RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 TPST1O60507 370 aa15.61■□□□□ 0.09
COL6A1-204ENST00000486023 SMPD2O60906 423 aa15.61■□□□□ 0.09
COL6A1-204ENST00000486023 BMP2P12643 396 aa15.61■□□□□ 0.09
COL6A1-204ENST00000486023 ETS2P15036 469 aa15.61■□□□□ 0.09
COL6A1-204ENST00000486023 NTF4P34130 210 aa15.61■□□□□ 0.09
COL6A1-204ENST00000486023 NR1H2P55055 460 aa15.61■□□□□ 0.09
COL6A1-204ENST00000486023 MTPNP58546 118 aa15.61■□□□□ 0.09
COL6A1-204ENST00000486023 ADAM8P78325 824 aa15.61■□□□□ 0.09
COL6A1-204ENST00000486023 IRX1P78414 480 aaPredicted RBP15.61■□□□□ 0.09
COL6A1-204ENST00000486023 NKX6-1P78426 367 aaPredicted RBP15.61■□□□□ 0.09
COL6A1-204ENST00000486023 FAPQ12884 760 aa15.61■□□□□ 0.09
COL6A1-204ENST00000486023 FOXD4Q12950 439 aaPredicted RBP15.61■□□□□ 0.09
COL6A1-204ENST00000486023 NFYCQ13952 458 aa15.61■□□□□ 0.09
COL6A1-204ENST00000486023 PDK3Q15120 406 aa15.61■□□□□ 0.09
COL6A1-204ENST00000486023 CYP51A1Q16850 503 aa15.61■□□□□ 0.09
COL6A1-204ENST00000486023 GLIPR1L2Q4G1C9 344 aa15.61■□□□□ 0.09
COL6A1-204ENST00000486023 RUNDC3AQ59EK9 446 aa15.61■□□□□ 0.09
COL6A1-204ENST00000486023 FBXW9Q5XUX1 488 aa15.61■□□□□ 0.09
COL6A1-204ENST00000486023 TMEM225Q6GV28 225 aa15.61■□□□□ 0.09
COL6A1-204ENST00000486023 ATG4DQ86TL0 474 aaPredicted RBP15.61■□□□□ 0.09
COL6A1-204ENST00000486023 P3H2Q8IVL5 708 aa15.61■□□□□ 0.09
COL6A1-204ENST00000486023 WFDC11Q8NEX6 87 aa15.61■□□□□ 0.09
COL6A1-204ENST00000486023 PIGTQ969N2 578 aa15.61■□□□□ 0.09
COL6A1-204ENST00000486023 NGBQ9NPG2 151 aa15.61■□□□□ 0.09
COL6A1-204ENST00000486023 BEX4Q9NWD9 120 aaPredicted RBP15.61■□□□□ 0.09
COL6A1-204ENST00000486023 ZNF446Q9NWS9 450 aa15.61■□□□□ 0.09
COL6A1-204ENST00000486023 UPB1Q9UBR1 384 aa15.61■□□□□ 0.09
COL6A1-204ENST00000486023 SLC13A4Q9UKG4 626 aa15.61■□□□□ 0.09
COL6A1-204ENST00000486023 CORO2BQ9UQ03 480 aa15.61■□□□□ 0.09
COL6A1-204ENST00000486023 A0A1W2PR80 420 aa15.6■□□□□ 0.09
COL6A1-204ENST00000486023 LIPT2A6NK58 231 aa15.6■□□□□ 0.09
COL6A1-204ENST00000486023 ELOA3DA6NLF2 546 aaPredicted RBP15.6■□□□□ 0.09
COL6A1-204ENST00000486023 DNPH1O43598 174 aa15.6■□□□□ 0.09
COL6A1-204ENST00000486023 RAD51DO75771 328 aa15.6■□□□□ 0.09
COL6A1-204ENST00000486023 TROVE2P10155 538 aaKnown RBP eCLIP15.6■□□□□ 0.09
COL6A1-204ENST00000486023 GGT1P19440 569 aa15.6■□□□□ 0.09
COL6A1-204ENST00000486023 MAP2K6P52564 334 aa15.6■□□□□ 0.09
COL6A1-204ENST00000486023 H3F3AP84243 136 aa15.6■□□□□ 0.09
COL6A1-204ENST00000486023 SELPLGQ14242 412 aa15.6■□□□□ 0.09
COL6A1-204ENST00000486023 ELOA3BQ3SY89 546 aa15.6■□□□□ 0.09
COL6A1-204ENST00000486023 C1orf140Q5VVS0 124 aa15.6■□□□□ 0.09
COL6A1-204ENST00000486023 PRAMEF8Q5VWM4 474 aa15.6■□□□□ 0.09
COL6A1-204ENST00000486023 PRAMEF7Q5VXH5 474 aa15.6■□□□□ 0.09
COL6A1-204ENST00000486023 ELOA3Q8NG57 546 aa15.6■□□□□ 0.09
COL6A1-204ENST00000486023 OR52E4Q8NGH9 312 aa15.6■□□□□ 0.09
COL6A1-204ENST00000486023 AKAP1Q92667 903 aaKnown RBP eCLIP15.6■□□□□ 0.09
COL6A1-204ENST00000486023 C3orf49Q96BT1 292 aa15.6■□□□□ 0.09
COL6A1-204ENST00000486023 MUCL1Q96DR8 90 aa15.6■□□□□ 0.09
COL6A1-204ENST00000486023 PERPQ96FX8 193 aa15.6■□□□□ 0.09
COL6A1-204ENST00000486023 ZNF607Q96SK3 696 aa15.6■□□□□ 0.09
COL6A1-204ENST00000486023 CPPED1Q9BRF8 314 aaPredicted RBP15.6■□□□□ 0.09
COL6A1-204ENST00000486023 SPATA5L1Q9BVQ7 753 aa15.6■□□□□ 0.09
COL6A1-204ENST00000486023 POTEKPQ9BYX7 375 aa15.6■□□□□ 0.09
COL6A1-204ENST00000486023 PIF1Q9H611 641 aa15.6■□□□□ 0.09
COL6A1-204ENST00000486023 ESRP2Q9H6T0 727 aaKnown RBP15.6■□□□□ 0.09
COL6A1-204ENST00000486023 FGFR1OP2Q9NVK5 253 aa15.6■□□□□ 0.09
COL6A1-204ENST00000486023 TMEM45AQ9NWC5 275 aa15.6■□□□□ 0.09
COL6A1-204ENST00000486023 TRBV5-3A0A0A0MS03 114 aa15.59■□□□□ 0.09
COL6A1-204ENST00000486023 CD3EP07766 207 aa15.59■□□□□ 0.09
COL6A1-204ENST00000486023 CDH2P19022 906 aaPredicted RBP15.59■□□□□ 0.09
COL6A1-204ENST00000486023 CBLP22681 906 aa15.59■□□□□ 0.09
COL6A1-204ENST00000486023 RPS5P46782 204 aaKnown RBP15.59■□□□□ 0.09
COL6A1-204ENST00000486023 ARFIP2P53365 341 aa15.59■□□□□ 0.09
COL6A1-204ENST00000486023 PPA1Q15181 289 aa15.59■□□□□ 0.09
COL6A1-204ENST00000486023 HSP90B2PQ58FF3 399 aa15.59■□□□□ 0.09
COL6A1-204ENST00000486023 PAQR6Q6TCH4 344 aa15.59■□□□□ 0.09
COL6A1-204ENST00000486023 RETREG3Q86VR2 466 aa15.59■□□□□ 0.09
COL6A1-204ENST00000486023 COMTD1Q86VU5 262 aa15.59■□□□□ 0.09
COL6A1-204ENST00000486023 ZNF433Q8N7K0 673 aaPredicted RBP15.59■□□□□ 0.09
COL6A1-204ENST00000486023 SMYD1Q8NB12 490 aa15.59■□□□□ 0.09
COL6A1-204ENST00000486023 OR52N5Q8NH56 324 aa15.59■□□□□ 0.09
COL6A1-204ENST00000486023 SIKE1Q9BRV8 207 aa15.59■□□□□ 0.09
COL6A1-204ENST00000486023 C1QTNF6Q9BXI9 259 aa15.59■□□□□ 0.09
COL6A1-204ENST00000486023 RSPO3Q9BXY4 272 aaPredicted RBP15.59■□□□□ 0.09
COL6A1-204ENST00000486023 PARPBPQ9NWS1 579 aa15.59■□□□□ 0.09
COL6A1-204ENST00000486023 ASB6Q9NWX5 421 aa15.59■□□□□ 0.09
COL6A1-204ENST00000486023 SERPINB7O75635 380 aa15.58■□□□□ 0.08
COL6A1-204ENST00000486023 AHSA1O95433 338 aa15.58■□□□□ 0.08
COL6A1-204ENST00000486023 GPX2P18283 190 aa15.58■□□□□ 0.08
COL6A1-204ENST00000486023 GTF2E2P29084 291 aaKnown RBP15.58■□□□□ 0.08
COL6A1-204ENST00000486023 PRKAR1BP31321 381 aa15.58■□□□□ 0.08
COL6A1-204ENST00000486023 SLC16A1P53985 500 aa15.58■□□□□ 0.08
COL6A1-204ENST00000486023 FOXG1P55316 489 aaPredicted RBP15.58■□□□□ 0.08
COL6A1-204ENST00000486023 NCALDP61601 193 aa15.58■□□□□ 0.08
COL6A1-204ENST00000486023 GUCY1A3Q02108 690 aa15.58■□□□□ 0.08
COL6A1-204ENST00000486023 ADRM1Q16186 407 aa15.58■□□□□ 0.08
COL6A1-204ENST00000486023 C20orf204Q6ZNR8 217 aa15.58■□□□□ 0.08
COL6A1-204ENST00000486023 AAED1Q7RTV5 226 aa15.58■□□□□ 0.08
COL6A1-204ENST00000486023 ARMC8Q8IUR7 673 aa15.58■□□□□ 0.08
COL6A1-204ENST00000486023 KDM8Q8N371 416 aa15.58■□□□□ 0.08
COL6A1-204ENST00000486023 HIPK4Q8NE63 616 aa15.58■□□□□ 0.08
COL6A1-204ENST00000486023 NEUROG1Q92886 237 aa15.58■□□□□ 0.08
COL6A1-204ENST00000486023 ANKRD27Q96NW4 1050 aa15.58■□□□□ 0.08
COL6A1-204ENST00000486023 ZNF385AQ96PM9 386 aaKnown RBP15.58■□□□□ 0.08
COL6A1-204ENST00000486023 CGREF1Q99674 301 aa15.58■□□□□ 0.08
COL6A1-204ENST00000486023 TMUB1Q9BVT8 246 aa15.58■□□□□ 0.08
COL6A1-204ENST00000486023 ZNF385DQ9H6B1 395 aa15.58■□□□□ 0.08
COL6A1-204ENST00000486023 TMEM38AQ9H6F2 299 aa15.58■□□□□ 0.08
COL6A1-204ENST00000486023 ANGPT4Q9Y264 503 aa15.58■□□□□ 0.08
COL6A1-204ENST00000486023 SLC9A8Q9Y2E8 581 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms