RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 DIRAS1O95057 198 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 GADD45GO95257 159 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 WISP1O95388 367 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 AHSA1O95433 338 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 SEMG1P04279 462 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 H1F0P07305 194 aaKnown RBP9.25□□□□□ -0.93
SKA1-204ENST00000488454 EPXP11678 715 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 GNLYP22749 145 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 GTF2E2P29084 291 aaKnown RBP9.25□□□□□ -0.93
SKA1-204ENST00000488454 IDUAP35475 653 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 RBM34P42696 430 aaKnown RBP9.25□□□□□ -0.93
SKA1-204ENST00000488454 SUCLG1P53597 346 aaKnown RBP9.25□□□□□ -0.93
SKA1-204ENST00000488454 CLDN18P56856 261 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 OR2B6P58173 313 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 VLDLRP98155 873 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 SPIBQ01892 262 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 MRPL49Q13405 166 aaKnown RBP9.25□□□□□ -0.93
SKA1-204ENST00000488454 KPNB1Q14974 876 aaKnown RBP9.25□□□□□ -0.93
SKA1-204ENST00000488454 C3AR1Q16581 482 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 EIF2S3LQ2VIR3 472 aaKnown RBP9.25□□□□□ -0.93
SKA1-204ENST00000488454 DCST1Q5T197 706 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 C1orf140Q5VVS0 124 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 TMEM211Q6ICI0 200 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 TMPPEQ6ZT21 453 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 ZNF771Q7L3S4 317 aaPredicted RBP9.25□□□□□ -0.93
SKA1-204ENST00000488454 P4HA3Q7Z4N8 544 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 DOLPP1Q86YN1 238 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 CHERPQ8IWX8 916 aaKnown RBP9.25□□□□□ -0.93
SKA1-204ENST00000488454 ADGRG5Q8IZF4 528 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 CDK20Q8IZL9 346 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 OFCC1Q8IZS5 231 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 C10orf53Q8N6V4 93 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 PIK3C3Q8NEB9 887 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 OR10D3Q8NH80 312 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 TRIB1Q96RU8 372 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 TMEM43Q9BTV4 400 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 SLC19A3Q9BZV2 496 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 KLHL4Q9C0H6 718 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 OR11A1Q9GZK7 315 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 CALHM2Q9HA72 323 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 NMNAT1Q9HAN9 279 aaPredicted RBP9.25□□□□□ -0.93
SKA1-204ENST00000488454 CCM2LQ9NUG4 571 aaPredicted RBP9.25□□□□□ -0.93
SKA1-204ENST00000488454 SH3BGRL2Q9UJC5 107 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 MCTS1Q9ULC4 181 aaKnown RBP9.25□□□□□ -0.93
SKA1-204ENST00000488454 TMCC3Q9ULS5 477 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 TRAPPC4Q9Y296 219 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 MED31Q9Y3C7 131 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 CHD6Q8TD26 2715 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 TRAV36DV7A0A075B6V5 113 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 A0A1B0GUH1 482 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 A0A1W2PRQ8 180 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 H0YC42 278 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 FFAR1O14842 300 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 CXCL13O43927 109 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 SEMA7AO75326 666 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 PMS2P2O95744 297 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 CST1P01037 141 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 MT-ND1P03886 318 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 THY1P04216 161 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 ACVR2AP27037 513 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 SHC1P29353 583 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 RPS5P46782 204 aaKnown RBP9.24□□□□□ -0.93
SKA1-204ENST00000488454 DIO1P49895 249 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 TPD52P55327 224 aaPredicted RBP9.24□□□□□ -0.93
SKA1-204ENST00000488454 RAC3P60763 192 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 ACTR3P61158 418 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 SLC35A1P78382 337 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 MYBPHQ13203 477 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 CCNIQ14094 377 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 DGCR6Q14129 220 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 FGD3Q5JSP0 725 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 C1orf185Q5T7R7 199 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 GTF2IRD2BQ6EKJ0 949 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 LINC00114Q6XXX2 140 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 B3GNT6Q6ZMB0 384 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 ZNF730Q6ZMV8 503 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 GTF2IRD2Q86UP8 949 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 GGNQ86UU5 652 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 P3H2Q8IVL5 708 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 NKAIN4Q8IVV8 208 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 RNF113BQ8IZP6 322 aaKnown RBP9.24□□□□□ -0.93
SKA1-204ENST00000488454 OR52J3Q8NH60 311 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 TMEM239Q8WW34 195 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 CPNE4Q96A23 557 aaPredicted RBP9.24□□□□□ -0.93
SKA1-204ENST00000488454 SLC25A36Q96CQ1 311 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 TUBA1CQ9BQE3 449 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 NAA11Q9BSU3 229 aaPredicted RBP9.24□□□□□ -0.93
SKA1-204ENST00000488454 ANKRD19PQ9H560 264 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 KRCC1Q9NPI7 259 aaPredicted RBP9.24□□□□□ -0.93
SKA1-204ENST00000488454 C6orf203Q9P0P8 240 aaPredicted RBP9.24□□□□□ -0.93
SKA1-204ENST00000488454 TINAGQ9UJW2 476 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 TESMINQ9Y4I5 508 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 AP4S1Q9Y587 144 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 COL6A6A6NMZ7 2263 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 ZFYVE26Q68DK2 2539 aa9.24□□□□□ -0.93
SKA1-204ENST00000488454 ZC3H12DA2A288 527 aaKnown RBP9.23□□□□□ -0.93
SKA1-204ENST00000488454 HTR3EA5X5Y0 456 aa9.23□□□□□ -0.93
SKA1-204ENST00000488454 CLCA1A8K7I4 914 aa9.23□□□□□ -0.93
SKA1-204ENST00000488454 ANKRD65E5RJM6 399 aa9.23□□□□□ -0.93
SKA1-204ENST00000488454 E9PLN8 166 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms