RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 UPB1Q9UBR1 384 aa19.2■□□□□ 0.66
TTC28-204ENST00000468807 ZNF443Q9Y2A4 671 aaPredicted RBP19.2■□□□□ 0.66
TTC28-204ENST00000468807 USH1CQ9Y6N9 552 aa19.2■□□□□ 0.66
TTC28-204ENST00000468807 FN1P02751 2386 aaKnown RBP19.2■□□□□ 0.66
TTC28-204ENST00000468807 FAAHO00519 579 aa19.19■□□□□ 0.66
TTC28-204ENST00000468807 TFPTP0C1Z6 253 aa19.19■□□□□ 0.66
TTC28-204ENST00000468807 ZCCHC18P0CG32 403 aa19.19■□□□□ 0.66
TTC28-204ENST00000468807 NCF2P19878 526 aaPredicted RBP19.19■□□□□ 0.66
TTC28-204ENST00000468807 IDUAP35475 653 aa19.19■□□□□ 0.66
TTC28-204ENST00000468807 ZNF83P51522 516 aa19.19■□□□□ 0.66
TTC28-204ENST00000468807 CEACAM7Q14002 265 aa19.19■□□□□ 0.66
TTC28-204ENST00000468807 LARS2Q15031 903 aaKnown RBP19.19■□□□□ 0.66
TTC28-204ENST00000468807 OR7A5Q15622 319 aa19.19■□□□□ 0.66
TTC28-204ENST00000468807 CLEC12BQ2HXU8 276 aa19.19■□□□□ 0.66
TTC28-204ENST00000468807 OTUD3Q5T2D3 398 aaPredicted RBP19.19■□□□□ 0.66
TTC28-204ENST00000468807 MSANTD1Q6ZTZ1 278 aa19.19■□□□□ 0.66
TTC28-204ENST00000468807 SSX8Q7RTT4 187 aa19.19■□□□□ 0.66
TTC28-204ENST00000468807 TAS2R16Q9NYV7 291 aa19.19■□□□□ 0.66
TTC28-204ENST00000468807 ZNF232Q9UNY5 417 aa19.19■□□□□ 0.66
TTC28-204ENST00000468807 SLC9A8Q9Y2E8 581 aa19.19■□□□□ 0.66
TTC28-204ENST00000468807 DSPPQ9NZW4 1301 aa19.19■□□□□ 0.66
TTC28-204ENST00000468807 KLF11O14901 512 aa19.18■□□□□ 0.66
TTC28-204ENST00000468807 AKR7A3O95154 331 aa19.18■□□□□ 0.66
TTC28-204ENST00000468807 PGM3O95394 542 aa19.18■□□□□ 0.66
TTC28-204ENST00000468807 GPIP06744 558 aa19.18■□□□□ 0.66
TTC28-204ENST00000468807 MAP2K6P52564 334 aa19.18■□□□□ 0.66
TTC28-204ENST00000468807 FOXG1P55316 489 aaPredicted RBP19.18■□□□□ 0.66
TTC28-204ENST00000468807 STX1BP61266 288 aa19.18■□□□□ 0.66
TTC28-204ENST00000468807 H3F3AP84243 136 aa19.18■□□□□ 0.66
TTC28-204ENST00000468807 BNIP2Q12982 314 aa19.18■□□□□ 0.66
TTC28-204ENST00000468807 TNK1Q13470 666 aa19.18■□□□□ 0.66
TTC28-204ENST00000468807 PGGHGQ32M88 737 aa19.18■□□□□ 0.66
TTC28-204ENST00000468807 SLC2A7Q6PXP3 512 aa19.18■□□□□ 0.66
TTC28-204ENST00000468807 KLHL17Q6TDP4 642 aa19.18■□□□□ 0.66
TTC28-204ENST00000468807 TMEM108Q6UXF1 575 aa19.18■□□□□ 0.66
TTC28-204ENST00000468807 GPAT4Q86UL3 456 aa19.18■□□□□ 0.66
TTC28-204ENST00000468807 C1QTNF6Q9BXI9 259 aa19.18■□□□□ 0.66
TTC28-204ENST00000468807 ADAM19Q9H013 955 aa19.18■□□□□ 0.66
TTC28-204ENST00000468807 FAIMQ9NVQ4 179 aa19.18■□□□□ 0.66
TTC28-204ENST00000468807 PARPBPQ9NWS1 579 aa19.18■□□□□ 0.66
TTC28-204ENST00000468807 MALT1Q9UDY8 824 aa19.18■□□□□ 0.66
TTC28-204ENST00000468807 POU2F3Q9UKI9 436 aa19.18■□□□□ 0.66
TTC28-204ENST00000468807 FLVCR1Q9Y5Y0 555 aa19.18■□□□□ 0.66
TTC28-204ENST00000468807 HIVEP2P31629 2446 aa19.17■□□□□ 0.66
TTC28-204ENST00000468807 FAM234BA2RU67 622 aa19.17■□□□□ 0.66
TTC28-204ENST00000468807 SHISA9B4DS77 424 aa19.17■□□□□ 0.66
TTC28-204ENST00000468807 OVOL3O00110 214 aa19.17■□□□□ 0.66
TTC28-204ENST00000468807 PTNP21246 168 aa19.17■□□□□ 0.66
TTC28-204ENST00000468807 SLC17A1Q14916 467 aa19.17■□□□□ 0.66
TTC28-204ENST00000468807 WBP2NLQ6ICG8 309 aa19.17■□□□□ 0.66
TTC28-204ENST00000468807 PAQR6Q6TCH4 344 aa19.17■□□□□ 0.66
TTC28-204ENST00000468807 CLIP4Q8N3C7 705 aa19.17■□□□□ 0.66
TTC28-204ENST00000468807 TMEM99Q8N816 258 aa19.17■□□□□ 0.66
TTC28-204ENST00000468807 TAPBPLQ9BX59 468 aa19.17■□□□□ 0.66
TTC28-204ENST00000468807 ARMC7Q9H6L4 198 aa19.17■□□□□ 0.66
TTC28-204ENST00000468807 ADPRHL2Q9NX46 363 aa19.17■□□□□ 0.66
TTC28-204ENST00000468807 THUMPD1Q9NXG2 353 aaKnown RBP19.17■□□□□ 0.66
TTC28-204ENST00000468807 A0A0G2JPF8 293 aa19.16■□□□□ 0.66
TTC28-204ENST00000468807 HNRNPCL2B2RXH8 293 aa19.16■□□□□ 0.66
TTC28-204ENST00000468807 HNRNPCL3B7ZW38 293 aa19.16■□□□□ 0.66
TTC28-204ENST00000468807 M0R1B8 84 aa19.16■□□□□ 0.66
TTC28-204ENST00000468807 POLR3GO15318 223 aaPredicted RBP19.16■□□□□ 0.66
TTC28-204ENST00000468807 HNRNPCL1O60812 293 aaKnown RBP19.16■□□□□ 0.66
TTC28-204ENST00000468807 THBS1P07996 1170 aa19.16■□□□□ 0.66
TTC28-204ENST00000468807 ITGA5P08648 1049 aa19.16■□□□□ 0.66
TTC28-204ENST00000468807 NUDT7P0C024 238 aa19.16■□□□□ 0.66
TTC28-204ENST00000468807 HNRNPCL4P0DMR1 293 aa19.16■□□□□ 0.66
TTC28-204ENST00000468807 PRG2P13727 222 aa19.16■□□□□ 0.66
TTC28-204ENST00000468807 ACAA2P42765 397 aaKnown RBP19.16■□□□□ 0.66
TTC28-204ENST00000468807 GABRA6Q16445 453 aa19.16■□□□□ 0.66
TTC28-204ENST00000468807 RNF220Q5VTB9 566 aa19.16■□□□□ 0.66
TTC28-204ENST00000468807 OR7E24Q6IFN5 339 aa19.16■□□□□ 0.66
TTC28-204ENST00000468807 SLC22A25Q6T423 547 aa19.16■□□□□ 0.66
TTC28-204ENST00000468807 EPGNQ6UW88 154 aa19.16■□□□□ 0.66
TTC28-204ENST00000468807 LRRC8CQ8TDW0 803 aa19.16■□□□□ 0.66
TTC28-204ENST00000468807 GTF2H4Q92759 462 aa19.16■□□□□ 0.66
TTC28-204ENST00000468807 MAL2Q969L2 176 aa19.16■□□□□ 0.66
TTC28-204ENST00000468807 HS6ST2Q96MM7 605 aa19.16■□□□□ 0.66
TTC28-204ENST00000468807 SLC7A10Q9NS82 523 aa19.16■□□□□ 0.66
TTC28-204ENST00000468807 PCDHB14Q9Y5E9 798 aa19.16■□□□□ 0.66
TTC28-204ENST00000468807 SLC25A15Q9Y619 301 aa19.16■□□□□ 0.66
TTC28-204ENST00000468807 JMJD1CQ15652 2540 aa19.15■□□□□ 0.66
TTC28-204ENST00000468807 LIPT2A6NK58 231 aa19.15■□□□□ 0.66
TTC28-204ENST00000468807 C5orf58C9J3I9 102 aa19.15■□□□□ 0.66
TTC28-204ENST00000468807 RNF223E7ERA6 249 aa19.15■□□□□ 0.66
TTC28-204ENST00000468807 CLIC1O00299 241 aa19.15■□□□□ 0.66
TTC28-204ENST00000468807 CDH2P19022 906 aaPredicted RBP19.15■□□□□ 0.66
TTC28-204ENST00000468807 PPP2R2BQ00005 443 aa19.15■□□□□ 0.66
TTC28-204ENST00000468807 SPOCK1Q08629 439 aa19.15■□□□□ 0.66
TTC28-204ENST00000468807 ETFDHQ16134 617 aa19.15■□□□□ 0.66
TTC28-204ENST00000468807 ZNF311Q5JNZ3 666 aa19.15■□□□□ 0.66
TTC28-204ENST00000468807 TSPO2Q5TGU0 170 aa19.15■□□□□ 0.66
TTC28-204ENST00000468807 AAED1Q7RTV5 226 aa19.15■□□□□ 0.66
TTC28-204ENST00000468807 SERPINA11Q86U17 422 aa19.15■□□□□ 0.66
TTC28-204ENST00000468807 MAPK1IP1LQ8NDC0 245 aa19.15■□□□□ 0.66
TTC28-204ENST00000468807 RADILQ96JH8 1075 aa19.15■□□□□ 0.66
TTC28-204ENST00000468807 TRAF4Q9BUZ4 470 aaPredicted RBP19.15■□□□□ 0.66
TTC28-204ENST00000468807 SPATA9Q9BWV2 254 aa19.15■□□□□ 0.66
TTC28-204ENST00000468807 PAIP1Q9H074 479 aaKnown RBP19.15■□□□□ 0.66
TTC28-204ENST00000468807 RAD21L1Q9H4I0 556 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms