RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 TRIM3O75382 744 aaPredicted RBP15.08■□□□□ 0
TMEM53-208ENST00000476724 IGF2P01344 180 aa15.08■□□□□ 0
TMEM53-208ENST00000476724 CD1AP06126 327 aa15.08■□□□□ 0
TMEM53-208ENST00000476724 GIMD1P0DJR0 217 aa15.08■□□□□ 0
TMEM53-208ENST00000476724 SPTBP11277 2137 aa15.08■□□□□ 0
TMEM53-208ENST00000476724 MYF5P13349 255 aa15.08■□□□□ 0
TMEM53-208ENST00000476724 GFERP55789 205 aa15.08■□□□□ 0
TMEM53-208ENST00000476724 BTG2P78543 158 aa15.08■□□□□ 0
TMEM53-208ENST00000476724 E2F1Q01094 437 aa15.08■□□□□ 0
TMEM53-208ENST00000476724 C14orf28Q4W4Y0 310 aa15.08■□□□□ 0
TMEM53-208ENST00000476724 TCTE1Q5JU00 501 aa15.08■□□□□ 0
TMEM53-208ENST00000476724 NKAIN2Q5VXU1 208 aa15.08■□□□□ 0
TMEM53-208ENST00000476724 NR2C2APQ86WQ0 139 aa15.08■□□□□ 0
TMEM53-208ENST00000476724 MAML2Q8IZL2 1156 aaPredicted RBP15.08■□□□□ 0
TMEM53-208ENST00000476724 CAPSLQ8WWF8 208 aa15.08■□□□□ 0
TMEM53-208ENST00000476724 PRMT8Q9NR22 394 aaPredicted RBP15.08■□□□□ 0
TMEM53-208ENST00000476724 FBXL4Q9UKA2 621 aa15.08■□□□□ 0
TMEM53-208ENST00000476724 ERVK-19Q9WJR5 959 aa15.08■□□□□ 0
TMEM53-208ENST00000476724 ZNF337Q9Y3M9 751 aa15.08■□□□□ 0
TMEM53-208ENST00000476724 CABIN1Q9Y6J0 2220 aa15.08■□□□□ 0
TMEM53-208ENST00000476724 SPEGQ15772 3267 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 TRAV1-2A0A0B4J238 106 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 FAM240BA0A1B0GVZ2 78 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 A8MU76 341 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 DVL2O14641 736 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 CDC123O75794 336 aaPredicted RBP15.07■□□□□ 0
TMEM53-208ENST00000476724 HIST1H1CP16403 213 aaKnown RBP15.07■□□□□ 0
TMEM53-208ENST00000476724 RBMS1P29558 406 aaKnown RBP15.07■□□□□ 0
TMEM53-208ENST00000476724 HOXA6P31267 233 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 PYCR1P32322 319 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 ADH7P40394 386 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 PPM1FP49593 454 aaPredicted RBP15.07■□□□□ 0
TMEM53-208ENST00000476724 GBX2P52951 348 aaPredicted RBP15.07■□□□□ 0
TMEM53-208ENST00000476724 MAT1AQ00266 395 aaKnown RBP15.07■□□□□ 0
TMEM53-208ENST00000476724 PON3Q15166 354 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 SHBQ15464 509 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 ACSM3Q53FZ2 586 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 SLC35D3Q5M8T2 416 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 LYSMD4Q5XG99 296 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 SFXN4Q6P4A7 337 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 ZNF615Q8N8J6 731 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 NLGN4YQ8NFZ3 816 aaPredicted RBP15.07■□□□□ 0
TMEM53-208ENST00000476724 OR7G1Q8NGA0 311 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 ARSGQ96EG1 525 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 CNN2Q99439 309 aaKnown RBP15.07■□□□□ 0
TMEM53-208ENST00000476724 CHRNA10Q9GZZ6 450 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 B3GAT2Q9NPZ5 323 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 ENAMQ9NRM1 1142 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 LRIT1Q9P2V4 623 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 IER3IP1Q9Y5U9 82 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 RNF215Q9Y6U7 377 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 ARID1BQ8NFD5 2236 aaPredicted RBP15.07■□□□□ 0
TMEM53-208ENST00000476724 CACNA1EQ15878 2313 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 CCDC163A0A0D9SF12 145 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 FAM172BPA6NC97 362 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 H0YIG0 161 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 GYPBP06028 91 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 NPR2P20594 1047 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 THBS2P35442 1172 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 GABRA4P48169 554 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 PRPS1P60891 318 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 CSTF1Q05048 431 aaKnown RBP15.07■□□□□ 0
TMEM53-208ENST00000476724 HACD4Q5VWC8 232 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 PMS2CLQ68D20 193 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 OR4K13Q8NH42 304 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 GHSRQ92847 366 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 MMABQ96EY8 250 aaPredicted RBP15.07■□□□□ 0
TMEM53-208ENST00000476724 MFRPQ9BY79 579 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 PPIL3Q9H2H8 161 aaKnown RBP15.07■□□□□ 0
TMEM53-208ENST00000476724 FSCN3Q9NQT6 498 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 EPHA6Q9UF33 1036 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 ST6GALNAC2Q9UJ37 374 aa15.07■□□□□ 0
TMEM53-208ENST00000476724 OR7A10O76100 309 aa15.06■□□□□ 0
TMEM53-208ENST00000476724 IFNA16P05015 189 aa15.06■□□□□ 0
TMEM53-208ENST00000476724 GSTT2P0CG29 244 aa15.06■□□□□ 0
TMEM53-208ENST00000476724 GSTT2BP0CG30 244 aa15.06■□□□□ 0
TMEM53-208ENST00000476724 FAM157BP0CG42 384 aa15.06■□□□□ 0
TMEM53-208ENST00000476724 PSKH1P11801 424 aa15.06■□□□□ 0
TMEM53-208ENST00000476724 RPL4P36578 427 aaKnown RBP15.06■□□□□ 0
TMEM53-208ENST00000476724 DIO1P49895 249 aa15.06■□□□□ 0
TMEM53-208ENST00000476724 PGDP52209 483 aa15.06■□□□□ 0
TMEM53-208ENST00000476724 IFITM2Q01629 132 aa15.06■□□□□ 0
TMEM53-208ENST00000476724 ERV3-1Q14264 604 aa15.06■□□□□ 0
TMEM53-208ENST00000476724 CDONQ4KMG0 1287 aa15.06■□□□□ 0
TMEM53-208ENST00000476724 CCDC58Q4VC31 144 aa15.06■□□□□ 0
TMEM53-208ENST00000476724 KLHL26Q53HC5 615 aa15.06■□□□□ 0
TMEM53-208ENST00000476724 TMEM53Q6P2H8 277 aa15.06■□□□□ 0
TMEM53-208ENST00000476724 WDR5BQ86VZ2 330 aa15.06■□□□□ 0
TMEM53-208ENST00000476724 SLITRK4Q8IW52 837 aa15.06■□□□□ 0
TMEM53-208ENST00000476724 C17orf47Q8NEP4 570 aa15.06■□□□□ 0
TMEM53-208ENST00000476724 SDR9C7Q8NEX9 313 aa15.06■□□□□ 0
TMEM53-208ENST00000476724 OR4C3Q8NH37 302 aa15.06■□□□□ 0
TMEM53-208ENST00000476724 OR14A16Q8NHC5 309 aa15.06■□□□□ 0
TMEM53-208ENST00000476724 TP63Q9H3D4 680 aaPredicted RBP15.06■□□□□ 0
TMEM53-208ENST00000476724 ASXL3Q9C0F0 2248 aa15.06■□□□□ 0
TMEM53-208ENST00000476724 MCIDASD6RGH6 385 aa15.05■□□□□ 0
TMEM53-208ENST00000476724 GATBO75879 557 aaKnown RBP15.05■□□□□ 0
TMEM53-208ENST00000476724 ARL6IP5O75915 188 aa15.05■□□□□ 0
TMEM53-208ENST00000476724 PNMTP11086 282 aa15.05■□□□□ 0
TMEM53-208ENST00000476724 RAB3BP20337 219 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms