RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 UQCRC1P31930 480 aa13.01□□□□□ -0.33
COL27A1-203ENST00000468565 KDELR2P33947 212 aa13.01□□□□□ -0.33
COL27A1-203ENST00000468565 ARHGDIAP52565 204 aa13.01□□□□□ -0.33
COL27A1-203ENST00000468565 IST1P53990 364 aa13.01□□□□□ -0.33
COL27A1-203ENST00000468565 SUMO3P55854 103 aaPredicted RBP13.01□□□□□ -0.33
COL27A1-203ENST00000468565 RPS3AP61247 264 aaKnown RBP13.01□□□□□ -0.33
COL27A1-203ENST00000468565 FOXF2Q12947 444 aa13.01□□□□□ -0.33
COL27A1-203ENST00000468565 VEZF1Q14119 521 aa13.01□□□□□ -0.33
COL27A1-203ENST00000468565 PLPPR5Q32ZL2 321 aa13.01□□□□□ -0.33
COL27A1-203ENST00000468565 ARHGAP11BQ3KRB8 267 aa13.01□□□□□ -0.33
COL27A1-203ENST00000468565 RBM48Q5RL73 367 aaKnown RBP13.01□□□□□ -0.33
COL27A1-203ENST00000468565 OR2A2Q6IF42 318 aa13.01□□□□□ -0.33
COL27A1-203ENST00000468565 PHOSPHO1Q8TCT1 267 aa13.01□□□□□ -0.33
COL27A1-203ENST00000468565 NEURL3Q96EH8 262 aa13.01□□□□□ -0.33
COL27A1-203ENST00000468565 SH3YL1Q96HL8 342 aaPredicted RBP13.01□□□□□ -0.33
COL27A1-203ENST00000468565 ZNF559Q9BR84 538 aa13.01□□□□□ -0.33
COL27A1-203ENST00000468565 EXD2Q9NVH0 621 aa13.01□□□□□ -0.33
COL27A1-203ENST00000468565 ZNF175Q9Y473 711 aa13.01□□□□□ -0.33
COL27A1-203ENST00000468565 PDZD2O15018 2839 aa13.01□□□□□ -0.33
COL27A1-203ENST00000468565 NPIPA5A0A0B4J1W7 369 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 SLC22A20A6NK97 555 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 NPIPA7E9PJI5 369 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 SEC14L5O43304 696 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 NPIPA8P0DM63 369 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 CLDN20P56880 219 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 ZNF117Q03924 483 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 MYBPHQ13203 477 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 DDX59Q5T1V6 619 aaKnown RBP eCLIP13□□□□□ -0.33
COL27A1-203ENST00000468565 HEPHL1Q6MZM0 1159 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 SHQ1Q6PI26 577 aaKnown RBP13□□□□□ -0.33
COL27A1-203ENST00000468565 PLXDC2Q6UX71 529 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 EIF3MQ7L2H7 374 aaKnown RBP13□□□□□ -0.33
COL27A1-203ENST00000468565 P4HA3Q7Z4N8 544 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 PTOV1Q86YD1 416 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 OIT3Q8WWZ8 545 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 INTS12Q96CB8 462 aaKnown RBP13□□□□□ -0.33
COL27A1-203ENST00000468565 MBOAT4Q96T53 435 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 OR51I1Q9H343 314 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 PIGMQ9H3S5 423 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 IL1RAPQ9NPH3 570 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 MYO9AB2RTY4 2548 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 SHISA8B8ZZ34 492 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 ZNF701M0R085 212 aaPredicted RBP13□□□□□ -0.33
COL27A1-203ENST00000468565 STX11O75558 287 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 TRMUO75648 421 aaKnown RBP13□□□□□ -0.33
COL27A1-203ENST00000468565 FABP3P05413 133 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 EIF1P41567 113 aaKnown RBP13□□□□□ -0.33
COL27A1-203ENST00000468565 P2RX1P51575 399 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 AGFG1P52594 562 aaKnown RBP13□□□□□ -0.33
COL27A1-203ENST00000468565 TOP3AQ13472 1001 aaPredicted RBP13□□□□□ -0.33
COL27A1-203ENST00000468565 IL18R1Q13478 541 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 OR2T5Q6IEZ7 315 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 ZNF773Q6PK81 442 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 GGNQ86UU5 652 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 ERI1Q8IV48 349 aaKnown RBP13□□□□□ -0.33
COL27A1-203ENST00000468565 OR2T29Q8NH02 315 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 HDAC2Q92769 488 aaKnown RBP13□□□□□ -0.33
COL27A1-203ENST00000468565 SLC35A5Q9BS91 424 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 PINK1Q9BXM7 581 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 ZNF350Q9GZX5 532 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 GABARAPL1Q9H0R8 117 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 POLE3Q9NRF9 147 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 ICAM5Q9UMF0 924 aa13□□□□□ -0.33
COL27A1-203ENST00000468565 CSMD2Q7Z408 3487 aa12.99□□□□□ -0.33
COL27A1-203ENST00000468565 ANKRD17O75179 2603 aaKnown RBP12.99□□□□□ -0.33
COL27A1-203ENST00000468565 EEF1E1-BLOC1S5C9J1V9 151 aa12.99□□□□□ -0.33
COL27A1-203ENST00000468565 H0YC42 278 aa12.99□□□□□ -0.33
COL27A1-203ENST00000468565 EEF1E1O43324 174 aaKnown RBP12.99□□□□□ -0.33
COL27A1-203ENST00000468565 CHI3L1P36222 383 aaPredicted RBP12.99□□□□□ -0.33
COL27A1-203ENST00000468565 KIR2DL3P43628 341 aa12.99□□□□□ -0.33
COL27A1-203ENST00000468565 KHKP50053 298 aa12.99□□□□□ -0.33
COL27A1-203ENST00000468565 RAC1P63000 192 aa12.99□□□□□ -0.33
COL27A1-203ENST00000468565 SORDQ00796 357 aa12.99□□□□□ -0.33
COL27A1-203ENST00000468565 ZNF141Q15928 474 aa12.99□□□□□ -0.33
COL27A1-203ENST00000468565 ATAD3BQ5T9A4 648 aa12.99□□□□□ -0.33
COL27A1-203ENST00000468565 CBLL1Q75N03 491 aa12.99□□□□□ -0.33
COL27A1-203ENST00000468565 C16orf62Q7Z3J2 963 aa12.99□□□□□ -0.33
COL27A1-203ENST00000468565 KIF18BQ86Y91 864 aa12.99□□□□□ -0.33
COL27A1-203ENST00000468565 HS3ST5Q8IZT8 346 aa12.99□□□□□ -0.33
COL27A1-203ENST00000468565 GCNT2Q8N0V5 402 aa12.99□□□□□ -0.33
COL27A1-203ENST00000468565 SMPDL3BQ92485 455 aa12.99□□□□□ -0.33
COL27A1-203ENST00000468565 PPP1R14BQ96C90 147 aa12.99□□□□□ -0.33
COL27A1-203ENST00000468565 PAQR5Q9NXK6 330 aaPredicted RBP12.99□□□□□ -0.33
COL27A1-203ENST00000468565 BLOC1S6Q9UL45 172 aa12.99□□□□□ -0.33
COL27A1-203ENST00000468565 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 A0A1W2PNV4 684 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 GTPBP1O00178 669 aaKnown RBP12.98□□□□□ -0.33
COL27A1-203ENST00000468565 EIF4E2O60573 245 aaKnown RBP12.98□□□□□ -0.33
COL27A1-203ENST00000468565 TNFSF13O75888 250 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 OR12D1P0DN82 309 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 FCGR2AP12318 317 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 EEF1B2P24534 225 aaKnown RBP12.98□□□□□ -0.33
COL27A1-203ENST00000468565 ELK4P28324 431 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 ADH6P28332 368 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 PCGF2P35227 344 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 KRTAP10-9P60411 292 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 TMED1Q13445 227 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 RGNQ15493 299 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 CBLN3Q6UW01 205 aa12.98□□□□□ -0.33
COL27A1-203ENST00000468565 KCTD8Q6ZWB6 473 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms