RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 SLC25A18Q9H1K4 315 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 TSPAN10Q9H1Z9 355 aaPredicted RBP19.6■□□□□ 0.73
SDF4-206ENST00000478938 PPP1R14DQ9NXH3 145 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 ANKRD10Q9NXR5 420 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 PLXNA3P51805 1871 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 NLRC5Q86WI3 1866 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.6■□□□□ 0.73
SDF4-206ENST00000478938 MAGEB4O15481 346 aaPredicted RBP19.6■□□□□ 0.73
SDF4-206ENST00000478938 KLK1P06870 262 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 CD53P19397 219 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 BUD31P41223 144 aaPredicted RBP19.6■□□□□ 0.73
SDF4-206ENST00000478938 RBP2P50120 134 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 RNF4P78317 190 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 SPRYD7Q5W111 196 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 RNF113BQ8IZP6 322 aaKnown RBP19.6■□□□□ 0.73
SDF4-206ENST00000478938 OR10R2Q8NGX6 335 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 TEAD3Q99594 435 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 ADARB2Q9NS39 739 aaKnown RBP19.6■□□□□ 0.73
SDF4-206ENST00000478938 SCML2Q9UQR0 700 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 CDK2P24941 298 aa19.59■□□□□ 0.73
SDF4-206ENST00000478938 GABRR2P28476 465 aa19.59■□□□□ 0.73
SDF4-206ENST00000478938 HGFACQ04756 655 aa19.59■□□□□ 0.73
SDF4-206ENST00000478938 ZNF345Q14585 488 aa19.59■□□□□ 0.73
SDF4-206ENST00000478938 KRBOX4Q5JUW0 171 aa19.59■□□□□ 0.73
SDF4-206ENST00000478938 DMKNQ6E0U4 476 aaPredicted RBP19.59■□□□□ 0.73
SDF4-206ENST00000478938 NIPAL3Q6P499 406 aa19.59■□□□□ 0.73
SDF4-206ENST00000478938 EID2Q8N6I1 236 aa19.59■□□□□ 0.73
SDF4-206ENST00000478938 NLGN2Q8NFZ4 835 aa19.59■□□□□ 0.73
SDF4-206ENST00000478938 OSTF1Q92882 214 aa19.59■□□□□ 0.73
SDF4-206ENST00000478938 S100PBPQ96BU1 408 aa19.59■□□□□ 0.73
SDF4-206ENST00000478938 SUV39H2Q9H5I1 410 aa19.59■□□□□ 0.73
SDF4-206ENST00000478938 CCDC86Q9H6F5 360 aaKnown RBP19.59■□□□□ 0.73
SDF4-206ENST00000478938 MIEF1Q9NQG6 463 aa19.59■□□□□ 0.73
SDF4-206ENST00000478938 NT5EP21589 574 aa19.59■□□□□ 0.73
SDF4-206ENST00000478938 PAX6P26367 422 aa19.59■□□□□ 0.73
SDF4-206ENST00000478938 TRHRP34981 398 aaPredicted RBP19.59■□□□□ 0.73
SDF4-206ENST00000478938 OMPP47874 163 aa19.59■□□□□ 0.73
SDF4-206ENST00000478938 CDH4P55283 916 aa19.59■□□□□ 0.73
SDF4-206ENST00000478938 HSPB3Q12988 150 aa19.59■□□□□ 0.73
SDF4-206ENST00000478938 UPP1Q16831 310 aa19.59■□□□□ 0.73
SDF4-206ENST00000478938 PCGF3Q3KNV8 242 aa19.59■□□□□ 0.73
SDF4-206ENST00000478938 SZRD1Q7Z422 152 aa19.59■□□□□ 0.73
SDF4-206ENST00000478938 SYNPRQ8TBG9 265 aa19.59■□□□□ 0.73
SDF4-206ENST00000478938 NEU1Q99519 415 aa19.59■□□□□ 0.73
SDF4-206ENST00000478938 GFI1Q99684 422 aa19.59■□□□□ 0.73
SDF4-206ENST00000478938 SLITRK2Q9H156 845 aa19.59■□□□□ 0.73
SDF4-206ENST00000478938 KLF15Q9UIH9 416 aa19.59■□□□□ 0.73
SDF4-206ENST00000478938 NOD1Q9Y239 953 aa19.59■□□□□ 0.73
SDF4-206ENST00000478938 DNAJC25-GNG10A0A024R161 153 aa19.58■□□□□ 0.73
SDF4-206ENST00000478938 CPED1A4D0V7 1026 aa19.58■□□□□ 0.73
SDF4-206ENST00000478938 YIF1AO95070 293 aa19.58■□□□□ 0.73
SDF4-206ENST00000478938 SFTA3P0C7M3 94 aa19.58■□□□□ 0.73
SDF4-206ENST00000478938 CD79AP11912 226 aa19.58■□□□□ 0.73
SDF4-206ENST00000478938 CASRP41180 1078 aa19.58■□□□□ 0.73
SDF4-206ENST00000478938 TAS2R41P59536 307 aa19.58■□□□□ 0.73
SDF4-206ENST00000478938 MRPL58Q14197 206 aaKnown RBP19.58■□□□□ 0.73
SDF4-206ENST00000478938 C9orf131Q5VYM1 1079 aa19.58■□□□□ 0.73
SDF4-206ENST00000478938 REC114Q7Z4M0 266 aa19.58■□□□□ 0.73
SDF4-206ENST00000478938 SAMD8Q96LT4 415 aa19.58■□□□□ 0.73
SDF4-206ENST00000478938 TEX12Q9BXU0 123 aa19.58■□□□□ 0.73
SDF4-206ENST00000478938 CHRDQ9H2X0 955 aa19.58■□□□□ 0.73
SDF4-206ENST00000478938 PRDM13Q9H4Q3 707 aa19.58■□□□□ 0.73
SDF4-206ENST00000478938 PISDQ9UG56 409 aa19.58■□□□□ 0.73
SDF4-206ENST00000478938 CPSF4LA6NMK7 179 aaKnown RBP19.58■□□□□ 0.72
SDF4-206ENST00000478938 ADM5C9JUS6 153 aa19.58■□□□□ 0.72
SDF4-206ENST00000478938 NPIPB9F8W1W9 429 aa19.58■□□□□ 0.72
SDF4-206ENST00000478938 ACOT7O00154 380 aa19.58■□□□□ 0.72
SDF4-206ENST00000478938 DPP4P27487 766 aa19.58■□□□□ 0.72
SDF4-206ENST00000478938 CERS1P27544 350 aa19.58■□□□□ 0.72
SDF4-206ENST00000478938 GRK4P32298 578 aa19.58■□□□□ 0.72
SDF4-206ENST00000478938 PPP2CBP62714 309 aa19.58■□□□□ 0.72
SDF4-206ENST00000478938 PPP2CAP67775 309 aa19.58■□□□□ 0.72
SDF4-206ENST00000478938 PARGQ86W56 976 aa19.58■□□□□ 0.72
SDF4-206ENST00000478938 ZNF433Q8N7K0 673 aaPredicted RBP19.58■□□□□ 0.72
SDF4-206ENST00000478938 STEAP2Q8NFT2 490 aa19.58■□□□□ 0.72
SDF4-206ENST00000478938 RNASE11Q8TAA1 199 aaKnown RBP19.58■□□□□ 0.72
SDF4-206ENST00000478938 FKRPQ9H9S5 495 aa19.58■□□□□ 0.72
SDF4-206ENST00000478938 APMAPQ9HDC9 416 aa19.58■□□□□ 0.72
SDF4-206ENST00000478938 PPP4R1LQ9P1A2 415 aa19.58■□□□□ 0.72
SDF4-206ENST00000478938 A0A0C4DFX4 3053 aa19.58■□□□□ 0.72
SDF4-206ENST00000478938 A0A1W2PPH5 198 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 STMND1H3BQB6 276 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 CNMDO75829 334 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 FGF19O95750 216 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 MT-ND4LP03901 98 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 PRG2P13727 222 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 DPEP1P16444 411 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 CCSMST1Q4G0I0 132 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 C11orf87Q6NUJ2 197 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 FAM83HQ6ZRV2 1179 aaPredicted RBP19.57■□□□□ 0.72
SDF4-206ENST00000478938 RFLNBQ8N5W9 214 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 OR51S1Q8NGJ8 323 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 XAGE5Q8WWM1 108 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 CLP1Q92989 425 aaKnown RBP19.57■□□□□ 0.72
SDF4-206ENST00000478938 PIGQQ9BRB3 760 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 TMEM27Q9HBJ8 222 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 MMP26Q9NRE1 261 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 POT1Q9NUX5 634 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 C5AR2Q9P296 337 aa19.57■□□□□ 0.72
SDF4-206ENST00000478938 CACNB4O00305 520 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms