RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 EGR4Q05215 589 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 NTRK2Q16620 822 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 BTBD16Q32M84 506 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 KRT80Q6KB66 452 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 ACSM5Q6NUN0 579 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 ZNF730Q6ZMV8 503 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 ZNF550Q7Z398 422 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 TMPRSS12Q86WS5 348 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 P3H2Q8IVL5 708 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 ZNF786Q8N393 782 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 LINC00471Q8N535 108 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 NLGN4YQ8NFZ3 816 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-208ENST00000468300 PHOSPHO1Q8TCT1 267 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 GNPDA2Q8TDQ7 276 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 TMEM239Q8WW34 195 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 NKD1Q969G9 470 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 ARMC7Q9H6L4 198 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 GALNT9Q9HCQ5 603 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 MYRFQ9Y2G1 1151 aa7.53□□□□□ -1.2
BRCA1-208ENST00000468300 CHCHD2Q9Y6H1 151 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-208ENST00000468300 A0A087WUJ7 227 aa7.52□□□□□ -1.21
BRCA1-208ENST00000468300 C2orf72A6NCS6 295 aa7.52□□□□□ -1.21
BRCA1-208ENST00000468300 PTP4A3O75365 173 aa7.52□□□□□ -1.21
BRCA1-208ENST00000468300 SLX4IPQ5VYV7 408 aa7.52□□□□□ -1.21
BRCA1-208ENST00000468300 TTC33Q6PID6 262 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-208ENST00000468300 RNF113BQ8IZP6 322 aaKnown RBP7.52□□□□□ -1.21
BRCA1-208ENST00000468300 IQCF1Q8N6M8 205 aa7.52□□□□□ -1.21
BRCA1-208ENST00000468300 OR10G3Q8NGC4 313 aa7.52□□□□□ -1.21
BRCA1-208ENST00000468300 PSMF1Q92530 271 aa7.52□□□□□ -1.21
BRCA1-208ENST00000468300 IL17BQ9UHF5 180 aa7.52□□□□□ -1.21
BRCA1-208ENST00000468300 MRTO4Q9UKD2 239 aaKnown RBP7.52□□□□□ -1.21
BRCA1-208ENST00000468300 SLC1A7O00341 560 aa7.52□□□□□ -1.21
BRCA1-208ENST00000468300 ICMTO60725 284 aa7.52□□□□□ -1.21
BRCA1-208ENST00000468300 IDH2P48735 452 aaKnown RBP7.52□□□□□ -1.21
BRCA1-208ENST00000468300 CHAF1BQ13112 559 aa7.52□□□□□ -1.21
BRCA1-208ENST00000468300 DNASE1L3Q13609 305 aa7.52□□□□□ -1.21
BRCA1-208ENST00000468300 EXT1Q16394 746 aa7.52□□□□□ -1.21
BRCA1-208ENST00000468300 ALG10BQ5I7T1 473 aa7.52□□□□□ -1.21
BRCA1-208ENST00000468300 ZNF468Q5VIY5 522 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-208ENST00000468300 SLC30A6Q6NXT4 461 aa7.52□□□□□ -1.21
BRCA1-208ENST00000468300 ULK3Q6PHR2 472 aa7.52□□□□□ -1.21
BRCA1-208ENST00000468300 RASSF6Q6ZTQ3 369 aa7.52□□□□□ -1.21
BRCA1-208ENST00000468300 TMPRSS11FQ6ZWK6 438 aa7.52□□□□□ -1.21
BRCA1-208ENST00000468300 Q8NFD4 153 aa7.52□□□□□ -1.21
BRCA1-208ENST00000468300 OR5L2Q8NGL0 311 aa7.52□□□□□ -1.21
BRCA1-208ENST00000468300 OR5M3Q8NGP4 307 aa7.52□□□□□ -1.21
BRCA1-208ENST00000468300 OR4Q3Q8NH05 313 aa7.52□□□□□ -1.21
BRCA1-208ENST00000468300 TRIM2Q9C040 744 aa7.52□□□□□ -1.21
BRCA1-208ENST00000468300 CACYBPQ9HB71 228 aaKnown RBP7.52□□□□□ -1.21
BRCA1-208ENST00000468300 ZFP57Q9NU63 452 aa7.52□□□□□ -1.21
BRCA1-208ENST00000468300 NKIRAS2Q9NYR9 191 aa7.52□□□□□ -1.21
BRCA1-208ENST00000468300 FBXL4Q9UKA2 621 aa7.52□□□□□ -1.21
BRCA1-208ENST00000468300 NCKAP5O14513 1909 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 C21orf140B9A014 251 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 XPNPEP2O43895 674 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 RAD1O60671 282 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 ITGA10O75578 1167 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 CEACAM1P13688 526 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 G0S2P27469 103 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 FMO3P31513 532 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 DLSTP36957 453 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 SOX3P41225 446 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 RBM34P42696 430 aaKnown RBP7.51□□□□□ -1.21
BRCA1-208ENST00000468300 DLX5P56178 289 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 PIGFQ07326 219 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 GALEQ14376 348 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 HABP2Q14520 560 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-208ENST00000468300 INPP5JQ15735 1006 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-208ENST00000468300 SHEQ5VZ18 495 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 ZNF620Q6ZNG0 422 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 SLC46A3Q7Z3Q1 461 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 ZNF227Q86WZ6 799 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 THNSL2Q86YJ6 484 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 TSPAN14Q8NG11 270 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 TEX47Q8TBZ9 253 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 GPR119Q8TDV5 335 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 GPR87Q9BY21 358 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 YTHDF1Q9BYJ9 559 aaKnown RBP7.51□□□□□ -1.21
BRCA1-208ENST00000468300 DPH1Q9BZG8 443 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 ZNF556Q9HAH1 456 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 TMEM27Q9HBJ8 222 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 SLC25A19Q9HC21 320 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 RASSF1Q9NS23 344 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 ACOD1A6NK06 481 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 HPP00738 406 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 IGHEP01854 428 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 CD63P08962 238 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 CDH2P19022 906 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-208ENST00000468300 NRG3P56975 720 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 NUP107P57740 925 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 MLF1P58340 268 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 IL5RAQ01344 420 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 MVKQ03426 396 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 RBM48Q5RL73 367 aaKnown RBP7.51□□□□□ -1.21
BRCA1-208ENST00000468300 EEF1A1P5Q5VTE0 462 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 XAF1Q6GPH4 301 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 ZNF440Q8IYI8 595 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 CADM2Q8N3J6 435 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 SLC15A4Q8N697 577 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 USB1Q9BQ65 265 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms