RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 HFEQ30201 348 aa3.05□□□□□ -1.92
ITGB1-214ENST00000488427 SBK1Q52WX2 424 aa3.05□□□□□ -1.92
ITGB1-214ENST00000488427 C9orf129Q5T035 196 aaKnown RBP3.05□□□□□ -1.92
ITGB1-214ENST00000488427 PAQR9Q6ZVX9 377 aa3.05□□□□□ -1.92
ITGB1-214ENST00000488427 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
ITGB1-214ENST00000488427 LRRC70Q7Z2Q7 622 aa3.05□□□□□ -1.92
ITGB1-214ENST00000488427 NET1Q7Z628 596 aaPredicted RBP3.05□□□□□ -1.92
ITGB1-214ENST00000488427 RALGPS2Q86X27 583 aaPredicted RBP3.05□□□□□ -1.92
ITGB1-214ENST00000488427 CCNYQ8ND76 341 aa3.05□□□□□ -1.92
ITGB1-214ENST00000488427 ZNF397Q8NF99 534 aaPredicted RBP3.05□□□□□ -1.92
ITGB1-214ENST00000488427 DNAJB3Q8WWF6 145 aa3.05□□□□□ -1.92
ITGB1-214ENST00000488427 MCHR2Q969V1 340 aa3.05□□□□□ -1.92
ITGB1-214ENST00000488427 ATP6V0BQ99437 205 aa3.05□□□□□ -1.92
ITGB1-214ENST00000488427 ZFP14Q9HCL3 533 aa3.05□□□□□ -1.92
ITGB1-214ENST00000488427 FAM114A2Q9NRY5 505 aa3.05□□□□□ -1.92
ITGB1-214ENST00000488427 TMEM9Q9P0T7 183 aa3.05□□□□□ -1.92
ITGB1-214ENST00000488427 MBD2Q9UBB5 411 aa3.05□□□□□ -1.92
ITGB1-214ENST00000488427 ISY1Q9ULR0 285 aaKnown RBP3.05□□□□□ -1.92
ITGB1-214ENST00000488427 ABCG2Q9UNQ0 655 aa3.05□□□□□ -1.92
ITGB1-214ENST00000488427 EXOSC1Q9Y3B2 195 aaKnown RBP3.05□□□□□ -1.92
ITGB1-214ENST00000488427 CNTRLQ7Z7A1 2325 aa3.05□□□□□ -1.92
ITGB1-214ENST00000488427 SONP18583 2426 aaKnown RBP3.04□□□□□ -1.92
ITGB1-214ENST00000488427 ABCB11O95342 1321 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 CCDC171Q6TFL3 1326 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 IGSF9BQ9UPX0 1349 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 MYBPHLA2RUH7 354 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 SDC3O75056 442 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 TOXO94900 526 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 NDUFA7O95182 113 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 ANP32DO95626 131 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 ACTL6AO96019 429 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 ADORA1P30542 326 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 CLDN6P56747 220 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 STX17P56962 302 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 OSTNP61366 133 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 ZP4Q12836 540 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 ORC2Q13416 577 aaPredicted RBP3.04□□□□□ -1.92
ITGB1-214ENST00000488427 ZNF699Q32M78 642 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 C1QTNF12Q5T7M4 302 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 HES3Q5TGS1 186 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 DMKNQ6E0U4 476 aaPredicted RBP3.04□□□□□ -1.92
ITGB1-214ENST00000488427 OR5M10Q6IEU7 315 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 FAM43BQ6ZT52 329 aaPredicted RBP3.04□□□□□ -1.92
ITGB1-214ENST00000488427 AMZ2Q86W34 360 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 SFRP1Q8N474 314 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 TSTD1Q8NFU3 115 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 URGCPQ8TCY9 931 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 IL1F10Q8WWZ1 152 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 VSIG2Q96IQ7 327 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 ELMO2Q96JJ3 720 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 TSSK1BQ9BXA7 367 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 RGS18Q9NS28 235 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 KLHDC2Q9Y2U9 406 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 TEX264Q9Y6I9 313 aa3.04□□□□□ -1.92
ITGB1-214ENST00000488427 MYH9P35579 1960 aaKnown RBP3.03□□□□□ -1.92
ITGB1-214ENST00000488427 MEGF8Q7Z7M0 2845 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 CUBNO60494 3623 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 FANCIQ9NVI1 1328 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 TTC26A0AVF1 554 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 ESYT2A0FGR8 921 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 DHRS7CA6NNS2 312 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 E9PMD0 336 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 SGK494L7N484 410 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 OR7A17O14581 309 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 CCL16O15467 120 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 TBL1XO60907 577 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 STAM2O75886 525 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 IGLV1-47P01700 117 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 LGALS2P05162 132 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 CCDC166P0CW27 439 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 BCKDHAP12694 445 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 HLCSP50747 726 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 RPS6P62753 249 aaKnown RBP3.03□□□□□ -1.92
ITGB1-214ENST00000488427 DMC1Q14565 340 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 PRR4Q16378 134 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 ZSWIM7Q19AV6 140 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 HSDL1Q3SXM5 330 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 TEX44Q53QW1 395 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 EOGTQ5NDL2 527 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 LIN9Q5TKA1 542 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 LIPKQ5VXJ0 399 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 SCYL2Q6P3W7 929 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 SCARA5Q6ZMJ2 495 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 PRSS48Q7RTY5 328 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 IFNEQ86WN2 208 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 ZNF677Q86XU0 584 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 ZGRF1Q86YA3 2104 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 C9orf40Q8IXQ3 194 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 PDCD6IPQ8WUM4 868 aaKnown RBP3.03□□□□□ -1.92
ITGB1-214ENST00000488427 FGGYQ96C11 551 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 IMMP1LQ96LU5 166 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 SMIM14Q96QK8 99 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 SDHCQ99643 169 aaPredicted RBP3.03□□□□□ -1.92
ITGB1-214ENST00000488427 CNPY3Q9BT09 278 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 NFKBIZQ9BYH8 718 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 NMNAT2Q9BZQ4 307 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 ZNF702PQ9H963 129 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.03□□□□□ -1.92
ITGB1-214ENST00000488427 PRO0461Q9UI25 63 aa3.03□□□□□ -1.92
ITGB1-214ENST00000488427 MOSPD1Q9UJG1 213 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms