RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 SURF4O15260 269 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 HBQ1P09105 142 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 FURINP09958 794 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 C9orf135Q5VTT2 229 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 MOB3CQ70IA8 216 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 HRASLS5Q96KN8 279 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 C11orf54Q9H0W9 315 aaPredicted RBP16.4■□□□□ 0.22
NPHP4-209ENST00000489180 SERTAD4Q9NUC0 356 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 TMEM100Q9NV29 134 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 SHPKQ9UHJ6 478 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 H0YGG7 62 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 H0YIV9 168 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 TNFRSF10AO00220 468 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 LIPAP38571 399 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 RPS18P62269 152 aaKnown RBP16.39■□□□□ 0.21
NPHP4-209ENST00000489180 RPS27AP62979 156 aaKnown RBP16.39■□□□□ 0.21
NPHP4-209ENST00000489180 UBA52P62987 128 aaKnown RBP16.39■□□□□ 0.21
NPHP4-209ENST00000489180 SLC7A9P82251 487 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 EEF1A2Q05639 463 aaKnown RBP16.39■□□□□ 0.21
NPHP4-209ENST00000489180 OR6F1Q8NGZ6 308 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 UBQLN4Q9NRR5 601 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 CLEC2DQ9UHP7 191 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 PTRH2Q9Y3E5 179 aaKnown RBP16.39■□□□□ 0.21
NPHP4-209ENST00000489180 ELAVL4P26378 380 aaKnown RBP16.39■□□□□ 0.21
NPHP4-209ENST00000489180 ERVK-16P61578 105 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 ABHD17BQ5VST6 288 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 SFXN4Q6P4A7 337 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 MFSD9Q8NBP5 474 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 CCNL2Q96S94 520 aaPredicted RBP16.39■□□□□ 0.21
NPHP4-209ENST00000489180 SLC6A20Q9NP91 592 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 PEX14O75381 377 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 RAB40ALP0C0E4 278 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 CNN3Q15417 329 aaKnown RBP16.39■□□□□ 0.21
NPHP4-209ENST00000489180 ADPRMQ3LIE5 342 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 OR2A12Q8NGT7 310 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 RAB40AQ8WXH6 277 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 PIGCQ92535 297 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 ZNF775Q96BV0 537 aaPredicted RBP16.39■□□□□ 0.21
NPHP4-209ENST00000489180 ANKRD30BLA7E2S9 258 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 HBMQ6B0K9 141 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 OR9K2Q8NGE7 335 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 OR52I1Q8NGK6 324 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 RLN3Q8WXF3 142 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 MIB2Q96AX9 1013 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 MICU1Q9BPX6 476 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 AMBRA1Q9C0C7 1298 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 RLIMQ9NVW2 624 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 SUSD2Q9UGT4 822 aa16.39■□□□□ 0.21
NPHP4-209ENST00000489180 STK17BO94768 372 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 MAKP20794 623 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 FOLR3P41439 243 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 C3orf38Q5JPI3 329 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 IDO2Q6ZQW0 420 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 FGF13Q92913 245 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 NMNAT3Q96T66 252 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 LMAN1LQ9HAT1 526 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 A0A1W2PS29 197 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 TMEM82A0PJX8 343 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 SNAPINO95295 136 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 CCR6P51684 374 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 LILRA3Q8N6C8 439 aaPredicted RBP16.38■□□□□ 0.21
NPHP4-209ENST00000489180 OR56B4Q8NH76 319 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 ABHD4Q8TB40 342 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 RSPRY1Q96DX4 576 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 TIAM2Q8IVF5 1701 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 ZNF705GA8MUZ8 300 aaPredicted RBP16.38■□□□□ 0.21
NPHP4-209ENST00000489180 PEA15Q15121 130 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 STK11Q15831 433 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 SLCO4C1Q6ZQN7 724 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 PRICKLE2Q7Z3G6 844 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 LRRC56Q8IYG6 542 aaPredicted RBP16.38■□□□□ 0.21
NPHP4-209ENST00000489180 RSC1A1Q92681 617 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 SNX18Q96RF0 628 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 PLCXD1Q9NUJ7 323 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 EFCAB7A8K855 629 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 OPCMLQ14982 345 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 PLGLAQ15195 96 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 TMEM207Q6UWW9 146 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 MBOAT2Q6ZWT7 520 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 OR4K15Q8NH41 348 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 TXNDC15Q96J42 360 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 FCRL1Q96LA6 429 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 TP53TG5Q9Y2B4 290 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 TCRBV5S1A1TA0A578 114 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 P2RX6O15547 441 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 LILRB3O75022 631 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 EIF2DP41214 584 aaKnown RBP16.38■□□□□ 0.21
NPHP4-209ENST00000489180 RPL23AP62750 156 aaKnown RBP16.38■□□□□ 0.21
NPHP4-209ENST00000489180 TNFRSF17Q02223 184 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 TMEM31Q5JXX7 168 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 WDR83Q9BRX9 315 aaKnown RBP16.38■□□□□ 0.21
NPHP4-209ENST00000489180 TIMM29Q9BSF4 260 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 CCL26Q9Y258 94 aa16.38■□□□□ 0.21
NPHP4-209ENST00000489180 HIDE1A8MVS5 230 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 DPM1O60762 260 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 RAP2BP61225 183 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 SIRPAP78324 504 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 FCN2Q15485 313 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 ESPNLQ6ZVH7 1005 aa16.37■□□□□ 0.21
NPHP4-209ENST00000489180 CPT1CQ8TCG5 803 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms