RNA–Protein interactions for RNA: ENST00000479362.1

CDK11A-216, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-216ENST00000479362 TNFRSF11BO00300 401 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 TFECO14948 347 aaPredicted RBP9.37□□□□□ -0.91
CDK11A-216ENST00000479362 TRAPPC6AO75865 159 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 LYPD3O95274 346 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 NTN1O95631 604 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 ATP6V1G2O95670 118 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 PNMTP11086 282 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 ZNF17P17021 662 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 KLK2P20151 261 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 FPR1P21462 350 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 CXCR1P25024 350 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 ELK4P28324 431 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 APOBEC1P41238 236 aaKnown RBP9.37□□□□□ -0.91
CDK11A-216ENST00000479362 DLX5P56178 289 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 PPIAP62937 165 aaKnown RBP9.37□□□□□ -0.91
CDK11A-216ENST00000479362 TLE4Q04727 773 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 DGCR6Q14129 220 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 GK3PQ14409 553 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 EXOC3L2Q2M3D2 409 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 GLYR1Q49A26 553 aaPredicted RBP9.37□□□□□ -0.91
CDK11A-216ENST00000479362 SLC25A53Q5H9E4 307 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 RPUSD3Q6P087 351 aaKnown RBP9.37□□□□□ -0.91
CDK11A-216ENST00000479362 MRGPRGQ86SM5 289 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 ATG4DQ86TL0 474 aaPredicted RBP9.37□□□□□ -0.91
CDK11A-216ENST00000479362 YRDCQ86U90 279 aaKnown RBP9.37□□□□□ -0.91
CDK11A-216ENST00000479362 NKAIN4Q8IVV8 208 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 GTPBP8Q8N3Z3 284 aaPredicted RBP9.37□□□□□ -0.91
CDK11A-216ENST00000479362 ZNF808Q8N4W9 903 aaPredicted RBP9.37□□□□□ -0.91
CDK11A-216ENST00000479362 ICA1LQ8NDH6 482 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 FAM83FQ8NEG4 500 aaPredicted RBP9.37□□□□□ -0.91
CDK11A-216ENST00000479362 POC1BQ8TC44 478 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 SLC38A4Q969I6 547 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 CENPNQ96H22 339 aaPredicted RBP9.37□□□□□ -0.91
CDK11A-216ENST00000479362 CCDC120Q96HB5 630 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 MPP4Q96JB8 637 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 NPAS1Q99742 590 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 PIGQQ9BRB3 760 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 ADAM19Q9H013 955 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 C12orf10Q9HB07 376 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 OSGIN1Q9UJX0 560 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 TMCC3Q9ULS5 477 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 TMED7Q9Y3B3 224 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 U3KQV3 271 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 KIAA1549Q9HCM3 1950 aa9.37□□□□□ -0.91
CDK11A-216ENST00000479362 A0A087WUJ7 227 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 TRBV4-1A0A0J9YWV2 114 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 SAC3D1A6NKF1 404 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 SUSD5O60279 629 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 ZIC3O60481 467 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 CCNB2O95067 398 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 HPNP05981 417 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 CELA3AP09093 270 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 ZNF23P17027 643 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 CCNA2P20248 432 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 PTNP21246 168 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 FUT4P22083 530 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 ADH6P28332 368 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 DNAJA1P31689 397 aaKnown RBP9.36□□□□□ -0.91
CDK11A-216ENST00000479362 GCKP35557 465 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 RBM34P42696 430 aaKnown RBP9.36□□□□□ -0.91
CDK11A-216ENST00000479362 LIMS1P48059 325 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 IST1P53990 364 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 ALDH6A1Q02252 535 aaKnown RBP9.36□□□□□ -0.91
CDK11A-216ENST00000479362 LTBQ06643 244 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 PPP1R8Q12972 351 aaKnown RBP9.36□□□□□ -0.91
CDK11A-216ENST00000479362 SELENBP1Q13228 472 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 TMEM44Q2T9K0 475 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.36□□□□□ -0.91
CDK11A-216ENST00000479362 RNFT1Q5M7Z0 435 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 WIPI1Q5MNZ9 446 aaPredicted RBP9.36□□□□□ -0.91
CDK11A-216ENST00000479362 DCST1Q5T197 706 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 C3orf33Q6P1S2 294 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 TTC33Q6PID6 262 aaPredicted RBP9.36□□□□□ -0.91
CDK11A-216ENST00000479362 WDR88Q6ZMY6 472 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 SVOPLQ8N434 492 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 OR4C15Q8NGM1 316 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 OR5M1Q8NGP8 315 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 OR5K1Q8NHB7 308 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 SLC7A13Q8TCU3 470 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 TMEM255BQ8WV15 326 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 SDCCAG3Q96C92 435 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 HS6ST2Q96MM7 605 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 SFXN2Q96NB2 322 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 ALPK1Q96QP1 1244 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 SLX1AQ9BQ83 275 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 PRSS27Q9BQR3 290 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 CXXC4Q9H2H0 198 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 ZDHHC11Q9H8X9 412 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 NTN4Q9HB63 628 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 SERINC1Q9NRX5 453 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 NKX1-2Q9UD57 310 aaPredicted RBP9.36□□□□□ -0.91
CDK11A-216ENST00000479362 CHRNA9Q9UGM1 479 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 MRPS18CQ9Y3D5 142 aaKnown RBP9.36□□□□□ -0.91
CDK11A-216ENST00000479362 SPIN1Q9Y657 262 aaPredicted RBP9.36□□□□□ -0.91
CDK11A-216ENST00000479362 DNAJC13O75165 2243 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 ZNF407Q9C0G0 2248 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 MED12Q93074 2177 aa9.36□□□□□ -0.91
CDK11A-216ENST00000479362 A0A087WUU8 490 aa9.35□□□□□ -0.91
CDK11A-216ENST00000479362 TMEM72A0PK05 275 aa9.35□□□□□ -0.91
CDK11A-216ENST00000479362 SH3PXD2BA1X283 911 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms