RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 ZNF747Q9BV97 191 aa13.99□□□□□ -0.17
USP48-210ENST00000489108 DYNLRB1Q9NP97 96 aa13.99□□□□□ -0.17
USP48-210ENST00000489108 CRNNQ9UBG3 495 aaPredicted RBP13.99□□□□□ -0.17
USP48-210ENST00000489108 EMCNQ9ULC0 261 aa13.99□□□□□ -0.17
USP48-210ENST00000489108 FIS1Q9Y3D6 152 aa13.99□□□□□ -0.17
USP48-210ENST00000489108 TRRAPQ9Y4A5 3859 aa13.99□□□□□ -0.17
USP48-210ENST00000489108 A0A087WUV0 522 aaPredicted RBP13.98□□□□□ -0.17
USP48-210ENST00000489108 VSTM5A8MXK1 200 aa13.98□□□□□ -0.17
USP48-210ENST00000489108 SCAMP2O15127 329 aaKnown RBP13.98□□□□□ -0.17
USP48-210ENST00000489108 STX11O75558 287 aa13.98□□□□□ -0.17
USP48-210ENST00000489108 MSMBP08118 114 aa13.98□□□□□ -0.17
USP48-210ENST00000489108 LINC00032P0C843 101 aa13.98□□□□□ -0.17
USP48-210ENST00000489108 LIMS1P48059 325 aa13.98□□□□□ -0.17
USP48-210ENST00000489108 UBE2NP61088 152 aaKnown RBP13.98□□□□□ -0.17
USP48-210ENST00000489108 GALNTL6Q49A17 601 aa13.98□□□□□ -0.17
USP48-210ENST00000489108 CFAP157Q5JU67 520 aa13.98□□□□□ -0.17
USP48-210ENST00000489108 FAHD2BQ6P2I3 314 aaPredicted RBP13.98□□□□□ -0.17
USP48-210ENST00000489108 ZYG11AQ6WRX3 759 aa13.98□□□□□ -0.17
USP48-210ENST00000489108 CDK20Q8IZL9 346 aa13.98□□□□□ -0.17
USP48-210ENST00000489108 FAM71CQ8NEG0 241 aa13.98□□□□□ -0.17
USP48-210ENST00000489108 BCL2L2Q92843 193 aaPredicted RBP13.98□□□□□ -0.17
USP48-210ENST00000489108 FAHD2AQ96GK7 314 aa13.98□□□□□ -0.17
USP48-210ENST00000489108 JMJD8Q96S16 334 aa13.98□□□□□ -0.17
USP48-210ENST00000489108 TPK1Q9H3S4 243 aa13.98□□□□□ -0.17
USP48-210ENST00000489108 TUBB1Q9H4B7 451 aa13.98□□□□□ -0.17
USP48-210ENST00000489108 ZNF442Q9H7R0 627 aa13.98□□□□□ -0.17
USP48-210ENST00000489108 TREM2Q9NZC2 230 aa13.98□□□□□ -0.17
USP48-210ENST00000489108 A0A096LPE4 126 aa13.97□□□□□ -0.17
USP48-210ENST00000489108 TMED7-TICAM2A0A0A6YYA0 188 aa13.97□□□□□ -0.17
USP48-210ENST00000489108 EXOC1LA0A1B0GW35 172 aa13.97□□□□□ -0.17
USP48-210ENST00000489108 A0A1W2PPZ6 126 aa13.97□□□□□ -0.17
USP48-210ENST00000489108 WNT9BO14905 357 aa13.97□□□□□ -0.17
USP48-210ENST00000489108 LSM1O15116 133 aaKnown RBP13.97□□□□□ -0.17
USP48-210ENST00000489108 KRT33AO76009 404 aa13.97□□□□□ -0.17
USP48-210ENST00000489108 AVPP01185 164 aa13.97□□□□□ -0.17
USP48-210ENST00000489108 IGLV1-44P01699 117 aa13.97□□□□□ -0.17
USP48-210ENST00000489108 CELA3BP08861 270 aa13.97□□□□□ -0.17
USP48-210ENST00000489108 MATN1P21941 496 aa13.97□□□□□ -0.17
USP48-210ENST00000489108 PAX7P23759 505 aa13.97□□□□□ -0.17
USP48-210ENST00000489108 COL8A2P25067 703 aa13.97□□□□□ -0.17
USP48-210ENST00000489108 HPCAL1P37235 193 aa13.97□□□□□ -0.17
USP48-210ENST00000489108 NAA20P61599 178 aa13.97□□□□□ -0.17
USP48-210ENST00000489108 LSM12Q3MHD2 195 aaKnown RBP13.97□□□□□ -0.17
USP48-210ENST00000489108 C3orf36Q3SXR2 165 aa13.97□□□□□ -0.17
USP48-210ENST00000489108 EMBQ6PCB8 327 aa13.97□□□□□ -0.17
USP48-210ENST00000489108 ABHD12BQ7Z5M8 362 aaPredicted RBP13.97□□□□□ -0.17
USP48-210ENST00000489108 MYPOPQ86VE0 399 aaPredicted RBP13.97□□□□□ -0.17
USP48-210ENST00000489108 TMEM99Q8N816 258 aa13.97□□□□□ -0.17
USP48-210ENST00000489108 OR9K2Q8NGE7 335 aa13.97□□□□□ -0.17
USP48-210ENST00000489108 SFXN5Q8TD22 340 aa13.97□□□□□ -0.17
USP48-210ENST00000489108 CKAP2Q8WWK9 683 aa13.97□□□□□ -0.17
USP48-210ENST00000489108 ANKRD27Q96NW4 1050 aa13.97□□□□□ -0.17
USP48-210ENST00000489108 SERHL2Q9H4I8 314 aa13.97□□□□□ -0.17
USP48-210ENST00000489108 TMED5Q9Y3A6 229 aa13.97□□□□□ -0.17
USP48-210ENST00000489108 TMED7Q9Y3B3 224 aa13.97□□□□□ -0.17
USP48-210ENST00000489108 LOC105371242A0A075B767 164 aa13.96□□□□□ -0.17
USP48-210ENST00000489108 ARPC4-TTLL3A0A0A6YYG9 625 aa13.96□□□□□ -0.17
USP48-210ENST00000489108 A0A0G2JK05 382 aa13.96□□□□□ -0.17
USP48-210ENST00000489108 TMEM72A0PK05 275 aa13.96□□□□□ -0.17
USP48-210ENST00000489108 AZIN1O14977 448 aa13.96□□□□□ -0.17
USP48-210ENST00000489108 CFLARO15519 480 aa13.96□□□□□ -0.17
USP48-210ENST00000489108 GPR6P46095 362 aaPredicted RBP13.96□□□□□ -0.17
USP48-210ENST00000489108 IDH2P48735 452 aaKnown RBP13.96□□□□□ -0.17
USP48-210ENST00000489108 ARHGAP11BQ3KRB8 267 aa13.96□□□□□ -0.17
USP48-210ENST00000489108 ATP6AP1LQ52LC2 224 aa13.96□□□□□ -0.17
USP48-210ENST00000489108 ELFN2Q5R3F8 820 aa13.96□□□□□ -0.17
USP48-210ENST00000489108 OTUD3Q5T2D3 398 aaPredicted RBP13.96□□□□□ -0.17
USP48-210ENST00000489108 C8orf74Q6P047 294 aa13.96□□□□□ -0.17
USP48-210ENST00000489108 PAQR6Q6TCH4 344 aa13.96□□□□□ -0.17
USP48-210ENST00000489108 SHISA2Q6UWI4 295 aa13.96□□□□□ -0.17
USP48-210ENST00000489108 MOAP1Q96BY2 351 aa13.96□□□□□ -0.17
USP48-210ENST00000489108 DDIT4LQ96D03 193 aa13.96□□□□□ -0.17
USP48-210ENST00000489108 RACGAP1Q9H0H5 632 aa13.96□□□□□ -0.17
USP48-210ENST00000489108 ESM1Q9NQ30 184 aa13.96□□□□□ -0.17
USP48-210ENST00000489108 DCDC2Q9UHG0 476 aa13.96□□□□□ -0.17
USP48-210ENST00000489108 PCDHGB4Q9UN71 923 aa13.96□□□□□ -0.17
USP48-210ENST00000489108 SLC35A3Q9Y2D2 325 aa13.96□□□□□ -0.17
USP48-210ENST00000489108 ZC3H12DA2A288 527 aaKnown RBP13.95□□□□□ -0.18
USP48-210ENST00000489108 OR6C65A6NJZ3 312 aa13.95□□□□□ -0.18
USP48-210ENST00000489108 DUXAA6NLW8 204 aa13.95□□□□□ -0.18
USP48-210ENST00000489108 ZNF587BE7ETH6 402 aa13.95□□□□□ -0.18
USP48-210ENST00000489108 AKR7A3O95154 331 aa13.95□□□□□ -0.18
USP48-210ENST00000489108 AK1P00568 194 aa13.95□□□□□ -0.18
USP48-210ENST00000489108 GAAP10253 952 aa13.95□□□□□ -0.18
USP48-210ENST00000489108 NEFHP12036 1026 aa13.95□□□□□ -0.18
USP48-210ENST00000489108 DNAJB13P59910 316 aa13.95□□□□□ -0.18
USP48-210ENST00000489108 TREML4Q6UXN2 200 aa13.95□□□□□ -0.18
USP48-210ENST00000489108 LINGO2Q7L985 606 aa13.95□□□□□ -0.18
USP48-210ENST00000489108 C6orf120Q7Z4R8 191 aa13.95□□□□□ -0.18
USP48-210ENST00000489108 HMGN2P46Q86SG4 172 aa13.95□□□□□ -0.18
USP48-210ENST00000489108 CLEC4FQ8N1N0 589 aa13.95□□□□□ -0.18
USP48-210ENST00000489108 ZDHHC22Q8N966 263 aa13.95□□□□□ -0.18
USP48-210ENST00000489108 OR51F2Q8NH61 342 aa13.95□□□□□ -0.18
USP48-210ENST00000489108 ACMSDQ8TDX5 336 aa13.95□□□□□ -0.18
USP48-210ENST00000489108 PMM1Q92871 262 aa13.95□□□□□ -0.18
USP48-210ENST00000489108 COQ8BQ96D53 544 aa13.95□□□□□ -0.18
USP48-210ENST00000489108 ZG16BQ96DA0 208 aa13.95□□□□□ -0.18
USP48-210ENST00000489108 ZNF350Q9GZX5 532 aa13.95□□□□□ -0.18
USP48-210ENST00000489108 GIMAP2Q9UG22 337 aa13.95□□□□□ -0.18
USP48-210ENST00000489108 OSGIN1Q9UJX0 560 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms