RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 DDIT4LQ96D03 193 aa16.42■□□□□ 0.22
NCKIPSD-209ENST00000470006 FCRL1Q96LA6 429 aa16.42■□□□□ 0.22
NCKIPSD-209ENST00000470006 TSPYL1Q9H0U9 437 aa16.42■□□□□ 0.22
NCKIPSD-209ENST00000470006 ZNF696Q9H7X3 374 aa16.42■□□□□ 0.22
NCKIPSD-209ENST00000470006 KCNE5Q9UJ90 142 aa16.42■□□□□ 0.22
NCKIPSD-209ENST00000470006 TMED5Q9Y3A6 229 aa16.42■□□□□ 0.22
NCKIPSD-209ENST00000470006 A0A096LPE4 126 aa16.41■□□□□ 0.22
NCKIPSD-209ENST00000470006 A0A1W2PPZ6 126 aa16.41■□□□□ 0.22
NCKIPSD-209ENST00000470006 ZNF587BE7ETH6 402 aa16.41■□□□□ 0.22
NCKIPSD-209ENST00000470006 UGT2B17O75795 530 aa16.41■□□□□ 0.22
NCKIPSD-209ENST00000470006 NEFHP12036 1026 aa16.41■□□□□ 0.22
NCKIPSD-209ENST00000470006 BCKDHAP12694 445 aa16.41■□□□□ 0.22
NCKIPSD-209ENST00000470006 MATN1P21941 496 aa16.41■□□□□ 0.22
NCKIPSD-209ENST00000470006 PAX7P23759 505 aa16.41■□□□□ 0.22
NCKIPSD-209ENST00000470006 GPR6P46095 362 aaPredicted RBP16.41■□□□□ 0.22
NCKIPSD-209ENST00000470006 ZYG11AQ6WRX3 759 aa16.41■□□□□ 0.22
NCKIPSD-209ENST00000470006 C16orf62Q7Z3J2 963 aa16.41■□□□□ 0.22
NCKIPSD-209ENST00000470006 GPAT4Q86UL3 456 aa16.41■□□□□ 0.22
NCKIPSD-209ENST00000470006 CDK20Q8IZL9 346 aa16.41■□□□□ 0.22
NCKIPSD-209ENST00000470006 NUP37Q8NFH4 326 aa16.41■□□□□ 0.22
NCKIPSD-209ENST00000470006 OR51F2Q8NH61 342 aa16.41■□□□□ 0.22
NCKIPSD-209ENST00000470006 CLDND2Q8NHS1 167 aa16.41■□□□□ 0.22
NCKIPSD-209ENST00000470006 SFXN5Q8TD22 340 aa16.41■□□□□ 0.22
NCKIPSD-209ENST00000470006 IFT81Q8WYA0 676 aa16.41■□□□□ 0.22
NCKIPSD-209ENST00000470006 TREM2Q9NZC2 230 aa16.41■□□□□ 0.22
NCKIPSD-209ENST00000470006 ATP6V1HQ9UI12 483 aa16.41■□□□□ 0.22
NCKIPSD-209ENST00000470006 TMED7-TICAM2A0A0A6YYA0 188 aa16.4■□□□□ 0.22
NCKIPSD-209ENST00000470006 OR6C65A6NJZ3 312 aa16.4■□□□□ 0.22
NCKIPSD-209ENST00000470006 DUXAA6NLW8 204 aa16.4■□□□□ 0.22
NCKIPSD-209ENST00000470006 CHEK2O96017 543 aa16.4■□□□□ 0.22
NCKIPSD-209ENST00000470006 AK1P00568 194 aa16.4■□□□□ 0.22
NCKIPSD-209ENST00000470006 SAGP10523 405 aaPredicted RBP16.4■□□□□ 0.22
NCKIPSD-209ENST00000470006 IDH2P48735 452 aaKnown RBP16.4■□□□□ 0.22
NCKIPSD-209ENST00000470006 KHKP50053 298 aa16.4■□□□□ 0.22
NCKIPSD-209ENST00000470006 HGFACQ04756 655 aa16.4■□□□□ 0.22
NCKIPSD-209ENST00000470006 OTUD3Q5T2D3 398 aaPredicted RBP16.4■□□□□ 0.22
NCKIPSD-209ENST00000470006 SHISA2Q6UWI4 295 aa16.4■□□□□ 0.22
NCKIPSD-209ENST00000470006 DDIASQ8IXT1 998 aa16.4■□□□□ 0.22
NCKIPSD-209ENST00000470006 TEX29Q8N6K0 151 aa16.4■□□□□ 0.22
NCKIPSD-209ENST00000470006 OR9K2Q8NGE7 335 aa16.4■□□□□ 0.22
NCKIPSD-209ENST00000470006 PMM1Q92871 262 aa16.4■□□□□ 0.22
NCKIPSD-209ENST00000470006 TMEM45BQ96B21 275 aa16.4■□□□□ 0.22
NCKIPSD-209ENST00000470006 ZNF385AQ96PM9 386 aaKnown RBP16.4■□□□□ 0.22
NCKIPSD-209ENST00000470006 SUCNR1Q9BXA5 334 aa16.4■□□□□ 0.22
NCKIPSD-209ENST00000470006 ZNF442Q9H7R0 627 aa16.4■□□□□ 0.22
NCKIPSD-209ENST00000470006 SEC61A2Q9H9S3 476 aa16.4■□□□□ 0.22
NCKIPSD-209ENST00000470006 ATAD3AQ9NVI7 634 aa16.4■□□□□ 0.22
NCKIPSD-209ENST00000470006 DCDC2Q9UHG0 476 aa16.4■□□□□ 0.22
NCKIPSD-209ENST00000470006 PCDHGB4Q9UN71 923 aa16.4■□□□□ 0.22
NCKIPSD-209ENST00000470006 SLC35A3Q9Y2D2 325 aa16.4■□□□□ 0.22
NCKIPSD-209ENST00000470006 TMED7Q9Y3B3 224 aa16.4■□□□□ 0.22
NCKIPSD-209ENST00000470006 LOC105371242A0A075B767 164 aa16.39■□□□□ 0.21
NCKIPSD-209ENST00000470006 TMEM114B3SHH9 223 aa16.39■□□□□ 0.21
NCKIPSD-209ENST00000470006 G3V2L1 256 aa16.39■□□□□ 0.21
NCKIPSD-209ENST00000470006 AZIN1O14977 448 aa16.39■□□□□ 0.21
NCKIPSD-209ENST00000470006 IMPDH2P12268 514 aa16.39■□□□□ 0.21
NCKIPSD-209ENST00000470006 CASQ1P31415 396 aa16.39■□□□□ 0.21
NCKIPSD-209ENST00000470006 PGM1P36871 562 aa16.39■□□□□ 0.21
NCKIPSD-209ENST00000470006 MAPK14Q16539 360 aa16.39■□□□□ 0.21
NCKIPSD-209ENST00000470006 FAM153CQ494X1 144 aa16.39■□□□□ 0.21
NCKIPSD-209ENST00000470006 MIDNQ504T8 468 aa16.39■□□□□ 0.21
NCKIPSD-209ENST00000470006 PAQR6Q6TCH4 344 aa16.39■□□□□ 0.21
NCKIPSD-209ENST00000470006 LSRQ86X29 649 aaPredicted RBP16.39■□□□□ 0.21
NCKIPSD-209ENST00000470006 ARFGAP2Q8N6H7 521 aa16.39■□□□□ 0.21
NCKIPSD-209ENST00000470006 CCDC63Q8NA47 563 aa16.39■□□□□ 0.21
NCKIPSD-209ENST00000470006 FMO2Q99518 471 aa16.39■□□□□ 0.21
NCKIPSD-209ENST00000470006 ZNF747Q9BV97 191 aa16.39■□□□□ 0.21
NCKIPSD-209ENST00000470006 EXD2Q9NVH0 621 aa16.39■□□□□ 0.21
NCKIPSD-209ENST00000470006 TMEM129A0AVI4 362 aa16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 TMEM72A0PK05 275 aa16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 LSM1O15116 133 aaKnown RBP16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 BCAS1O75363 584 aaPredicted RBP16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 URI1O94763 535 aaPredicted RBP16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 BCL10O95999 233 aa16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 PNPP00491 289 aa16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 TFP02787 698 aa16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 CELA3BP08861 270 aa16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 MAPK1P28482 360 aa16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 HTR3AP46098 478 aa16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 ARFIP2P53365 341 aa16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 ARHGAP11BQ3KRB8 267 aa16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 C3orf36Q3SXR2 165 aa16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 ZNF311Q5JNZ3 666 aa16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 HMGN2P46Q86SG4 172 aa16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 CARM1Q86X55 608 aa16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 TMEM99Q8N816 258 aa16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 ZIC4Q8N9L1 334 aa16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 PSMA8Q8TAA3 256 aa16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 BCL2L2Q92843 193 aaPredicted RBP16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 MRPL24Q96A35 216 aaKnown RBP16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 ALKBH3Q96Q83 286 aaPredicted RBP16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 PRPF18Q99633 342 aaKnown RBP16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 SERHL2Q9H4I8 314 aa16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 MOV10Q9HCE1 1003 aaKnown RBP16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 CRNNQ9UBG3 495 aaPredicted RBP16.38■□□□□ 0.21
NCKIPSD-209ENST00000470006 TRRAPQ9Y4A5 3859 aa16.37■□□□□ 0.21
NCKIPSD-209ENST00000470006 ARPC4-TTLL3A0A0A6YYG9 625 aa16.37■□□□□ 0.21
NCKIPSD-209ENST00000470006 A0A0G2JK05 382 aa16.37■□□□□ 0.21
NCKIPSD-209ENST00000470006 SCN2BO60939 215 aa16.37■□□□□ 0.21
NCKIPSD-209ENST00000470006 AKR7A3O95154 331 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms