RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 PRAMEF20Q5VT98 475 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 AADACL4Q5VUY2 407 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 RNLSQ5VYX0 342 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 NXNL2Q5VZ03 156 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 OR5M10Q6IEU7 315 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 DPY19L2P2Q6ZN68 376 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 NANOGNBQ7Z5D8 188 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 ADGRG3Q86Y34 549 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 MARCH9Q86YJ5 346 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 GID4Q8IVV7 300 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 STX19Q8N4C7 294 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 LRRC17Q8N6Y2 441 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 OR13F1Q8NGS4 319 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 OR6S1Q8NH40 331 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 FAR1Q8WVX9 515 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 PSMF1Q92530 271 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 RFKQ969G6 155 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 TMIGD2Q96BF3 282 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 MRGPRX4Q96LA9 322 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 MOGAT1Q96PD6 335 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 PTDSS2Q9BVG9 487 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 CDCA4Q9BXL8 241 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 ENKD1Q9H0I2 346 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 PTGES2Q9H7Z7 377 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 AMBNQ9NP70 447 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 ACOT13Q9NPJ3 140 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 NRIP3Q9NQ35 241 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 NANSQ9NR45 359 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 MED11Q9P086 117 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 IL17BQ9UHF5 180 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.51□□□□□ -1.05
VPS52-216ENST00000471309 GPR52Q9Y2T5 361 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 SLC6A5Q9Y345 797 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 CEPT1Q9Y6K0 416 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 CFAP54Q96N23 3096 aa8.51□□□□□ -1.05
VPS52-216ENST00000471309 VPS13AQ96RL7 3174 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 A0A087WZY1 265 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 RIIAD1A6NNX1 92 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 ZNF99A8MXY4 864 aaPredicted RBP8.5□□□□□ -1.05
VPS52-216ENST00000471309 MCIDASD6RGH6 385 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 ZNF701M0R085 212 aaPredicted RBP8.5□□□□□ -1.05
VPS52-216ENST00000471309 SNPHO15079 494 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 ARPC3O15145 178 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 ZNF208O43345 1280 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 OR2T1O43869 369 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 SNX4O95219 450 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 WISP1O95388 367 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 AHSA1O95433 338 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 IFNGP01579 166 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 STSP08842 583 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 CCL3P10147 92 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 PEPDP12955 493 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 APEHP13798 732 aaKnown RBP8.5□□□□□ -1.05
VPS52-216ENST00000471309 ZNF3P17036 446 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 CCNA2P20248 432 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 MAP2K4P45985 399 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 RPS5P46782 204 aaKnown RBP8.5□□□□□ -1.05
VPS52-216ENST00000471309 MLLT10P55197 1068 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 CDH11P55287 796 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 LTBQ06643 244 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 ST3GAL4Q11206 333 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 IRF3Q14653 427 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 KLHL22Q53GT1 634 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 DCAF10Q5QP82 559 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 SYT6Q5T7P8 510 aaPredicted RBP8.5□□□□□ -1.05
VPS52-216ENST00000471309 C1orf140Q5VVS0 124 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 UBE2UQ5VVX9 321 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 SLC22A10Q63ZE4 541 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 NIPAL3Q6P499 406 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 POMZP3Q6PJE2 187 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 ARSKQ6UWY0 536 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 CXXC5Q7LFL8 322 aaKnown RBP8.5□□□□□ -1.05
VPS52-216ENST00000471309 MAMDC2Q7Z304 686 aaPredicted RBP8.5□□□□□ -1.05
VPS52-216ENST00000471309 BCDIN3DQ7Z5W3 292 aaKnown RBP8.5□□□□□ -1.05
VPS52-216ENST00000471309 PLCZ1Q86YW0 608 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 SIRT6Q8N6T7 355 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 C10orf53Q8N6V4 93 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 WDSUB1Q8N9V3 476 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 LRRC75AQ8NAA5 344 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 OR4K17Q8NGC6 315 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 RORBQ92753 470 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 TAAR8Q969N4 342 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 ZBTB8AQ96BR9 441 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 DGCR14Q96DF8 476 aaKnown RBP8.5□□□□□ -1.05
VPS52-216ENST00000471309 C1GALT1C1Q96EU7 318 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 TMEM80Q96HE8 168 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 TMEM41AQ96HV5 264 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 THOC3Q96J01 351 aaKnown RBP8.5□□□□□ -1.05
VPS52-216ENST00000471309 FER1L6-AS2Q96M78 137 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 LHPPQ9H008 270 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 HINT3Q9NQE9 182 aaKnown RBP8.5□□□□□ -1.05
VPS52-216ENST00000471309 MRPS18AQ9NVS2 196 aaKnown RBP8.5□□□□□ -1.05
VPS52-216ENST00000471309 DLL3Q9NYJ7 618 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 CHRNA9Q9UGM1 479 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 TEKT2Q9UIF3 430 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 KLHL21Q9UJP4 597 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 VDAC3Q9Y277 283 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 SPTBN4Q9H254 2564 aa8.5□□□□□ -1.05
VPS52-216ENST00000471309 ZFHX2Q9C0A1 2572 aaPredicted RBP8.49□□□□□ -1.05
VPS52-216ENST00000471309 ZC3H12DA2A288 527 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms