RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 SH3YL1Q96HL8 342 aaPredicted RBP13.29□□□□□ -0.28
POLR2J3-204ENST00000486319 IP6K3Q96PC2 410 aa13.29□□□□□ -0.28
POLR2J3-204ENST00000486319 TMEM43Q9BTV4 400 aa13.29□□□□□ -0.28
POLR2J3-204ENST00000486319 RTN4RQ9BZR6 473 aa13.29□□□□□ -0.28
POLR2J3-204ENST00000486319 UBQLN3Q9H347 655 aa13.29□□□□□ -0.28
POLR2J3-204ENST00000486319 HHATLQ9HCP6 504 aa13.29□□□□□ -0.28
POLR2J3-204ENST00000486319 PTTG2Q9NZH5 202 aa13.29□□□□□ -0.28
POLR2J3-204ENST00000486319 MYOTQ9UBF9 498 aa13.29□□□□□ -0.28
POLR2J3-204ENST00000486319 BAIAP2Q9UQB8 552 aa13.29□□□□□ -0.28
POLR2J3-204ENST00000486319 PCNX3Q9H6A9 2034 aa13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 IRGMA1A4Y4 181 aa13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 PRODHO43272 600 aa13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 SCO2O43819 266 aa13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 PTP4A3O75365 173 aa13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 TRMUO75648 421 aaKnown RBP13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 INMTO95050 263 aa13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 STSP08842 583 aa13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 DBTP11182 482 aaKnown RBP13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 C21orf33P30042 268 aaPredicted RBP13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 ST13P50502 369 aaKnown RBP13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 CCL11P51671 97 aa13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 GP2P55259 537 aaKnown RBP13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 FXYD6P3P58550 94 aa13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 CHAF1BQ13112 559 aa13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 ATP1A4Q13733 1029 aa13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 PLAG1Q6DJT9 500 aa13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 C16orf47Q6ZP98 133 aaPredicted RBP13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 RTL4Q6ZR62 310 aa13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 M1APQ8TC57 530 aa13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 HGDQ93099 445 aa13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 NACC2Q96BF6 587 aa13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 ZNF582Q96NG8 517 aaPredicted RBP13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 DOK1Q99704 481 aa13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 CDCA4Q9BXL8 241 aa13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 ADAM19Q9H013 955 aa13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 ZNF71Q9NQZ8 489 aaPredicted RBP13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 WARS2Q9UGM6 360 aaKnown RBP13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 HS3ST3B1Q9Y662 390 aa13.28□□□□□ -0.28
POLR2J3-204ENST00000486319 A0A1W2PQ72 361 aa13.27□□□□□ -0.29
POLR2J3-204ENST00000486319 KDM4EB2RXH2 506 aaPredicted RBP13.27□□□□□ -0.29
POLR2J3-204ENST00000486319 BHLHE40O14503 412 aa13.27□□□□□ -0.29
POLR2J3-204ENST00000486319 GNB5O14775 395 aa13.27□□□□□ -0.29
POLR2J3-204ENST00000486319 CDC40O60508 579 aaKnown RBP eCLIP13.27□□□□□ -0.29
POLR2J3-204ENST00000486319 CH25HO95992 272 aa13.27□□□□□ -0.29
POLR2J3-204ENST00000486319 COX6A1P12074 109 aa13.27□□□□□ -0.29
POLR2J3-204ENST00000486319 FUT1P19526 365 aa13.27□□□□□ -0.29
POLR2J3-204ENST00000486319 SLC6A6P31641 620 aa13.27□□□□□ -0.29
POLR2J3-204ENST00000486319 RRADP55042 308 aa13.27□□□□□ -0.29
POLR2J3-204ENST00000486319 ZNF91Q05481 1191 aa13.27□□□□□ -0.29
POLR2J3-204ENST00000486319 C17orf67Q0P5P2 114 aa13.27□□□□□ -0.29
POLR2J3-204ENST00000486319 KLHL22Q53GT1 634 aa13.27□□□□□ -0.29
POLR2J3-204ENST00000486319 LNX2Q8N448 690 aa13.27□□□□□ -0.29
POLR2J3-204ENST00000486319 AMER2Q8N7J2 671 aa13.27□□□□□ -0.29
POLR2J3-204ENST00000486319 ANKK1Q8NFD2 765 aa13.27□□□□□ -0.29
POLR2J3-204ENST00000486319 B4GALNT2Q8NHY0 566 aa13.27□□□□□ -0.29
POLR2J3-204ENST00000486319 RFKQ969G6 155 aa13.27□□□□□ -0.29
POLR2J3-204ENST00000486319 TMEM80Q96HE8 168 aa13.27□□□□□ -0.29
POLR2J3-204ENST00000486319 IMMP1LQ96LU5 166 aa13.27□□□□□ -0.29
POLR2J3-204ENST00000486319 FER1L6-AS2Q96M78 137 aa13.27□□□□□ -0.29
POLR2J3-204ENST00000486319 FN3KQ9H479 309 aa13.27□□□□□ -0.29
POLR2J3-204ENST00000486319 MMP25Q9NPA2 562 aa13.27□□□□□ -0.29
POLR2J3-204ENST00000486319 RYDENQ9NUL5 291 aaKnown RBP13.27□□□□□ -0.29
POLR2J3-204ENST00000486319 TRAV27A0A087WT01 109 aa13.26□□□□□ -0.29
POLR2J3-204ENST00000486319 B8ZZF3 427 aa13.26□□□□□ -0.29
POLR2J3-204ENST00000486319 ZNF354AO60765 605 aaPredicted RBP13.26□□□□□ -0.29
POLR2J3-204ENST00000486319 NUDT14O95848 222 aa13.26□□□□□ -0.29
POLR2J3-204ENST00000486319 FBXO45P0C2W1 286 aa13.26□□□□□ -0.29
POLR2J3-204ENST00000486319 GP1BBP13224 206 aa13.26□□□□□ -0.29
POLR2J3-204ENST00000486319 ACVR2AP27037 513 aa13.26□□□□□ -0.29
POLR2J3-204ENST00000486319 PSMB9P28065 219 aa13.26□□□□□ -0.29
POLR2J3-204ENST00000486319 TACR3P29371 465 aa13.26□□□□□ -0.29
POLR2J3-204ENST00000486319 FBXW4P57775 412 aa13.26□□□□□ -0.29
POLR2J3-204ENST00000486319 IRF3Q14653 427 aa13.26□□□□□ -0.29
POLR2J3-204ENST00000486319 RNLSQ5VYX0 342 aa13.26□□□□□ -0.29
POLR2J3-204ENST00000486319 NDUFAF7Q7L592 441 aa13.26□□□□□ -0.29
POLR2J3-204ENST00000486319 OR51A7Q8NH64 312 aa13.26□□□□□ -0.29
POLR2J3-204ENST00000486319 RAB2BQ8WUD1 216 aa13.26□□□□□ -0.29
POLR2J3-204ENST00000486319 RNF138Q8WVD3 245 aa13.26□□□□□ -0.29
POLR2J3-204ENST00000486319 C12orf43Q96C57 262 aaKnown RBP13.26□□□□□ -0.29
POLR2J3-204ENST00000486319 IFT27Q9BW83 186 aa13.26□□□□□ -0.29
POLR2J3-204ENST00000486319 MRPS18AQ9NVS2 196 aaKnown RBP13.26□□□□□ -0.29
POLR2J3-204ENST00000486319 P4HTMQ9NXG6 502 aa13.26□□□□□ -0.29
POLR2J3-204ENST00000486319 IL20RAQ9UHF4 553 aa13.26□□□□□ -0.29
POLR2J3-204ENST00000486319 GPR52Q9Y2T5 361 aa13.26□□□□□ -0.29
POLR2J3-204ENST00000486319 ZNF337Q9Y3M9 751 aa13.26□□□□□ -0.29
POLR2J3-204ENST00000486319 PCDHGB6Q9Y5F9 930 aa13.26□□□□□ -0.29
POLR2J3-204ENST00000486319 IGKV1D-42A0A075B6H8 117 aa13.25□□□□□ -0.29
POLR2J3-204ENST00000486319 NSG1A0A0A6YYJ2 146 aa13.25□□□□□ -0.29
POLR2J3-204ENST00000486319 M0R3G1 203 aa13.25□□□□□ -0.29
POLR2J3-204ENST00000486319 OR2J2O76002 312 aa13.25□□□□□ -0.29
POLR2J3-204ENST00000486319 OR7A10O76100 309 aa13.25□□□□□ -0.29
POLR2J3-204ENST00000486319 NDUFB2O95178 105 aa13.25□□□□□ -0.29
POLR2J3-204ENST00000486319 CXCR1P25024 350 aa13.25□□□□□ -0.29
POLR2J3-204ENST00000486319 MST1P26927 711 aa13.25□□□□□ -0.29
POLR2J3-204ENST00000486319 SUMO3P55854 103 aaPredicted RBP13.25□□□□□ -0.29
POLR2J3-204ENST00000486319 AADACL4Q5VUY2 407 aa13.25□□□□□ -0.29
POLR2J3-204ENST00000486319 NXNL2Q5VZ03 156 aa13.25□□□□□ -0.29
POLR2J3-204ENST00000486319 LYPD8Q6UX82 237 aa13.25□□□□□ -0.29
POLR2J3-204ENST00000486319 PPP1R32Q7Z5V6 425 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms