RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 CDC42BPBQ9Y5S2 1711 aa2.81□□□□□ -1.96
LRCH3-211ENST00000466054 TRIOBPQ9H2D6 2365 aa2.81□□□□□ -1.96
LRCH3-211ENST00000466054 PRRG1O14668 218 aa2.8□□□□□ -1.96
LRCH3-211ENST00000466054 ARPC3O15145 178 aa2.8□□□□□ -1.96
LRCH3-211ENST00000466054 GMFGO60234 142 aa2.8□□□□□ -1.96
LRCH3-211ENST00000466054 UGT1A9O60656 530 aa2.8□□□□□ -1.96
LRCH3-211ENST00000466054 PFKFB2O60825 505 aa2.8□□□□□ -1.96
LRCH3-211ENST00000466054 IGHV4-34P06331 123 aa2.8□□□□□ -1.96
LRCH3-211ENST00000466054 CCDC130P13994 396 aa2.8□□□□□ -1.96
LRCH3-211ENST00000466054 POU2F1P14859 743 aa2.8□□□□□ -1.96
LRCH3-211ENST00000466054 ZNF44P15621 663 aa2.8□□□□□ -1.96
LRCH3-211ENST00000466054 GCAP28676 217 aa2.8□□□□□ -1.96
LRCH3-211ENST00000466054 SHMT2P34897 504 aa2.8□□□□□ -1.96
LRCH3-211ENST00000466054 CTRLP40313 264 aa2.8□□□□□ -1.96
LRCH3-211ENST00000466054 KLK7P49862 253 aa2.8□□□□□ -1.96
LRCH3-211ENST00000466054 EFNB2P52799 333 aa2.8□□□□□ -1.96
LRCH3-211ENST00000466054 SPIBQ01892 262 aa2.8□□□□□ -1.96
LRCH3-211ENST00000466054 SLC15A2Q16348 729 aa2.8□□□□□ -1.96
LRCH3-211ENST00000466054 ZNF630Q2M218 657 aaPredicted RBP2.8□□□□□ -1.96
LRCH3-211ENST00000466054 PARP15Q460N3 678 aa2.8□□□□□ -1.96
LRCH3-211ENST00000466054 SAMD4BQ5PRF9 694 aaKnown RBP2.8□□□□□ -1.96
LRCH3-211ENST00000466054 C1orf220Q5T0J3 134 aa2.8□□□□□ -1.96
LRCH3-211ENST00000466054 IGFL2Q6UWQ7 119 aa2.8□□□□□ -1.96
LRCH3-211ENST00000466054 OR10G3Q8NGC4 313 aa2.8□□□□□ -1.96
LRCH3-211ENST00000466054 MAIP1Q8WWC4 291 aa2.8□□□□□ -1.96
LRCH3-211ENST00000466054 MYDGFQ969H8 173 aa2.8□□□□□ -1.96
LRCH3-211ENST00000466054 PAGE5Q96GU1 130 aa2.8□□□□□ -1.96
LRCH3-211ENST00000466054 VCPKMTQ9H867 229 aa2.8□□□□□ -1.96
LRCH3-211ENST00000466054 SMOXQ9NWM0 555 aa2.8□□□□□ -1.96
LRCH3-211ENST00000466054 POLDIP2Q9Y2S7 368 aa2.8□□□□□ -1.96
LRCH3-211ENST00000466054 RPL36Q9Y3U8 105 aaKnown RBP2.8□□□□□ -1.96
LRCH3-211ENST00000466054 LTBP1Q14766 1721 aa2.79□□□□□ -1.96
LRCH3-211ENST00000466054 IGKV1D-8A0A087WSZ0 117 aa2.79□□□□□ -1.96
LRCH3-211ENST00000466054 METTL21EPA6NDL7 271 aa2.79□□□□□ -1.96
LRCH3-211ENST00000466054 KRTAP4-16G5E9R7 235 aaPredicted RBP2.79□□□□□ -1.96
LRCH3-211ENST00000466054 P04436 131 aa2.79□□□□□ -1.96
LRCH3-211ENST00000466054 NUDT1P36639 197 aa2.79□□□□□ -1.96
LRCH3-211ENST00000466054 RPL13AP40429 203 aaKnown RBP2.79□□□□□ -1.96
LRCH3-211ENST00000466054 GRIA1P42261 906 aa2.79□□□□□ -1.96
LRCH3-211ENST00000466054 CRYBB1P53674 252 aaPredicted RBP2.79□□□□□ -1.96
LRCH3-211ENST00000466054 PKNOX1P55347 436 aa2.79□□□□□ -1.96
LRCH3-211ENST00000466054 TAS2R19P59542 299 aa2.79□□□□□ -1.96
LRCH3-211ENST00000466054 ZNF763Q0D2J5 394 aa2.79□□□□□ -1.96
LRCH3-211ENST00000466054 GRB7Q14451 532 aa2.79□□□□□ -1.96
LRCH3-211ENST00000466054 EXOC3L2Q2M3D2 409 aa2.79□□□□□ -1.96
LRCH3-211ENST00000466054 TMIGD1Q6UXZ0 262 aa2.79□□□□□ -1.96
LRCH3-211ENST00000466054 Q6ZPB1 254 aaPredicted RBP2.79□□□□□ -1.96
LRCH3-211ENST00000466054 PRSS41Q7RTY9 318 aa2.79□□□□□ -1.96
LRCH3-211ENST00000466054 TMEM123Q8N131 208 aa2.79□□□□□ -1.96
LRCH3-211ENST00000466054 STEAP2Q8NFT2 490 aa2.79□□□□□ -1.96
LRCH3-211ENST00000466054 BLOC1S5Q8TDH9 187 aa2.79□□□□□ -1.96
LRCH3-211ENST00000466054 SDHCQ99643 169 aaPredicted RBP2.79□□□□□ -1.96
LRCH3-211ENST00000466054 P2RY13Q9BPV8 354 aa2.79□□□□□ -1.96
LRCH3-211ENST00000466054 CHRDL1Q9BU40 450 aa2.79□□□□□ -1.96
LRCH3-211ENST00000466054 C20orf85Q9H1P6 137 aa2.79□□□□□ -1.96
LRCH3-211ENST00000466054 NXF3Q9H4D5 531 aaKnown RBP2.79□□□□□ -1.96
LRCH3-211ENST00000466054 REEP4Q9H6H4 257 aa2.79□□□□□ -1.96
LRCH3-211ENST00000466054 SMPD3Q9NY59 655 aaPredicted RBP2.79□□□□□ -1.96
LRCH3-211ENST00000466054 TIMM10BQ9Y5J6 103 aa2.79□□□□□ -1.96
LRCH3-211ENST00000466054 A6NIZ1 184 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 GJE1A6NN92 205 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 H0YCG3 227 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 POLR2DO15514 142 aaKnown RBP2.78□□□□□ -1.96
LRCH3-211ENST00000466054 PRKAB2O43741 272 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 CA11O75493 328 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 STAMBPO95630 424 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 PRB2P02812 416 aaPredicted RBP2.78□□□□□ -1.96
LRCH3-211ENST00000466054 DBTP11182 482 aaKnown RBP2.78□□□□□ -1.96
LRCH3-211ENST00000466054 NPR2P20594 1047 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 ATP6V1B2P21281 511 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 CSNK1DP48730 415 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 CASP4P49662 377 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 DLX1P56177 255 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 PRPS1P60891 318 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 RAP1BP61224 184 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 TGFBR3Q03167 851 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 KLRB1Q12918 225 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 MICBQ29980 383 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 CCDC152Q4G0S7 254 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 SFT2D3Q587I9 215 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 TIGD3Q6B0B8 471 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 HSDL2Q6YN16 418 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 CCDC65Q8IXS2 484 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 C6orf223Q8N319 242 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 PNKDQ8N490 385 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 FAM71E2Q8N5Q1 922 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 OR6C4Q8NGE1 309 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 UBE2E3Q969T4 207 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 TRIM44Q96DX7 344 aaPredicted RBP2.78□□□□□ -1.96
LRCH3-211ENST00000466054 TM4SF19Q96DZ7 209 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 COQ2Q96H96 371 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 KCNA7Q96RP8 456 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 TSG101Q99816 390 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 ZSCAN5AQ9BUG6 496 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 PARD6BQ9BYG5 372 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 NHEJ1Q9H9Q4 299 aaPredicted RBP2.78□□□□□ -1.96
LRCH3-211ENST00000466054 RAB18Q9NP72 206 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 MTRF1LQ9UGC7 380 aaKnown RBP2.78□□□□□ -1.96
LRCH3-211ENST00000466054 ZNF225Q9UK10 706 aa2.78□□□□□ -1.96
LRCH3-211ENST00000466054 STAP1Q9ULZ2 295 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms