RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 ADAM18Q9Y3Q7 739 aa7.54□□□□□ -1.2
GTF3A-206ENST00000470606 FAM183AA6NL82 134 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 TP53I11O14683 189 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 ZIC3O60481 467 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 BGLAPP02818 100 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 TSPAN19P0C672 248 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 RFPL3SP0C7P2 107 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 PRKAR1AP10644 381 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 GP1BBP13224 206 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 EEF1B2P24534 225 aaKnown RBP7.53□□□□□ -1.2
GTF3A-206ENST00000470606 SHC1P29353 583 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 SLC9A3P48764 834 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 DNASE1L1P49184 302 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 POLR2HP52434 150 aaKnown RBP7.53□□□□□ -1.2
GTF3A-206ENST00000470606 SMSP52788 366 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 PMS2P3Q13401 168 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 SLC25A53Q5H9E4 307 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 SPINK14Q6IE38 97 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 ZNF773Q6PK81 442 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 SMARCD3Q6STE5 483 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 KCTD8Q6ZWB6 473 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 AHSA2Q719I0 299 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 CYP4Z2PQ8N1L4 340 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 LRRC75AQ8NAA5 344 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 OR8J1Q8NGP2 316 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 C1GALT1C1Q96EU7 318 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 LRR1Q96L50 414 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 ZNF582Q96NG8 517 aaPredicted RBP7.53□□□□□ -1.2
GTF3A-206ENST00000470606 SECISBP2Q96T21 854 aaKnown RBP7.53□□□□□ -1.2
GTF3A-206ENST00000470606 HES7Q9BYE0 225 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 HINT3Q9NQE9 182 aaKnown RBP7.53□□□□□ -1.2
GTF3A-206ENST00000470606 PLCXD1Q9NUJ7 323 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 WDR70Q9NW82 654 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 TAS2R16Q9NYV7 291 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 PLA2G3Q9NZ20 509 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 CHRNA9Q9UGM1 479 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 TMEM5Q9Y2B1 443 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 TNRC6AQ8NDV7 1962 aaKnown RBP7.53□□□□□ -1.2
GTF3A-206ENST00000470606 CACNA1AO00555 2505 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 SVILO95425 2214 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 KIAA1549Q9HCM3 1950 aa7.53□□□□□ -1.2
GTF3A-206ENST00000470606 A0A087WXM4 84 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 LRRC3CA6NJW4 275 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 FTCDNL1E5RQL4 147 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 TRIM3O75382 744 aaPredicted RBP7.52□□□□□ -1.2
GTF3A-206ENST00000470606 PPP1R3DO95685 299 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 IGF2P01344 180 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 MT-ND2P03891 347 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 OPN1LWP04000 364 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 CXCR1P25024 350 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 ITGA3P26006 1051 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 NOS3P29474 1203 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 UQCRC1P31930 480 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 AQP2P41181 271 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 MAP2K4P45985 399 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 RPL5P46777 297 aaKnown RBP7.52□□□□□ -1.2
GTF3A-206ENST00000470606 SUMO3P55854 103 aaPredicted RBP7.52□□□□□ -1.2
GTF3A-206ENST00000470606 GABARAPL2P60520 117 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 GPR85P60893 370 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 TUBA4AP68366 448 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 FOXK2Q01167 660 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 EMX1Q04741 257 aaPredicted RBP7.52□□□□□ -1.2
GTF3A-206ENST00000470606 FOXO1Q12778 655 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 SNAPC1Q16533 368 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 OCLNQ16625 522 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 SLC25A30Q5SVS4 291 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 AADACL4Q5VUY2 407 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 GTF2IRD2BQ6EKJ0 949 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 CASP12Q6UXS9 341 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 B3GLCTQ6Y288 498 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 GTF2IRD2Q86UP8 949 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 CDK20Q8IZL9 346 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 DEPDC4Q8N2C3 294 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 ZNF540Q8NDQ6 660 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 PSD4Q8NDX1 1056 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 OR2T33Q8NG76 320 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 TMEM163Q8TC26 289 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 TRUB1Q8WWH5 349 aaKnown RBP7.52□□□□□ -1.2
GTF3A-206ENST00000470606 ST8SIA1Q92185 356 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 PTP4A1Q93096 173 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 CCNL2Q96S94 520 aaPredicted RBP7.52□□□□□ -1.2
GTF3A-206ENST00000470606 IFT27Q9BW83 186 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 TAPBPLQ9BX59 468 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 MED20Q9H944 212 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 TAS2R5Q9NYW4 299 aa7.52□□□□□ -1.2
GTF3A-206ENST00000470606 ANKRD33BA6NCL7 494 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 ARGFXA6NJG6 315 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 A6NL46 340 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 CLCA1A8K7I4 914 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 SNPHO15079 494 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 HCN1O60741 890 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 FAM20BO75063 409 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 WDPCPO95876 746 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 F13BP05160 661 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 STSP08842 583 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 CLUP10909 449 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 KLK2P20151 261 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 ACVR2AP27037 513 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 TEKQ02763 1124 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 RPL18Q07020 188 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms