RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 MAD2L1Q13257 205 aaPredicted RBP3.19□□□□□ -1.9
UBR3-208ENST00000474426 ABRAXAS2Q15018 415 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 PTGES3Q15185 160 aaKnown RBP3.19□□□□□ -1.9
UBR3-208ENST00000474426 TATDN3Q17R31 274 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 SPDYE7PQ495Y7 208 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 OCIAD2Q56VL3 154 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 KHDC1LQ5JSQ8 128 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 DGAT2L7PQ6IED9 249 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 FRMD7Q6ZUT3 714 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 MOB2Q70IA6 237 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 SERPINA9Q86WD7 417 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 DTX1Q86Y01 620 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 ARIH2OSQ8N7S6 290 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 SDR9C7Q8NEX9 313 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 ZCCHC10Q8TBK6 192 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 PIH1D2Q8WWB5 315 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 HPSE2Q8WWQ2 592 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 GLYATL1Q969I3 302 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 TOMM40LQ969M1 308 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 TRMT61AQ96FX7 289 aaKnown RBP3.19□□□□□ -1.9
UBR3-208ENST00000474426 TGM7Q96PF1 710 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 TIMM29Q9BSF4 260 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 FSD1LQ9BXM9 530 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 ZNF385DQ9H6B1 395 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 GREM2Q9H772 168 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 MSL2Q9HCI7 577 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 SLAMF7Q9NQ25 335 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 NLE1Q9NVX2 485 aaPredicted RBP3.19□□□□□ -1.9
UBR3-208ENST00000474426 SLC2A8Q9NY64 477 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 RASL12Q9NYN1 266 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 FOXJ2Q9P0K8 574 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 TMEM181Q9P2C4 612 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 TMEFF2Q9UIK5 374 aaPredicted RBP3.19□□□□□ -1.9
UBR3-208ENST00000474426 CDH22Q9UJ99 828 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 RAB26Q9ULW5 256 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 ZFP30Q9Y2G7 519 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 UFC1Q9Y3C8 167 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 A0A1B0GUL6 1792 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 CROCC2H7BZ55 1655 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 PYCARD-AS1I3L0S3 204 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 ICOSLGO75144 302 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 OR2B3O76000 313 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 KRT33AO76009 404 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 MOCS3O95396 460 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 HPP00738 406 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 HPRP00739 348 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 IRF2P14316 349 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 AMD1P17707 334 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 GPX2P18283 190 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 MAGEA12P43365 314 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 RPS9P46781 194 aaKnown RBP3.19□□□□□ -1.9
UBR3-208ENST00000474426 CDH11P55287 796 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 FABP9Q0Z7S8 132 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 NFATC3Q12968 1075 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 PPP1R8Q12972 351 aaKnown RBP3.19□□□□□ -1.9
UBR3-208ENST00000474426 CLINT1Q14677 625 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 GUCA2BQ16661 112 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 PLPPR5Q32ZL2 321 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 C9orf135Q5VTT2 229 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 C9orf84Q5VXU9 1444 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 TMEM198Q66K66 360 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 ZNF585AQ6P3V2 769 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 BLOC1S3Q6QNY0 202 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 TMEM179Q6ZVK1 233 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 BAP18Q8IXM2 172 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 MFSD4AQ8N468 514 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 LRRC52Q8N7C0 313 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 GDPD1Q8N9F7 314 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 OR4C5Q8NGB2 326 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 OR56A1Q8NGH5 318 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 SMARCD2Q92925 531 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 MMABQ96EY8 250 aaPredicted RBP3.19□□□□□ -1.9
UBR3-208ENST00000474426 CELF6Q96J87 481 aaKnown RBP3.19□□□□□ -1.9
UBR3-208ENST00000474426 TBX5Q99593 518 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 OSBPL11Q9BXB4 747 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 FTHL17Q9BXU8 183 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 DUSP16Q9BY84 665 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 KCNK15Q9H427 330 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 UBTD1Q9HAC8 227 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 B3GAT1Q9P2W7 334 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 RNF14Q9UBS8 474 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 COPS7AQ9UBW8 275 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 B9D1Q9UPM9 204 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 PSG8Q9UQ74 426 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 WDR45Q9Y484 360 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 DIP2BQ9P265 1576 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 CD109Q6YHK3 1445 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 SPATA31A6Q5VVP1 1343 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 A0A096LPI6 279 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 PRORSD1PA6NEY8 169 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 M0R143 59 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 GYG2O15488 501 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 AIREO43918 545 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 JCHAINP01591 159 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 ALPLP05186 524 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 ARL4DP49703 201 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 RORCP51449 518 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 MS4A2Q01362 244 aa3.19□□□□□ -1.9
UBR3-208ENST00000474426 EMX1Q04741 257 aaPredicted RBP3.19□□□□□ -1.9
UBR3-208ENST00000474426 MXD1Q05195 221 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms