RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 DOCK7Q96N67 2140 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 A0A1B0GWA3 101 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 GMNCA6NCL1 334 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 AIM2O14862 343 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 AKR7A3O95154 331 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 PNMTP11086 282 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 COX4I1P13073 169 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 OR3A2P47893 321 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 GNGT1P63211 74 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 IL1RL1Q01638 556 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 DMTNQ08495 405 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 OR1Q1Q15612 314 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 VMACQ2NL98 169 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 ALG10BQ5I7T1 473 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 ABLIM2Q6H8Q1 611 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 PAQR6Q6TCH4 344 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 CASP12Q6UXS9 341 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 STAC2Q6ZMT1 411 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 NET1Q7Z628 596 aaPredicted RBP11.11□□□□□ -0.63
PTCD1-205ENST00000485746 ATG4DQ86TL0 474 aaPredicted RBP11.11□□□□□ -0.63
PTCD1-205ENST00000485746 GPAT4Q86UL3 456 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 WFDC8Q8IUA0 241 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 VANGL1Q8TAA9 524 aaPredicted RBP11.11□□□□□ -0.63
PTCD1-205ENST00000485746 RASSF5Q8WWW0 418 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 KISS1RQ969F8 398 aaPredicted RBP11.11□□□□□ -0.63
PTCD1-205ENST00000485746 APH1AQ96BI3 265 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 RCN3Q96D15 328 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 SLC47A1Q96FL8 570 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 MCHR1Q99705 422 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 PRR14Q9BWN1 585 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 PARPBPQ9NWS1 579 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 UPB1Q9UBR1 384 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 TESQ9UGI8 421 aaKnown RBP11.11□□□□□ -0.63
PTCD1-205ENST00000485746 PRSS50Q9UI38 385 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 CELSR2Q9HCU4 2923 aa11.11□□□□□ -0.63
PTCD1-205ENST00000485746 LIPT2A6NK58 231 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 CCT8L1PA6NM43 557 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 M0R3H8 397 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 DYNC1I1O14576 645 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 IFNA14P01570 189 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 PSMB1P20618 241 aaKnown RBP11.1□□□□□ -0.63
PTCD1-205ENST00000485746 CRYGSP22914 178 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 DNASE1P24855 282 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 CCKARP32238 428 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 RPS5P46782 204 aaKnown RBP11.1□□□□□ -0.63
PTCD1-205ENST00000485746 GYS2P54840 703 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 P2RY6Q15077 328 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 TSC22D1Q15714 1073 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 STK11Q15831 433 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 SFRP5Q5T4F7 317 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 CRYBG3Q68DQ2 2970 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 ERICH5Q6P6B1 374 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 ULK3Q6PHR2 472 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 BHLHA15Q7RTS1 189 aaPredicted RBP11.1□□□□□ -0.63
PTCD1-205ENST00000485746 LSRQ86X29 649 aaPredicted RBP11.1□□□□□ -0.63
PTCD1-205ENST00000485746 C10orf53Q8N6V4 93 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 TMEM99Q8N816 258 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 LSMEM1Q8N8F7 131 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 NRGNQ92686 78 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 PROX1Q92786 737 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 SLC38A4Q969I6 547 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 OR10A4Q9H209 315 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 EFCAB1Q9HAE3 211 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 C12orf10Q9HB07 376 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 SLC9A8Q9Y2E8 581 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 AP3M1Q9Y2T2 418 aa11.1□□□□□ -0.63
PTCD1-205ENST00000485746 INTS1Q8N201 2190 aaKnown RBP11.1□□□□□ -0.63
PTCD1-205ENST00000485746 IGKV3D-15A0A087WSY6 115 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 CIB4A0PJX0 185 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 FAM221AA4D161 298 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 ZNF716A6NP11 495 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 ZNF814B7Z6K7 855 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 GSTA4O15217 222 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 RAMP1O60894 148 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 LYZL6O75951 148 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 KRT33AO76009 404 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 LGI1O95970 557 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 IGHV3-9P01782 118 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 HRGP04196 525 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 C8BP07358 591 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 CBLP22681 906 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 HTR2AP28223 471 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 DNAJA1P31689 397 aaKnown RBP11.09□□□□□ -0.63
PTCD1-205ENST00000485746 LSP1P33241 339 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 PCBP3P57721 371 aaKnown RBP11.09□□□□□ -0.63
PTCD1-205ENST00000485746 H3F3AP84243 136 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 ITGADQ13349 1161 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 DUSP7Q16829 419 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 FBXW9Q5XUX1 488 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 FAM91A1Q658Y4 838 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 C5orf46Q6UWT4 87 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 Q6ZT83 130 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 ARPINQ7Z6K5 226 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 COMTD1Q86VU5 262 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 GABRG1Q8N1C3 465 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 MFSD8Q8NHS3 518 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 S100PBPQ96BU1 408 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 CMTM5Q96DZ9 223 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 EPYCQ99645 322 aa11.09□□□□□ -0.63
PTCD1-205ENST00000485746 ARHGDIGQ99819 225 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms