RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 UGT2A1Q9Y4X1 527 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 KIF25-AS1Q9Y6Z4 181 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 THSD7BQ9C0I4 1608 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 TP53BP1Q12888 1972 aaPredicted RBP4.23□□□□□ -1.73
VPS50-212ENST00000476413 ADAMTS9Q9P2N4 1935 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 A0A1W2PPV9 198 aa4.22□□□□□ -1.73
VPS50-212ENST00000476413 AP3B1O00203 1094 aa4.22□□□□□ -1.73
VPS50-212ENST00000476413 ETS2P15036 469 aa4.22□□□□□ -1.73
VPS50-212ENST00000476413 SLC26A2P50443 739 aa4.22□□□□□ -1.73
VPS50-212ENST00000476413 CDH4P55283 916 aa4.22□□□□□ -1.73
VPS50-212ENST00000476413 PKNOX1P55347 436 aa4.22□□□□□ -1.73
VPS50-212ENST00000476413 ZNF763Q0D2J5 394 aa4.22□□□□□ -1.73
VPS50-212ENST00000476413 BCL7AQ4VC05 210 aa4.22□□□□□ -1.73
VPS50-212ENST00000476413 OR52E8Q6IFG1 317 aa4.22□□□□□ -1.73
VPS50-212ENST00000476413 PGAP1Q75T13 922 aa4.22□□□□□ -1.73
VPS50-212ENST00000476413 SLC22A9Q8IVM8 553 aa4.22□□□□□ -1.73
VPS50-212ENST00000476413 CDH26Q8IXH8 852 aa4.22□□□□□ -1.73
VPS50-212ENST00000476413 RDH10Q8IZV5 341 aa4.22□□□□□ -1.73
VPS50-212ENST00000476413 C6orf223Q8N319 242 aa4.22□□□□□ -1.73
VPS50-212ENST00000476413 TMEM252Q8N6L7 170 aa4.22□□□□□ -1.73
VPS50-212ENST00000476413 BBS1Q8NFJ9 593 aa4.22□□□□□ -1.73
VPS50-212ENST00000476413 OR4K14Q8NGD5 310 aa4.22□□□□□ -1.73
VPS50-212ENST00000476413 C7orf33Q8WU49 177 aa4.22□□□□□ -1.73
VPS50-212ENST00000476413 DNAJA4Q8WW22 397 aaPredicted RBP4.22□□□□□ -1.73
VPS50-212ENST00000476413 UFD1Q92890 307 aa4.22□□□□□ -1.73
VPS50-212ENST00000476413 FGF11Q92914 225 aa4.22□□□□□ -1.73
VPS50-212ENST00000476413 PAGE5Q96GU1 130 aa4.22□□□□□ -1.73
VPS50-212ENST00000476413 TECTBQ96PL2 329 aa4.22□□□□□ -1.73
VPS50-212ENST00000476413 TCHPQ9BT92 498 aa4.22□□□□□ -1.73
VPS50-212ENST00000476413 RBKSQ9H477 322 aa4.22□□□□□ -1.73
VPS50-212ENST00000476413 COPS3Q9UNS2 423 aa4.22□□□□□ -1.73
VPS50-212ENST00000476413 KANK1Q14678 1352 aa4.22□□□□□ -1.73
VPS50-212ENST00000476413 SH3TC1Q8TE82 1336 aa4.21□□□□□ -1.73
VPS50-212ENST00000476413 IGHV1OR21-1A0A087WYE8 117 aa4.21□□□□□ -1.74
VPS50-212ENST00000476413 IGKV3-15P01624 115 aa4.21□□□□□ -1.74
VPS50-212ENST00000476413 MX1P20591 662 aa4.21□□□□□ -1.74
VPS50-212ENST00000476413 KLK7P49862 253 aa4.21□□□□□ -1.74
VPS50-212ENST00000476413 OGDHQ02218 1023 aa4.21□□□□□ -1.74
VPS50-212ENST00000476413 ASPHQ12797 758 aa4.21□□□□□ -1.74
VPS50-212ENST00000476413 GK3PQ14409 553 aa4.21□□□□□ -1.74
VPS50-212ENST00000476413 OXA1LQ15070 435 aa4.21□□□□□ -1.74
VPS50-212ENST00000476413 KYAT1Q16773 422 aa4.21□□□□□ -1.74
VPS50-212ENST00000476413 CCDC183Q5T5S1 534 aa4.21□□□□□ -1.74
VPS50-212ENST00000476413 H2BFWTQ7Z2G1 175 aa4.21□□□□□ -1.74
VPS50-212ENST00000476413 VRK2Q86Y07 508 aa4.21□□□□□ -1.74
VPS50-212ENST00000476413 CCDC65Q8IXS2 484 aa4.21□□□□□ -1.74
VPS50-212ENST00000476413 C14orf178Q8N769 122 aaPredicted RBP4.21□□□□□ -1.74
VPS50-212ENST00000476413 TUBGCP3Q96CW5 907 aa4.21□□□□□ -1.74
VPS50-212ENST00000476413 SEC22AQ96IW7 307 aa4.21□□□□□ -1.74
VPS50-212ENST00000476413 CLCC1Q96S66 551 aa4.21□□□□□ -1.74
VPS50-212ENST00000476413 ARHGDIGQ99819 225 aa4.21□□□□□ -1.74
VPS50-212ENST00000476413 MAPKAP1Q9BPZ7 522 aa4.21□□□□□ -1.74
VPS50-212ENST00000476413 MRPL45Q9BRJ2 306 aaKnown RBP4.21□□□□□ -1.74
VPS50-212ENST00000476413 ANKRD19PQ9H560 264 aa4.21□□□□□ -1.74
VPS50-212ENST00000476413 FOLH1BQ9HBA9 442 aa4.21□□□□□ -1.74
VPS50-212ENST00000476413 HOXC10Q9NYD6 342 aa4.21□□□□□ -1.74
VPS50-212ENST00000476413 SUN2Q9UH99 717 aa4.21□□□□□ -1.74
VPS50-212ENST00000476413 RPL36Q9Y3U8 105 aaKnown RBP4.21□□□□□ -1.74
VPS50-212ENST00000476413 ZNF646O15015 1829 aaPredicted RBP4.21□□□□□ -1.74
VPS50-212ENST00000476413 TTC21BQ7Z4L5 1316 aa4.21□□□□□ -1.74
VPS50-212ENST00000476413 PLEKHH1Q9ULM0 1364 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 CYSRT1A8MQ03 144 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 HAS3O00219 553 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 MBTPS2O43462 519 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 ATP1B2P14415 290 aaPredicted RBP4.2□□□□□ -1.74
VPS50-212ENST00000476413 SHMT2P34897 504 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 RDXP35241 583 aaKnown RBP4.2□□□□□ -1.74
VPS50-212ENST00000476413 NDPQ00604 133 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 KCTD21Q4G0X4 260 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 C11orf71Q6IPW1 123 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 SCARA5Q6ZMJ2 495 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 IL34Q6ZMJ4 242 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 TMEM179BQ7Z7N9 219 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 NBPF5PQ86XG9 351 aaPredicted RBP4.2□□□□□ -1.74
VPS50-212ENST00000476413 EGFL6Q8IUX8 553 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 FTMTQ8N4E7 242 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 OR9A1PQ8NGU1 263 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 CXorf40BQ96DE9 158 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 C16orf74Q96GX8 76 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 TCEANC2Q96MN5 208 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 NICN1Q9BSH3 213 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 CHRDL1Q9BU40 450 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 YTHDF1Q9BYJ9 559 aaKnown RBP4.2□□□□□ -1.74
VPS50-212ENST00000476413 C20orf85Q9H1P6 137 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 ZDHHC11Q9H8X9 412 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 ISG20L2Q9H9L3 353 aaKnown RBP4.2□□□□□ -1.74
VPS50-212ENST00000476413 PLSCR3Q9NRY6 295 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 DCAF16Q9NXF7 216 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 THUMPD1Q9NXG2 353 aaKnown RBP4.2□□□□□ -1.74
VPS50-212ENST00000476413 CD274Q9NZQ7 290 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 TP53TG3Q9ULZ0 132 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 IFT52Q9Y366 437 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 NPTNQ9Y639 398 aa4.2□□□□□ -1.74
VPS50-212ENST00000476413 CROCCQ5TZA2 2017 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 TNRQ92752 1358 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 IGHV3OR16-13A0A075B7E8 117 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 IQANK1A0A1B0GTG1 560 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 A8MXQ7 604 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 H0Y8G0 127 aa4.19□□□□□ -1.74
VPS50-212ENST00000476413 UGT1A9O60656 530 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms