RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 CCR1P32246 355 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 HNRNPA3P51991 378 aaKnown RBP3.8□□□□□ -1.8
PTCD3-205ENST00000464541 UBE2HP62256 183 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 TPSAB1Q15661 275 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 STK11Q15831 433 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 SYPL1Q16563 259 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 MAPK6Q16659 721 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 SLC5A12Q1EHB4 618 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 FBXO48Q5FWF7 155 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 Q6P435 159 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 FAM220AQ7Z4H9 259 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 VRK2Q86Y07 508 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 PSTKQ8IV42 348 aaKnown RBP3.8□□□□□ -1.8
PTCD3-205ENST00000464541 NECAB1Q8N987 351 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 OR8K3Q8NH51 312 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 NEIL3Q8TAT5 605 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 SLC22A8Q8TCC7 542 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 MS4A14Q96JA4 679 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 SENP8Q96LD8 212 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 PSKH2Q96QS6 385 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 NAT10Q9H0A0 1025 aaKnown RBP3.8□□□□□ -1.8
PTCD3-205ENST00000464541 MAGT1Q9H0U3 335 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 RHOJQ9H4E5 214 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 MMP26Q9NRE1 261 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 ETNK2Q9NVF9 386 aa3.8□□□□□ -1.8
PTCD3-205ENST00000464541 A0A1W2PNV4 684 aa3.79□□□□□ -1.8
PTCD3-205ENST00000464541 HELTA6NFD8 242 aa3.79□□□□□ -1.8
PTCD3-205ENST00000464541 FCN1O00602 326 aa3.79□□□□□ -1.8
PTCD3-205ENST00000464541 LANCL1O43813 399 aa3.79□□□□□ -1.8
PTCD3-205ENST00000464541 FLOT1O75955 427 aa3.79□□□□□ -1.8
PTCD3-205ENST00000464541 F10P00742 488 aa3.79□□□□□ -1.8
PTCD3-205ENST00000464541 STAG3L3P0CL85 134 aa3.79□□□□□ -1.8
PTCD3-205ENST00000464541 RALBP11234 206 aa3.79□□□□□ -1.8
PTCD3-205ENST00000464541 PGCP20142 388 aa3.79□□□□□ -1.8
PTCD3-205ENST00000464541 NUP62P37198 522 aaPredicted RBP3.79□□□□□ -1.8
PTCD3-205ENST00000464541 CEBPDP49716 269 aaPredicted RBP3.79□□□□□ -1.8
PTCD3-205ENST00000464541 SUCLG1P53597 346 aaKnown RBP3.79□□□□□ -1.8
PTCD3-205ENST00000464541 AIF1P55008 147 aa3.79□□□□□ -1.8
PTCD3-205ENST00000464541 APOC4P55056 127 aa3.79□□□□□ -1.8
PTCD3-205ENST00000464541 CCDC173Q0VFZ6 552 aa3.79□□□□□ -1.8
PTCD3-205ENST00000464541 ARHGAP19Q14CB8 494 aa3.79□□□□□ -1.8
PTCD3-205ENST00000464541 SSX2Q16385 188 aa3.79□□□□□ -1.8
PTCD3-205ENST00000464541 CCDC57Q2TAC2 916 aa3.79□□□□□ -1.8
PTCD3-205ENST00000464541 C1orf185Q5T7R7 199 aa3.79□□□□□ -1.8
PTCD3-205ENST00000464541 ARMC12Q5T9G4 340 aa3.79□□□□□ -1.8
PTCD3-205ENST00000464541 ATF7IP2Q5U623 682 aa3.79□□□□□ -1.8
PTCD3-205ENST00000464541 EFL1Q7Z2Z2 1120 aaKnown RBP3.79□□□□□ -1.8
PTCD3-205ENST00000464541 SVOPLQ8N434 492 aa3.79□□□□□ -1.8
PTCD3-205ENST00000464541 SPERTQ8NA61 448 aa3.79□□□□□ -1.8
PTCD3-205ENST00000464541 OR52I1Q8NGK6 324 aa3.79□□□□□ -1.8
PTCD3-205ENST00000464541 EDEM2Q9BV94 578 aa3.79□□□□□ -1.8
PTCD3-205ENST00000464541 GPR61Q9BZJ8 451 aa3.79□□□□□ -1.8
PTCD3-205ENST00000464541 SMYD3Q9H7B4 428 aa3.79□□□□□ -1.8
PTCD3-205ENST00000464541 NUDT15Q9NV35 164 aa3.79□□□□□ -1.8
PTCD3-205ENST00000464541 CLEC4AQ9UMR7 237 aa3.79□□□□□ -1.8
PTCD3-205ENST00000464541 PTCH1Q13635 1447 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 TMEM94Q12767 1356 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 KANK1Q14678 1352 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 IGHV2-70DA0A0C4DH43 119 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 FAM240BA0A1B0GVZ2 78 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 ZNF716A6NP11 495 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 E7ESA3 106 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 GOLGA8SH3BPF8 625 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 KIF2AO00139 706 aaPredicted RBP3.78□□□□□ -1.8
PTCD3-205ENST00000464541 NDUFS8O00217 210 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 WRBO00258 174 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 HCRTR1O43613 425 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 IGKV3-11P04433 115 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 ZNF735P0CB33 412 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 ZNF853P0CG23 659 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 DRD5P21918 477 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 CHI3L1P36222 383 aaPredicted RBP3.78□□□□□ -1.8
PTCD3-205ENST00000464541 ACADVLP49748 655 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 DOC2AQ14183 400 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 KHDRBS2Q5VWX1 349 aaKnown RBP3.78□□□□□ -1.8
PTCD3-205ENST00000464541 TIFABQ6ZNK6 161 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 DPY19L4Q7Z388 723 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 TMCO2Q7Z6W1 182 aaPredicted RBP3.78□□□□□ -1.8
PTCD3-205ENST00000464541 UBE2J2Q8N2K1 259 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 MTURNQ8N3F0 131 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 C20orf203Q8NBC4 194 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 PNPT1Q8TCS8 783 aaKnown RBP3.78□□□□□ -1.8
PTCD3-205ENST00000464541 TCTEX1D2Q8WW35 142 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 SRSF12Q8WXF0 261 aaKnown RBP3.78□□□□□ -1.8
PTCD3-205ENST00000464541 C19orf60Q96EN9 201 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 SLC6A7Q99884 636 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 GAL3ST1Q99999 423 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 BCL7BQ9BQE9 202 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 SLC39A3Q9BRY0 314 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 ALG12Q9BV10 488 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 ZNF331Q9NQX6 463 aaPredicted RBP3.78□□□□□ -1.8
PTCD3-205ENST00000464541 HYPKQ9NX55 129 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 WARS2Q9UGM6 360 aaKnown RBP3.78□□□□□ -1.8
PTCD3-205ENST00000464541 RAB26Q9ULW5 256 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 STK38LQ9Y2H1 464 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 GSTK1Q9Y2Q3 226 aa3.78□□□□□ -1.8
PTCD3-205ENST00000464541 PLEKHG2Q9H7P9 1386 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 FRMPD4Q14CM0 1322 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 LOC100653049A0A140TA62 436 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 CETN3O15182 167 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms