RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 MARCH8Q5T0T0 291 aa1.59□□□□□ -2.15
SMC4-219ENST00000487747 OR6B2Q6IFH4 312 aa1.59□□□□□ -2.15
SMC4-219ENST00000487747 C15orf56Q8N910 161 aa1.59□□□□□ -2.15
SMC4-219ENST00000487747 MINDY2Q8NBR6 621 aa1.59□□□□□ -2.15
SMC4-219ENST00000487747 NANPQ8TBE9 248 aa1.59□□□□□ -2.15
SMC4-219ENST00000487747 RAET1EQ8TD07 263 aa1.59□□□□□ -2.15
SMC4-219ENST00000487747 KRT35Q92764 455 aa1.59□□□□□ -2.15
SMC4-219ENST00000487747 CCNL2Q96S94 520 aaPredicted RBP1.59□□□□□ -2.15
SMC4-219ENST00000487747 ZNF416Q9BWM5 594 aa1.59□□□□□ -2.15
SMC4-219ENST00000487747 POLD4Q9HCU8 107 aa1.59□□□□□ -2.15
SMC4-219ENST00000487747 MID1IP1Q9NPA3 183 aa1.59□□□□□ -2.15
SMC4-219ENST00000487747 CLCF1Q9UBD9 225 aa1.59□□□□□ -2.15
SMC4-219ENST00000487747 CLSPNQ9HAW4 1339 aa1.59□□□□□ -2.16
SMC4-219ENST00000487747 PLAC8L1A1L4L8 177 aa1.58□□□□□ -2.16
SMC4-219ENST00000487747 ADCY5O95622 1261 aa1.58□□□□□ -2.16
SMC4-219ENST00000487747 KIR2DS4P43632 304 aa1.58□□□□□ -2.16
SMC4-219ENST00000487747 ARRB1P49407 418 aaPredicted RBP1.58□□□□□ -2.16
SMC4-219ENST00000487747 UBE2AP49459 152 aa1.58□□□□□ -2.16
SMC4-219ENST00000487747 KIAA0087Q14695 138 aa1.58□□□□□ -2.16
SMC4-219ENST00000487747 ZNF571Q7Z3V5 609 aaPredicted RBP1.58□□□□□ -2.16
SMC4-219ENST00000487747 KIR3DL3Q8N743 410 aa1.58□□□□□ -2.16
SMC4-219ENST00000487747 OR4F15Q8NGB8 312 aa1.58□□□□□ -2.16
SMC4-219ENST00000487747 OR5W2Q8NH69 310 aa1.58□□□□□ -2.16
SMC4-219ENST00000487747 MCOLN3Q8TDD5 553 aa1.58□□□□□ -2.16
SMC4-219ENST00000487747 EXOSC8Q96B26 276 aaKnown RBP1.58□□□□□ -2.16
SMC4-219ENST00000487747 DEFB127Q9H1M4 99 aa1.58□□□□□ -2.16
SMC4-219ENST00000487747 ZFP14Q9HCL3 533 aa1.58□□□□□ -2.16
SMC4-219ENST00000487747 OR12D3Q9UGF7 316 aa1.58□□□□□ -2.16
SMC4-219ENST00000487747 UBIAD1Q9Y5Z9 338 aa1.58□□□□□ -2.16
SMC4-219ENST00000487747 DOCK8Q8NF50 2099 aa1.58□□□□□ -2.16
SMC4-219ENST00000487747 ABCC4O15439 1325 aa1.58□□□□□ -2.16
SMC4-219ENST00000487747 LTBP4Q8N2S1 1624 aa1.58□□□□□ -2.16
SMC4-219ENST00000487747 CARMIL3Q8ND23 1372 aa1.58□□□□□ -2.16
SMC4-219ENST00000487747 E7ESA3 106 aa1.57□□□□□ -2.16
SMC4-219ENST00000487747 RRP8O43159 456 aaKnown RBP1.57□□□□□ -2.16
SMC4-219ENST00000487747 UGT2B17O75795 530 aa1.57□□□□□ -2.16
SMC4-219ENST00000487747 OPN1LWP04000 364 aa1.57□□□□□ -2.16
SMC4-219ENST00000487747 SHMT2P34897 504 aa1.57□□□□□ -2.16
SMC4-219ENST00000487747 COPB2P35606 906 aa1.57□□□□□ -2.16
SMC4-219ENST00000487747 KIR3DL2P43630 455 aa1.57□□□□□ -2.16
SMC4-219ENST00000487747 ASMTP46597 345 aa1.57□□□□□ -2.16
SMC4-219ENST00000487747 HSPA2P54652 639 aa1.57□□□□□ -2.16
SMC4-219ENST00000487747 ARF5P84085 180 aa1.57□□□□□ -2.16
SMC4-219ENST00000487747 GABPB1Q06547 395 aaPredicted RBP1.57□□□□□ -2.16
SMC4-219ENST00000487747 IGFBP7Q16270 282 aa1.57□□□□□ -2.16
SMC4-219ENST00000487747 MAPK6Q16659 721 aa1.57□□□□□ -2.16
SMC4-219ENST00000487747 FBXW9Q5XUX1 488 aa1.57□□□□□ -2.16
SMC4-219ENST00000487747 TIGD3Q6B0B8 471 aa1.57□□□□□ -2.16
SMC4-219ENST00000487747 LYPD2Q6UXB3 125 aa1.57□□□□□ -2.16
SMC4-219ENST00000487747 FTMTQ8N4E7 242 aa1.57□□□□□ -2.16
SMC4-219ENST00000487747 TCTEX1D2Q8WW35 142 aa1.57□□□□□ -2.16
SMC4-219ENST00000487747 SIAEQ9HAT2 523 aa1.57□□□□□ -2.16
SMC4-219ENST00000487747 FOXJ3Q9UPW0 622 aa1.57□□□□□ -2.16
SMC4-219ENST00000487747 SPACA6W5XKT8 324 aa1.57□□□□□ -2.16
SMC4-219ENST00000487747 IGLV1-50A0A075B6I6 118 aa1.56□□□□□ -2.16
SMC4-219ENST00000487747 A8MUU9 505 aa1.56□□□□□ -2.16
SMC4-219ENST00000487747 DCTN6O00399 190 aa1.56□□□□□ -2.16
SMC4-219ENST00000487747 CA1P00915 261 aaPredicted RBP1.56□□□□□ -2.16
SMC4-219ENST00000487747 AHCYP23526 432 aa1.56□□□□□ -2.16
SMC4-219ENST00000487747 SLC26A3P40879 764 aa1.56□□□□□ -2.16
SMC4-219ENST00000487747 PTGDSP41222 190 aa1.56□□□□□ -2.16
SMC4-219ENST00000487747 RPS14P62263 151 aaKnown RBP1.56□□□□□ -2.16
SMC4-219ENST00000487747 ACTN3Q08043 901 aaPredicted RBP1.56□□□□□ -2.16
SMC4-219ENST00000487747 SRSF5Q13243 272 aaKnown RBP1.56□□□□□ -2.16
SMC4-219ENST00000487747 LINC01620Q4KN68 170 aa1.56□□□□□ -2.16
SMC4-219ENST00000487747 BCL7AQ4VC05 210 aa1.56□□□□□ -2.16
SMC4-219ENST00000487747 SPIN3Q5JUX0 258 aa1.56□□□□□ -2.16
SMC4-219ENST00000487747 LDLRAP1Q5SW96 308 aa1.56□□□□□ -2.16
SMC4-219ENST00000487747 C12orf60Q5U649 245 aa1.56□□□□□ -2.16
SMC4-219ENST00000487747 C1orf94Q6P1W5 598 aa1.56□□□□□ -2.16
SMC4-219ENST00000487747 CCDC54Q8NEL0 328 aa1.56□□□□□ -2.16
SMC4-219ENST00000487747 OR5AU1Q8NGC0 362 aa1.56□□□□□ -2.16
SMC4-219ENST00000487747 OR10G9Q8NGN4 311 aa1.56□□□□□ -2.16
SMC4-219ENST00000487747 PNPT1Q8TCS8 783 aaKnown RBP1.56□□□□□ -2.16
SMC4-219ENST00000487747 FGF11Q92914 225 aa1.56□□□□□ -2.16
SMC4-219ENST00000487747 LRRC58Q96CX6 371 aa1.56□□□□□ -2.16
SMC4-219ENST00000487747 SUDS3Q9H7L9 328 aaPredicted RBP1.56□□□□□ -2.16
SMC4-219ENST00000487747 PCYOX1Q9UHG3 505 aa1.56□□□□□ -2.16
SMC4-219ENST00000487747 ATP6V1HQ9UI12 483 aa1.56□□□□□ -2.16
SMC4-219ENST00000487747 MMACHCQ9Y4U1 282 aa1.56□□□□□ -2.16
SMC4-219ENST00000487747 SLC25A15Q9Y619 301 aa1.56□□□□□ -2.16
SMC4-219ENST00000487747 SH3TC1Q8TE82 1336 aa1.56□□□□□ -2.16
SMC4-219ENST00000487747 IGLV3-12A0A075B6K2 115 aa1.55□□□□□ -2.16
SMC4-219ENST00000487747 MBTPS2O43462 519 aa1.55□□□□□ -2.16
SMC4-219ENST00000487747 SRP72O76094 671 aaKnown RBP1.55□□□□□ -2.16
SMC4-219ENST00000487747 CA3P07451 260 aa1.55□□□□□ -2.16
SMC4-219ENST00000487747 LINC00869P0C866 280 aa1.55□□□□□ -2.16
SMC4-219ENST00000487747 PAICSP22234 425 aaKnown RBP1.55□□□□□ -2.16
SMC4-219ENST00000487747 ATP6AP1Q15904 470 aa1.55□□□□□ -2.16
SMC4-219ENST00000487747 GUCA2BQ16661 112 aa1.55□□□□□ -2.16
SMC4-219ENST00000487747 NCR3LG1Q68D85 454 aa1.55□□□□□ -2.16
SMC4-219ENST00000487747 LHFPL4Q7Z7J7 247 aa1.55□□□□□ -2.16
SMC4-219ENST00000487747 TMEM17Q86X19 198 aa1.55□□□□□ -2.16
SMC4-219ENST00000487747 RNF148Q8N7C7 305 aa1.55□□□□□ -2.16
SMC4-219ENST00000487747 OR5L2Q8NGL0 311 aa1.55□□□□□ -2.16
SMC4-219ENST00000487747 FCGR1BQ92637 280 aa1.55□□□□□ -2.16
SMC4-219ENST00000487747 TM4SF19Q96DZ7 209 aa1.55□□□□□ -2.16
SMC4-219ENST00000487747 OR2A5Q96R48 311 aa1.55□□□□□ -2.16
SMC4-219ENST00000487747 SLC6A7Q99884 636 aa1.55□□□□□ -2.16
SMC4-219ENST00000487747 FOLH1BQ9HBA9 442 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms