RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 DLGAP3O95886 979 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 MT-CO3P00414 261 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 UMODP07911 640 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 ASAH2BP0C7U1 165 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 CPEP16870 476 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 CD82P27701 267 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 ADH6P28332 368 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 SOX6P35712 828 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 RPL4P36578 427 aaKnown RBP9.28□□□□□ -0.92
MSH5-213ENST00000468136 LIPAP38571 399 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 EIF1P41567 113 aaKnown RBP9.28□□□□□ -0.92
MSH5-213ENST00000468136 BLVRAP53004 296 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 SLC25A1P53007 311 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 GAS1P54826 345 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 INSM1Q01101 510 aaPredicted RBP9.28□□□□□ -0.92
MSH5-213ENST00000468136 TPBGQ13641 420 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 QPRTQ15274 297 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 TRAM1Q15629 374 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.28□□□□□ -0.92
MSH5-213ENST00000468136 BTBD16Q32M84 506 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 TCEAL6Q6IPX3 200 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 NANOGNBQ7Z5D8 188 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 SCAIQ8N9R8 606 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 GATSQ8NAP1 163 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 SLC37A3Q8NCC5 494 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 UFD1Q92890 307 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 TCEAL3Q969E4 200 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 SPACA9Q96E40 222 aaPredicted RBP9.28□□□□□ -0.92
MSH5-213ENST00000468136 MRGPRX4Q96LA9 322 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 SGCZQ96LD1 299 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 ERMAPQ96PL5 475 aaPredicted RBP9.28□□□□□ -0.92
MSH5-213ENST00000468136 ASPNQ9BXN1 380 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 POTEKPQ9BYX7 375 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 NAA50Q9GZZ1 169 aaKnown RBP9.28□□□□□ -0.92
MSH5-213ENST00000468136 PTGES2Q9H7Z7 377 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 SERINC1Q9NRX5 453 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 NDUFB11Q9NX14 153 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 CCDC59Q9P031 241 aaKnown RBP9.28□□□□□ -0.92
MSH5-213ENST00000468136 SSR3Q9UNL2 185 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 EYSQ5T1H1 3165 aa9.28□□□□□ -0.92
MSH5-213ENST00000468136 TMED7-TICAM2A0A0A6YYA0 188 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 IGHV3-20A0A0C4DH32 117 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 ANKRD33BA6NCL7 494 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 TMEM200CA6NKL6 621 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 J3QRE1 110 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 SCO2O43819 266 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 PRKNO60260 465 aaPredicted RBP9.27□□□□□ -0.93
MSH5-213ENST00000468136 FZD7O75084 574 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 NPIPB7O75200 414 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 PPP1R3DO95685 299 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 HPP00738 406 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 HSMCR30P0CW71 290 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 COX6A1P12074 109 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 ZNF28P17035 718 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 SDHAP31040 664 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 UQCRC1P31930 480 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 RNF144AP50876 292 aaPredicted RBP9.27□□□□□ -0.93
MSH5-213ENST00000468136 ZNF41P51814 821 aaPredicted RBP9.27□□□□□ -0.93
MSH5-213ENST00000468136 MRPL28Q13084 256 aaKnown RBP9.27□□□□□ -0.93
MSH5-213ENST00000468136 CHAF1BQ13112 559 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 DCTN2Q13561 401 aaKnown RBP9.27□□□□□ -0.93
MSH5-213ENST00000468136 FHL1Q13642 323 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 COL9A2Q14055 689 aaPredicted RBP9.27□□□□□ -0.93
MSH5-213ENST00000468136 GGTLC2Q14390 218 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 PON3Q15166 354 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 SGCBQ16585 318 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 COL28A1Q2UY09 1125 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 NDUFAF6Q330K2 333 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 ALG10Q5BKT4 473 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 FAM205BPQ63HN1 556 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 JMJD6Q6NYC1 403 aaPredicted RBP9.27□□□□□ -0.93
MSH5-213ENST00000468136 PLBD1Q6P4A8 553 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 LYPD8Q6UX82 237 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 THSD4Q6ZMP0 1018 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 C10orf53Q8N6V4 93 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 SUMF1Q8NBK3 374 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 GALNT6Q8NCL4 622 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 ZNF248Q8NDW4 579 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 OR5M3Q8NGP4 307 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 DUSP19Q8WTR2 217 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 SLC25A43Q8WUT9 341 aaPredicted RBP9.27□□□□□ -0.93
MSH5-213ENST00000468136 ATOH1Q92858 354 aaPredicted RBP9.27□□□□□ -0.93
MSH5-213ENST00000468136 DDIT4LQ96D03 193 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 SH3YL1Q96HL8 342 aaPredicted RBP9.27□□□□□ -0.93
MSH5-213ENST00000468136 FRMD6Q96NE9 622 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 OPALINQ96PE5 141 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 RASL10BQ96S79 203 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 TEAD3Q99594 435 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 ARHGAP9Q9BRR9 750 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 DCUN1D5Q9BTE7 237 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 WDR12Q9GZL7 423 aaKnown RBP9.27□□□□□ -0.93
MSH5-213ENST00000468136 MMP27Q9H306 513 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 SMOC1Q9H4F8 434 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 METTL7AQ9H8H3 244 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 PLGRKTQ9HBL7 147 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 ASB6Q9NWX5 421 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 KLRF1Q9NZS2 232 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 PPP4R1LQ9P1A2 415 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 STUB1Q9UNE7 303 aa9.27□□□□□ -0.93
MSH5-213ENST00000468136 FARSAQ9Y285 508 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms