RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 OR5B2Q96R09 309 aa17.28■□□□□ 0.36
PSPC1-203ENST00000471658 C9orf16Q9BUW7 83 aa17.28■□□□□ 0.36
PSPC1-203ENST00000471658 SLC19A3Q9BZV2 496 aa17.28■□□□□ 0.36
PSPC1-203ENST00000471658 GABARAPL1Q9H0R8 117 aa17.28■□□□□ 0.36
PSPC1-203ENST00000471658 SPIN1Q9Y657 262 aaPredicted RBP17.28■□□□□ 0.36
PSPC1-203ENST00000471658 TRAV36DV7A0A075B6V5 113 aa17.27■□□□□ 0.36
PSPC1-203ENST00000471658 A0A0J9YW62 118 aa17.27■□□□□ 0.36
PSPC1-203ENST00000471658 SEC14L5O43304 696 aa17.27■□□□□ 0.36
PSPC1-203ENST00000471658 BGLAPP02818 100 aa17.27■□□□□ 0.36
PSPC1-203ENST00000471658 ZNF26P17031 533 aaPredicted RBP17.27■□□□□ 0.36
PSPC1-203ENST00000471658 POU3F2P20265 443 aaPredicted RBP17.27■□□□□ 0.36
PSPC1-203ENST00000471658 PPP2R2BQ00005 443 aa17.27■□□□□ 0.36
PSPC1-203ENST00000471658 SLC46A3Q7Z3Q1 461 aa17.27■□□□□ 0.36
PSPC1-203ENST00000471658 GGNQ86UU5 652 aa17.27■□□□□ 0.36
PSPC1-203ENST00000471658 C10orf53Q8N6V4 93 aa17.27■□□□□ 0.36
PSPC1-203ENST00000471658 GNPDA2Q8TDQ7 276 aa17.27■□□□□ 0.36
PSPC1-203ENST00000471658 ABTB1Q969K4 478 aaPredicted RBP17.27■□□□□ 0.36
PSPC1-203ENST00000471658 SDCCAG3Q96C92 435 aa17.27■□□□□ 0.36
PSPC1-203ENST00000471658 SLC25A36Q96CQ1 311 aa17.27■□□□□ 0.36
PSPC1-203ENST00000471658 SGTBQ96EQ0 304 aa17.27■□□□□ 0.36
PSPC1-203ENST00000471658 PSD2Q9BQI7 771 aa17.27■□□□□ 0.36
PSPC1-203ENST00000471658 OSBPL10Q9BXB5 764 aa17.27■□□□□ 0.36
PSPC1-203ENST00000471658 POTEKPQ9BYX7 375 aa17.27■□□□□ 0.36
PSPC1-203ENST00000471658 TMEFF2Q9UIK5 374 aaPredicted RBP17.27■□□□□ 0.36
PSPC1-203ENST00000471658 KLF4O43474 513 aa17.26■□□□□ 0.35
PSPC1-203ENST00000471658 AHSA1O95433 338 aa17.26■□□□□ 0.35
PSPC1-203ENST00000471658 CRYABP02511 175 aaKnown RBP17.26■□□□□ 0.35
PSPC1-203ENST00000471658 SFTPCP11686 197 aa17.26■□□□□ 0.35
PSPC1-203ENST00000471658 LHX2P50458 406 aa17.26■□□□□ 0.35
PSPC1-203ENST00000471658 MYBPHQ13203 477 aa17.26■□□□□ 0.35
PSPC1-203ENST00000471658 DAG1Q14118 895 aa17.26■□□□□ 0.35
PSPC1-203ENST00000471658 SNCBQ16143 134 aa17.26■□□□□ 0.35
PSPC1-203ENST00000471658 C3AR1Q16581 482 aa17.26■□□□□ 0.35
PSPC1-203ENST00000471658 ZNF324BQ6AW86 544 aaPredicted RBP17.26■□□□□ 0.35
PSPC1-203ENST00000471658 PPP4R4Q6NUP7 873 aa17.26■□□□□ 0.35
PSPC1-203ENST00000471658 FAM180AQ6UWF9 173 aa17.26■□□□□ 0.35
PSPC1-203ENST00000471658 GALNT5Q7Z7M9 940 aa17.26■□□□□ 0.35
PSPC1-203ENST00000471658 LINC00471Q8N535 108 aa17.26■□□□□ 0.35
PSPC1-203ENST00000471658 SLC25A43Q8WUT9 341 aaPredicted RBP17.26■□□□□ 0.35
PSPC1-203ENST00000471658 SNRNP40Q96DI7 357 aaKnown RBP17.26■□□□□ 0.35
PSPC1-203ENST00000471658 KLHL4Q9C0H6 718 aa17.26■□□□□ 0.35
PSPC1-203ENST00000471658 MGAT4BQ9UQ53 548 aa17.26■□□□□ 0.35
PSPC1-203ENST00000471658 AP4B1Q9Y6B7 739 aa17.26■□□□□ 0.35
PSPC1-203ENST00000471658 ZNF407Q9C0G0 2248 aa17.26■□□□□ 0.35
PSPC1-203ENST00000471658 MPDZO75970 2070 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 TLN1Q9Y490 2541 aaKnown RBP17.25■□□□□ 0.35
PSPC1-203ENST00000471658 ARRDC5A6NEK1 342 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 TNFSF11O14788 317 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 IGFBP1P08833 259 aaPredicted RBP17.25■□□□□ 0.35
PSPC1-203ENST00000471658 ANXA8P13928 327 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 IDUAP35475 653 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 GSSP48637 474 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 MAP2K6P52564 334 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 IL1RL1Q01638 556 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 SRYQ05066 204 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 ZNF74Q16587 644 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 CTU2Q2VPK5 515 aaKnown RBP17.25■□□□□ 0.35
PSPC1-203ENST00000471658 VASNQ6EMK4 673 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 TMPRSS11FQ6ZWK6 438 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 CDK20Q8IZL9 346 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 KLHL15Q96M94 604 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 TIMP4Q99727 224 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 DGCR6LQ9BY27 220 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 KIF17Q9P2E2 1029 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 SEC14L4Q9UDX3 406 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 ATRXP46100 2492 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 A0A1B0GTH9 108 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 EFCAB9A8MZ26 197 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 FTCDNL1E5RQL4 147 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 EIF1AYO14602 144 aaKnown RBP17.25■□□□□ 0.35
PSPC1-203ENST00000471658 HCN1O60741 890 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 OR7A10O76100 309 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 ALPLP05186 524 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 KLK2P20151 261 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 IFNGR2P38484 337 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 CLDN18P56856 261 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 OR7A5Q15622 319 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 GXYLT1Q4G148 440 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 KDM4DQ6B0I6 523 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 OR13C2Q8NGS9 318 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 RBM4BQ9BQ04 359 aaKnown RBP17.25■□□□□ 0.35
PSPC1-203ENST00000471658 RBM4Q9BWF3 364 aaKnown RBP17.25■□□□□ 0.35
PSPC1-203ENST00000471658 UCK2Q9BZX2 261 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 PLSCR2Q9NRY7 297 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 ASF1BQ9NVP2 202 aa17.25■□□□□ 0.35
PSPC1-203ENST00000471658 A0A1B0GVC2 190 aa17.24■□□□□ 0.35
PSPC1-203ENST00000471658 LIPT2A6NK58 231 aa17.24■□□□□ 0.35
PSPC1-203ENST00000471658 LINC01387J3KSC0 135 aa17.24■□□□□ 0.35
PSPC1-203ENST00000471658 ACTL6AO96019 429 aa17.24■□□□□ 0.35
PSPC1-203ENST00000471658 ADAP00813 363 aa17.24■□□□□ 0.35
PSPC1-203ENST00000471658 SAGP10523 405 aaPredicted RBP17.24■□□□□ 0.35
PSPC1-203ENST00000471658 GCKP35557 465 aa17.24■□□□□ 0.35
PSPC1-203ENST00000471658 CLK1P49759 484 aaKnown RBP17.24■□□□□ 0.35
PSPC1-203ENST00000471658 ALDH3A2P51648 485 aa17.24■□□□□ 0.35
PSPC1-203ENST00000471658 OR2B6P58173 313 aa17.24■□□□□ 0.35
PSPC1-203ENST00000471658 TSPAN31Q12999 210 aa17.24■□□□□ 0.35
PSPC1-203ENST00000471658 NHSL2Q5HYW2 709 aa17.24■□□□□ 0.35
PSPC1-203ENST00000471658 FAM69AQ5T7M9 428 aa17.24■□□□□ 0.35
PSPC1-203ENST00000471658 KLHL17Q6TDP4 642 aa17.24■□□□□ 0.35
PSPC1-203ENST00000471658 TMPPEQ6ZT21 453 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms