 POP5Q969H6 163 aaKnown RBP11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 TMEM45BQ96B21 275 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 ALKBH3Q96Q83 286 aaPredicted RBP11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 CCDC106Q9BWC9 280 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 VPS11Q9H270 941 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 ACER3Q9NUN7 267 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 SIRT5Q9NXA8 310 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 CHRNA9Q9UGM1 479 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 FZR1Q9UM11 496 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 HDGFL3Q9Y3E1 203 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 POLR3HQ9Y535 204 aaPredicted RBP11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 KCNE3Q9Y6H6 103 aa11.67□□□□□ -0.54
EXOSC3-207ENST00000490516 ZNF503-AS2A6NEH8 195 aa11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 FAM181BA6NEQ2 426 aa11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 ZNF587BE7ETH6 402 aa11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 SELEP16581 610 aa11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 CCNA2P20248 432 aa11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 NR4A1P22736 598 aa11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 HMOX2P30519 316 aa11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 HSD17B3P37058 310 aa11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 ANP32AP39687 249 aaKnown RBP11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 RELBQ01201 579 aa11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 ZNF385BQ569K4 471 aa11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 DCST2Q5T1A1 773 aa11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 PDZK1Q5T2W1 519 aa11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 ZCCHC12Q6PEW1 402 aa11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 ZNF662Q6ZS27 426 aa11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 KLHL7Q8IXQ5 586 aa11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 SPC24Q8NBT2 197 aa11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 METTL6Q8TCB7 284 aa11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 MAGEE2Q8TD90 523 aaPredicted RBP11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 TMEM234Q8WY98 164 aa11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 MRRFQ96E11 262 aaKnown RBP11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 EGLN2Q96KS0 407 aa11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 OSBPL9Q96SU4 736 aa11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 LAT2Q9GZY6 243 aa11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 DUSP22Q9NRW4 184 aa11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 TMEM181Q9P2C4 612 aa11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 TMCO1Q9UM00 188 aa11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 TIMM22Q9Y584 194 aa11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 SPIN1Q9Y657 262 aaPredicted RBP11.66□□□□□ -0.54
EXOSC3-207ENST00000490516 HMGN2P05204 90 aaKnown RBP11.65□□□□□ -0.54
EXOSC3-207ENST00000490516 EFNA1P20827 205 aaPredicted RBP11.65□□□□□ -0.54
EXOSC3-207ENST00000490516 APOBEC1P41238 236 aaKnown RBP11.65□□□□□ -0.54
EXOSC3-207ENST00000490516 RAD52P43351 418 aa11.65□□□□□ -0.54
EXOSC3-207ENST00000490516 ATP4BP51164 291 aa11.65□□□□□ -0.54
EXOSC3-207ENST00000490516 DR1Q01658 176 aa11.65□□□□□ -0.54
EXOSC3-207ENST00000490516 CLCQ05315 142 aa11.65□□□□□ -0.54
EXOSC3-207ENST00000490516 LASP1Q14847 261 aaKnown RBP11.65□□□□□ -0.54
EXOSC3-207ENST00000490516 RASA2Q15283 850 aa11.65□□□□□ -0.54
EXOSC3-207ENST00000490516 ALKBH6Q3KRA9 238 aa11.65□□□□□ -0.54
EXOSC3-207ENST00000490516 ZNF362Q5T0B9 420 aaPredicted RBP11.65□□□□□ -0.54
EXOSC3-207ENST00000490516 KPRPQ5T749 579 aaPredicted RBP11.65□□□□□ -0.54
EXOSC3-207ENST00000490516 RETREG3Q86VR2 466 aa11.65□□□□□ -0.54
EXOSC3-207ENST00000490516 OR9K2Q8NGE7 335 aa11.65□□□□□ -0.54
EXOSC3-207ENST00000490516 STACQ99469 402 aa11.65□□□□□ -0.54
EXOSC3-207ENST00000490516 MS4A7Q9GZW8 240 aaPredicted RBP11.65□□□□□ -0.54
EXOSC3-207ENST00000490516 PIGUQ9H490 435 aa11.65□□□□□ -0.54
EXOSC3-207ENST00000490516 MMP26Q9NRE1 261 aa11.65□□□□□ -0.54
EXOSC3-207ENST00000490516 TRAPPC4Q9Y296 219 aa11.65□□□□□ -0.54
EXOSC3-207ENST00000490516 JRKLQ9Y4A0 524 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms