RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 UNQ9370/PRO34162Q6UXP9 181 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 FAM83FQ8NEG4 500 aaPredicted RBP3.29□□□□□ -1.88
SMC4-218ENST00000486711 DNAJA4Q8WW22 397 aaPredicted RBP3.29□□□□□ -1.88
SMC4-218ENST00000486711 OR1E3Q8WZA6 343 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 C16orf74Q96GX8 76 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 TCEANC2Q96MN5 208 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 TBX15Q96SF7 602 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 RNF2Q99496 336 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 SELENOIQ9C0D9 397 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 POLR2J2Q9GZM3 115 aaKnown RBP3.29□□□□□ -1.88
SMC4-218ENST00000486711 POLR2J3Q9H1A7 115 aaKnown RBP3.29□□□□□ -1.88
SMC4-218ENST00000486711 YY1AP1Q9H869 796 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 ZDHHC11Q9H8X9 412 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 FOLH1BQ9HBA9 442 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 HYPKQ9NX55 129 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 ASB3Q9Y575 518 aa3.29□□□□□ -1.88
SMC4-218ENST00000486711 A0A1B0GVL5 298 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 H0Y8G0 127 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 DCTN6O00399 190 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 NBR2O15453 112 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 FCMRO60667 390 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 BBOX1O75936 387 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 OXSR1O95747 527 aaPredicted RBP3.28□□□□□ -1.88
SMC4-218ENST00000486711 ATP6V1B2P21281 511 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 IL12AP29459 219 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 SHMT2P34897 504 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 UGT1A5P35504 534 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 PTGDSP41222 190 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 QARSP47897 775 aaKnown RBP3.28□□□□□ -1.88
SMC4-218ENST00000486711 SULT1E1P49888 294 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 DUSP3P51452 185 aaPredicted RBP3.28□□□□□ -1.88
SMC4-218ENST00000486711 CRYBB1P53674 252 aaPredicted RBP3.28□□□□□ -1.88
SMC4-218ENST00000486711 CDH4P55283 916 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 STX17P56962 302 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 RPL23AP62750 156 aaKnown RBP3.28□□□□□ -1.88
SMC4-218ENST00000486711 CSNK1G2P78368 415 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 OGDHQ02218 1023 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 ORC2Q13416 577 aaPredicted RBP3.28□□□□□ -1.88
SMC4-218ENST00000486711 ARFRP1Q13795 201 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 NSUN5P1Q3KNT7 163 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 OR52E8Q6IFG1 317 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 PGAP1Q75T13 922 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 CNPY4Q8N129 248 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 UBE2J2Q8N2K1 259 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 C11orf42Q8N5U0 333 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 CATSPER1Q8NEC5 780 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 OR2L5Q8NG80 312 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 OR8J1Q8NGP2 316 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 MAGEE2Q8TD90 523 aaPredicted RBP3.28□□□□□ -1.88
SMC4-218ENST00000486711 HIST1H4GQ99525 98 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 YTHDF1Q9BYJ9 559 aaKnown RBP3.28□□□□□ -1.88
SMC4-218ENST00000486711 NARFLQ9H6Q4 476 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 AZI2Q9H6S1 392 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 PLGRKTQ9HBL7 147 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 SH2D2AQ9NP31 389 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 ABCG2Q9UNQ0 655 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 V9GY05 133 aa3.28□□□□□ -1.88
SMC4-218ENST00000486711 PLEKHH1Q9ULM0 1364 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 TCRBV9S1A1TA0A576 114 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 SNX4O95219 450 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 STAMBPO95630 424 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 IGHV3-48P01763 117 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 KLK3P07288 261 aaPredicted RBP3.27□□□□□ -1.89
SMC4-218ENST00000486711 MX1P20591 662 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 ATP5IP56385 69 aaPredicted RBP3.27□□□□□ -1.89
SMC4-218ENST00000486711 SEC61GP60059 68 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 SELENOTP62341 195 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 OXA1LQ15070 435 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 DUSP7Q16829 419 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 MICBQ29980 383 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 PARP15Q460N3 678 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 KLF17Q5JT82 389 aaPredicted RBP3.27□□□□□ -1.89
SMC4-218ENST00000486711 C1orf146Q5VVC0 180 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 C11orf71Q6IPW1 123 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 SCARA5Q6ZMJ2 495 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 ZNF571Q7Z3V5 609 aaPredicted RBP3.27□□□□□ -1.89
SMC4-218ENST00000486711 FAM220AQ7Z4H9 259 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 NANOGNBQ7Z5D8 188 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 CEND1Q8N111 149 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 NECAB1Q8N987 351 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 CCDC71LQ8N9Z2 235 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 OR4K14Q8NGD5 310 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 OR52I1Q8NGK6 324 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 UFD1Q92890 307 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 FGF11Q92914 225 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 FBXO32Q969P5 355 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 PAGE5Q96GU1 130 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 IFT74Q96LB3 600 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 NPY6RQ99463 290 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 ARHGDIGQ99819 225 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 TCHPQ9BT92 498 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 SUDS3Q9H7L9 328 aaPredicted RBP3.27□□□□□ -1.89
SMC4-218ENST00000486711 THUMPD1Q9NXG2 353 aaKnown RBP3.27□□□□□ -1.89
SMC4-218ENST00000486711 SUN2Q9UH99 717 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 STAP1Q9ULZ2 295 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 RABL2BQ9UNT1 228 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 TRAF3IP3Q9Y228 551 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 RRP15Q9Y3B9 282 aaKnown RBP3.27□□□□□ -1.89
SMC4-218ENST00000486711 UGT2A1Q9Y4X1 527 aa3.27□□□□□ -1.89
SMC4-218ENST00000486711 N6AMT1Q9Y5N5 214 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms