RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 NCF2P19878 526 aaPredicted RBP13.3□□□□□ -0.28
PRKN-207ENST00000479615 CCNA2P20248 432 aa13.3□□□□□ -0.28
PRKN-207ENST00000479615 IGHV1-2P23083 117 aa13.3□□□□□ -0.28
PRKN-207ENST00000479615 ACAA2P42765 397 aaKnown RBP13.3□□□□□ -0.28
PRKN-207ENST00000479615 IDH3AP50213 366 aa13.3□□□□□ -0.28
PRKN-207ENST00000479615 SLC17A1Q14916 467 aa13.3□□□□□ -0.28
PRKN-207ENST00000479615 TSC22D1Q15714 1073 aa13.3□□□□□ -0.28
PRKN-207ENST00000479615 STK11Q15831 433 aa13.3□□□□□ -0.28
PRKN-207ENST00000479615 ZNF311Q5JNZ3 666 aa13.3□□□□□ -0.28
PRKN-207ENST00000479615 ALKBH2Q6NS38 261 aa13.3□□□□□ -0.28
PRKN-207ENST00000479615 KLHL17Q6TDP4 642 aa13.3□□□□□ -0.28
PRKN-207ENST00000479615 ZNF836Q6ZNA1 936 aa13.3□□□□□ -0.28
PRKN-207ENST00000479615 ABHD12BQ7Z5M8 362 aaPredicted RBP13.3□□□□□ -0.28
PRKN-207ENST00000479615 VRK2Q86Y07 508 aa13.3□□□□□ -0.28
PRKN-207ENST00000479615 KRT73Q86Y46 540 aa13.3□□□□□ -0.28
PRKN-207ENST00000479615 C17orf78Q8N4C9 275 aa13.3□□□□□ -0.28
PRKN-207ENST00000479615 ZNF433Q8N7K0 673 aaPredicted RBP13.3□□□□□ -0.28
PRKN-207ENST00000479615 C1orf162Q8NEQ5 155 aaPredicted RBP13.3□□□□□ -0.28
PRKN-207ENST00000479615 BHLHE22Q8NFJ8 381 aaPredicted RBP13.3□□□□□ -0.28
PRKN-207ENST00000479615 STK35Q8TDR2 534 aa13.3□□□□□ -0.28
PRKN-207ENST00000479615 TMEM45BQ96B21 275 aa13.3□□□□□ -0.28
PRKN-207ENST00000479615 SPDL1Q96EA4 605 aa13.3□□□□□ -0.28
PRKN-207ENST00000479615 PERPQ96FX8 193 aa13.3□□□□□ -0.28
PRKN-207ENST00000479615 MUS81Q96NY9 551 aa13.3□□□□□ -0.28
PRKN-207ENST00000479615 GRIP2Q9C0E4 1043 aa13.3□□□□□ -0.28
PRKN-207ENST00000479615 EVA1AQ9H8M9 152 aa13.3□□□□□ -0.28
PRKN-207ENST00000479615 INTS9Q9NV88 658 aaKnown RBP13.3□□□□□ -0.28
PRKN-207ENST00000479615 RLIMQ9NVW2 624 aa13.3□□□□□ -0.28
PRKN-207ENST00000479615 DCTN4Q9UJW0 460 aa13.3□□□□□ -0.28
PRKN-207ENST00000479615 CCT8L1PA6NM43 557 aa13.29□□□□□ -0.28
PRKN-207ENST00000479615 CLOCKO15516 846 aa13.29□□□□□ -0.28
PRKN-207ENST00000479615 IMPDH2P12268 514 aa13.29□□□□□ -0.28
PRKN-207ENST00000479615 PRKAR1BP31321 381 aa13.29□□□□□ -0.28
PRKN-207ENST00000479615 AQP5P55064 265 aa13.29□□□□□ -0.28
PRKN-207ENST00000479615 ZNF672Q499Z4 452 aaPredicted RBP13.29□□□□□ -0.28
PRKN-207ENST00000479615 OTUD3Q5T2D3 398 aaPredicted RBP13.29□□□□□ -0.28
PRKN-207ENST00000479615 SLC2A7Q6PXP3 512 aa13.29□□□□□ -0.28
PRKN-207ENST00000479615 C5orf46Q6UWT4 87 aa13.29□□□□□ -0.28
PRKN-207ENST00000479615 TMEM108Q6UXF1 575 aa13.29□□□□□ -0.28
PRKN-207ENST00000479615 CCDC103Q8IW40 242 aa13.29□□□□□ -0.28
PRKN-207ENST00000479615 POMGNT2Q8NAT1 580 aa13.29□□□□□ -0.28
PRKN-207ENST00000479615 AURKBQ96GD4 344 aaPredicted RBP13.29□□□□□ -0.28
PRKN-207ENST00000479615 SIKE1Q9BRV8 207 aa13.29□□□□□ -0.28
PRKN-207ENST00000479615 C12orf10Q9HB07 376 aa13.29□□□□□ -0.28
PRKN-207ENST00000479615 SLCO1B3Q9NPD5 702 aa13.29□□□□□ -0.28
PRKN-207ENST00000479615 CCDC167Q9P0B6 97 aa13.29□□□□□ -0.28
PRKN-207ENST00000479615 UPB1Q9UBR1 384 aa13.29□□□□□ -0.28
PRKN-207ENST00000479615 TRIM33Q9UPN9 1127 aa13.29□□□□□ -0.28
PRKN-207ENST00000479615 MAGED1Q9Y5V3 778 aaPredicted RBP13.29□□□□□ -0.28
PRKN-207ENST00000479615 FLVCR1Q9Y5Y0 555 aa13.29□□□□□ -0.28
PRKN-207ENST00000479615 ACANP16112 2415 aa13.28□□□□□ -0.28
PRKN-207ENST00000479615 PRORSD1PA6NEY8 169 aa13.28□□□□□ -0.28
PRKN-207ENST00000479615 LIPT2A6NK58 231 aa13.28□□□□□ -0.28
PRKN-207ENST00000479615 EVPLLA8MZ36 301 aa13.28□□□□□ -0.28
PRKN-207ENST00000479615 PLAUP00749 431 aa13.28□□□□□ -0.28
PRKN-207ENST00000479615 GKN3PP0CG01 181 aa13.28□□□□□ -0.28
PRKN-207ENST00000479615 PTAFRP25105 342 aa13.28□□□□□ -0.28
PRKN-207ENST00000479615 BSPH1Q075Z2 132 aa13.28□□□□□ -0.28
PRKN-207ENST00000479615 CEACAM7Q14002 265 aa13.28□□□□□ -0.28
PRKN-207ENST00000479615 SQLEQ14534 574 aa13.28□□□□□ -0.28
PRKN-207ENST00000479615 GTDC1Q4AE62 458 aa13.28□□□□□ -0.28
PRKN-207ENST00000479615 TMEM225Q6GV28 225 aa13.28□□□□□ -0.28
PRKN-207ENST00000479615 REEP3Q6NUK4 255 aa13.28□□□□□ -0.28
PRKN-207ENST00000479615 DEPDC4Q8N2C3 294 aa13.28□□□□□ -0.28
PRKN-207ENST00000479615 CADM2Q8N3J6 435 aa13.28□□□□□ -0.28
PRKN-207ENST00000479615 SMAP2Q8WU79 429 aaPredicted RBP13.28□□□□□ -0.28
PRKN-207ENST00000479615 COX4I2Q96KJ9 171 aa13.28□□□□□ -0.28
PRKN-207ENST00000479615 MAGEB18Q96M61 343 aa13.28□□□□□ -0.28
PRKN-207ENST00000479615 Q96MF0 132 aa13.28□□□□□ -0.28
PRKN-207ENST00000479615 MRGBPQ9NV56 204 aa13.28□□□□□ -0.28
PRKN-207ENST00000479615 LAMP3Q9UQV4 416 aa13.28□□□□□ -0.28
PRKN-207ENST00000479615 ARID1AO14497 2285 aa13.28□□□□□ -0.28
PRKN-207ENST00000479615 ZFHX3Q15911 3703 aa13.27□□□□□ -0.29
PRKN-207ENST00000479615 A0A1W2PP18 115 aa13.27□□□□□ -0.29
PRKN-207ENST00000479615 DPRXA6NFQ7 191 aa13.27□□□□□ -0.29
PRKN-207ENST00000479615 AQP7P3A6NL99 342 aa13.27□□□□□ -0.29
PRKN-207ENST00000479615 OVOL3O00110 214 aa13.27□□□□□ -0.29
PRKN-207ENST00000479615 OR2T1O43869 369 aa13.27□□□□□ -0.29
PRKN-207ENST00000479615 SERPINB7O75635 380 aa13.27□□□□□ -0.29
PRKN-207ENST00000479615 HOXB9P17482 250 aaPredicted RBP13.27□□□□□ -0.29
PRKN-207ENST00000479615 ATP5J2P56134 94 aa13.27□□□□□ -0.29
PRKN-207ENST00000479615 FAPQ12884 760 aa13.27□□□□□ -0.29
PRKN-207ENST00000479615 OR7A5Q15622 319 aa13.27□□□□□ -0.29
PRKN-207ENST00000479615 TTMPQ5BVD1 217 aa13.27□□□□□ -0.29
PRKN-207ENST00000479615 GCNT6Q5T4J0 391 aa13.27□□□□□ -0.29
PRKN-207ENST00000479615 SEZ6L2Q6UXD5 910 aa13.27□□□□□ -0.29
PRKN-207ENST00000479615 CASP12Q6UXS9 341 aa13.27□□□□□ -0.29
PRKN-207ENST00000479615 FUNDC1Q8IVP5 155 aa13.27□□□□□ -0.29
PRKN-207ENST00000479615 CLIP4Q8N3C7 705 aa13.27□□□□□ -0.29
PRKN-207ENST00000479615 LSMEM1Q8N8F7 131 aa13.27□□□□□ -0.29
PRKN-207ENST00000479615 LILRB1Q8NHL6 650 aaPredicted RBP13.27□□□□□ -0.29
PRKN-207ENST00000479615 MFSD8Q8NHS3 518 aa13.27□□□□□ -0.29
PRKN-207ENST00000479615 TSPEARQ8WU66 669 aa13.27□□□□□ -0.29
PRKN-207ENST00000479615 BOD1Q96IK1 185 aa13.27□□□□□ -0.29
PRKN-207ENST00000479615 ZNF607Q96SK3 696 aa13.27□□□□□ -0.29
PRKN-207ENST00000479615 EBF4Q9BQW3 602 aa13.27□□□□□ -0.29
PRKN-207ENST00000479615 TRIM2Q9C040 744 aa13.27□□□□□ -0.29
PRKN-207ENST00000479615 AMBRA1Q9C0C7 1298 aa13.27□□□□□ -0.29
PRKN-207ENST00000479615 ALG2Q9H553 416 aa13.27□□□□□ -0.29
PRKN-207ENST00000479615 TMEM38AQ9H6F2 299 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms