RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 LAMB4A4D0S4 1761 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 BCORQ6W2J9 1755 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 N4BP2Q86UW6 1770 aaPredicted RBP2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 TNRC6CQ9HCJ0 1690 aaKnown RBP2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 A0A087WZ39 114 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 C15orf62A8K5M9 175 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 RSPH10B2B2RC85 870 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 CLOCKO15516 846 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 GAGE7O76087 117 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 CLPTM1O96005 669 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 SERPIND1P05546 499 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 FCER2P06734 321 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 RSPH10BP0C881 870 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 UBCP0CG48 685 aaKnown RBP2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 GAGE12FP0CL80 117 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 GAGE12GP0CL81 117 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 GAGE12IP0CL82 117 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 MCF2P10911 925 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 PGCP20142 388 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 PSMA2P25787 234 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 STOMP27105 288 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 GTF2E2P29084 291 aaKnown RBP2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 QARSP47897 775 aaKnown RBP2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 UQCRFS1P47985 274 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 FHITP49789 147 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 STK19P49842 368 aaPredicted RBP2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 UBE2MP61081 183 aaKnown RBP2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 SKP1P63208 163 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 KLRB1Q12918 225 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 GAGE1Q13065 139 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 GAGE4Q13068 117 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 BEND3Q5T5X7 828 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 RNLSQ5VYX0 342 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 ZNF470Q6ECI4 717 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 FAM122CQ6P4D5 195 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 LEG1Q6P5S2 330 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 CWC27Q6UX04 472 aaKnown RBP2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 CCNI2Q6ZMN8 369 aaPredicted RBP2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 ZNF730Q6ZMV8 503 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 ZNF600Q6ZNG1 722 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 ASRGL1Q7L266 308 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 ZNF554Q86TJ5 538 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 PLD3Q8IV08 490 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 GPC2Q8N158 579 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 FAM58AQ8N1B3 248 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 KBTBD3Q8NAB2 608 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 CYB561A3Q8NBI2 242 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 PPFIBP2Q8ND30 876 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 OR7G2Q8NG99 324 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 OR52I1Q8NGK6 324 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 RDH11Q8TC12 318 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 MAGEE2Q8TD90 523 aaPredicted RBP2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 ART4Q93070 314 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 TSNARE1Q96NA8 513 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 SLC6A7Q99884 636 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 KCNS3Q9BQ31 491 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 IL22Q9GZX6 179 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 CHRNA10Q9GZZ6 450 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 RAB1BQ9H0U4 201 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 NXF5Q9H1B4 397 aaKnown RBP2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 OPN3Q9H1Y3 402 aaPredicted RBP2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 S100A14Q9HCY8 104 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 MYOZ2Q9NPC6 264 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 CHST11Q9NPF2 352 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 SDHAF3Q9NRP4 125 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 MAN2C1Q9NTJ4 1040 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 ECHDC1Q9NTX5 307 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 CLEC5AQ9NY25 188 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 CD300AQ9UGN4 299 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 ZNF221Q9UK13 617 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 TCF19Q9Y242 345 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 RNF6Q9Y252 685 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 SLX4Q8IY92 1834 aa2.7□□□□□ -1.98
DEPDC1-204ENST00000489862 BRCA1P38398 1863 aaKnown RBP2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 COL4A5P29400 1685 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 SCN7AQ01118 1682 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 KIF26BQ2KJY2 2108 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 FRG2CA6NGY1 282 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 TRPC5OSA6NMA1 111 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 SMLR1H3BR10 107 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 HIP1O00291 1037 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 ZNF195O14628 629 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 TAPBPO15533 448 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 ZW10O43264 779 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 GMDSO60547 372 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 SCN2BO60939 215 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 STX11O75558 287 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 CDK14O94921 469 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 BAG4O95429 457 aaKnown RBP2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 FRMD6-AS1P0C7T7 363 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 FAM157CP0CG43 387 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 TNNI1P19237 187 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 RPL4P36578 427 aaKnown RBP2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 PGFP49763 221 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 SLC7A2P52569 658 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 PKNOX1P55347 436 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 MAP3K7CLP57077 242 aa2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 RPS14P62263 151 aaKnown RBP2.69□□□□□ -1.98
DEPDC1-204ENST00000489862 UBE2V2Q15819 145 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms