RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 PRR23D2P0DMB1 279 aaPredicted RBP16.36■□□□□ 0.21
VARS2-206ENST00000473916 CDK4P11802 303 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 GP1BBP13224 206 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 INPP5JQ15735 1006 aaPredicted RBP16.36■□□□□ 0.21
VARS2-206ENST00000473916 CDCP2Q5VXM1 449 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 RNLSQ5VYX0 342 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 MEPCEQ7L2J0 689 aaKnown RBP16.36■□□□□ 0.21
VARS2-206ENST00000473916 OR11G2Q8NGC1 345 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 TM9SF4Q92544 642 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 RASD2Q96D21 266 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 IMMP1LQ96LU5 166 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 CHCHD6Q9BRQ6 235 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 ZNF649Q9BS31 505 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 STRADBQ9C0K7 418 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 ZNF700Q9H0M5 742 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 NANSQ9NR45 359 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 FOXJ2Q9P0K8 574 aa16.36■□□□□ 0.21
VARS2-206ENST00000473916 CELSR3Q9NYQ7 3312 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 SLC22A1O15245 554 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 SERPINI2O75830 405 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 SCG5P05408 212 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 CYC1P08574 325 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 MRPL3P09001 348 aaKnown RBP16.35■□□□□ 0.21
VARS2-206ENST00000473916 MYL12AP19105 171 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 SLC2A5P22732 501 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 CXCR1P25024 350 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 PTGDSP41222 190 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 SLC16A1P53985 500 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 ARSKQ6UWY0 536 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 TMEM99Q8N816 258 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 GATAD2BQ8WXI9 593 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 CCNL2Q96S94 520 aaPredicted RBP16.35■□□□□ 0.21
VARS2-206ENST00000473916 KATNB1Q9BVA0 655 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 PARD6AQ9NPB6 346 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 TAS2R10Q9NYW0 307 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 PCDHGA3Q9Y5H0 932 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 MED12Q93074 2177 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 TMEM72A0PK05 275 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 SHISA8B8ZZ34 492 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 CCRL2O00421 344 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 DKK1O94907 266 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 ASAH2BP0C7U1 165 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 JMJD7P0C870 316 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 HK1P19367 917 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 FOLR3P41439 243 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 RPS7P62081 194 aaKnown RBP16.35■□□□□ 0.21
VARS2-206ENST00000473916 ZNF791Q3KP31 576 aaPredicted RBP16.35■□□□□ 0.21
VARS2-206ENST00000473916 ARHGAP11AQ6P4F7 1023 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 ADGRG3Q86Y34 549 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 GID4Q8IVV7 300 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 OR51L1Q8NGJ5 315 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 CT55Q8WUE5 264 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 TMCO6Q96DC7 493 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 TBX5Q99593 518 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 BCL7BQ9BQE9 202 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 OR11A1Q9GZK7 315 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 ZNF160Q9HCG1 818 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 KLRF1Q9NZS2 232 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 EXOGQ9Y2C4 368 aaKnown RBP16.35■□□□□ 0.21
VARS2-206ENST00000473916 PMF1-BGLAPU3KQ54 211 aa16.35■□□□□ 0.21
VARS2-206ENST00000473916 TMED7-TICAM2A0A0A6YYA0 188 aa16.34■□□□□ 0.21
VARS2-206ENST00000473916 SUSD5O60279 629 aa16.34■□□□□ 0.21
VARS2-206ENST00000473916 ITGA10O75578 1167 aa16.34■□□□□ 0.21
VARS2-206ENST00000473916 LALBAP00709 142 aa16.34■□□□□ 0.21
VARS2-206ENST00000473916 F13BP05160 661 aa16.34■□□□□ 0.21
VARS2-206ENST00000473916 FBXO45P0C2W1 286 aa16.34■□□□□ 0.21
VARS2-206ENST00000473916 ZNF3P17036 446 aa16.34■□□□□ 0.21
VARS2-206ENST00000473916 TCN2P20062 427 aa16.34■□□□□ 0.21
VARS2-206ENST00000473916 ATP6V1E1P36543 226 aa16.34■□□□□ 0.21
VARS2-206ENST00000473916 CLK1P49759 484 aaKnown RBP16.34■□□□□ 0.21
VARS2-206ENST00000473916 RAB15P59190 212 aa16.34■□□□□ 0.21
VARS2-206ENST00000473916 PSPHP78330 225 aa16.34■□□□□ 0.21
VARS2-206ENST00000473916 LIPKQ5VXJ0 399 aa16.34■□□□□ 0.21
VARS2-206ENST00000473916 C19orf48Q6RUI8 117 aa16.34■□□□□ 0.21
VARS2-206ENST00000473916 C6orf15Q6UXA7 325 aaPredicted RBP16.34■□□□□ 0.21
VARS2-206ENST00000473916 ZFP41Q8N8Y5 198 aa16.34■□□□□ 0.21
VARS2-206ENST00000473916 FAM98AQ8NCA5 519 aaKnown RBP16.34■□□□□ 0.21
VARS2-206ENST00000473916 DYNC2LI1Q8TCX1 351 aa16.34■□□□□ 0.21
VARS2-206ENST00000473916 RNF138Q8WVD3 245 aa16.34■□□□□ 0.21
VARS2-206ENST00000473916 ZNRF4Q8WWF5 429 aa16.34■□□□□ 0.21
VARS2-206ENST00000473916 TRMT61AQ96FX7 289 aaKnown RBP16.34■□□□□ 0.21
VARS2-206ENST00000473916 TAAR9Q96RI9 348 aa16.34■□□□□ 0.21
VARS2-206ENST00000473916 SECISBP2Q96T21 854 aaKnown RBP16.34■□□□□ 0.21
VARS2-206ENST00000473916 PTDSS2Q9BVG9 487 aa16.34■□□□□ 0.21
VARS2-206ENST00000473916 NRIP3Q9NQ35 241 aa16.34■□□□□ 0.21
VARS2-206ENST00000473916 PADI1Q9ULC6 663 aa16.34■□□□□ 0.21
VARS2-206ENST00000473916 BAIAP2Q9UQB8 552 aa16.34■□□□□ 0.21
VARS2-206ENST00000473916 VDAC3Q9Y277 283 aa16.34■□□□□ 0.21
VARS2-206ENST00000473916 TMED7Q9Y3B3 224 aa16.34■□□□□ 0.21
VARS2-206ENST00000473916 J3QRE1 110 aa16.33■□□□□ 0.21
VARS2-206ENST00000473916 M0R3G1 203 aa16.33■□□□□ 0.21
VARS2-206ENST00000473916 GPX5O75715 221 aa16.33■□□□□ 0.21
VARS2-206ENST00000473916 DLGAP3O95886 979 aa16.33■□□□□ 0.21
VARS2-206ENST00000473916 LIMK1P53667 647 aa16.33■□□□□ 0.21
VARS2-206ENST00000473916 SH3BGRP55822 239 aaPredicted RBP16.33■□□□□ 0.21
VARS2-206ENST00000473916 WNT4P56705 351 aa16.33■□□□□ 0.21
VARS2-206ENST00000473916 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.33■□□□□ 0.21
VARS2-206ENST00000473916 TMEM44Q2T9K0 475 aa16.33■□□□□ 0.21
VARS2-206ENST00000473916 DPY19L2P2Q6ZN68 376 aa16.33■□□□□ 0.21
VARS2-206ENST00000473916 LRRC75AQ8NAA5 344 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms