RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 ISPDA4D126 451 aa13.27□□□□□ -0.29
COL5A1-205ENST00000464187 NPIPB9F8W1W9 429 aa13.27□□□□□ -0.29
COL5A1-205ENST00000464187 LALBAP00709 142 aa13.27□□□□□ -0.29
COL5A1-205ENST00000464187 RAB40ALP0C0E4 278 aa13.27□□□□□ -0.29
COL5A1-205ENST00000464187 TGM4P49221 684 aa13.27□□□□□ -0.29
COL5A1-205ENST00000464187 RORCP51449 518 aa13.27□□□□□ -0.29
COL5A1-205ENST00000464187 SLC26A5P58743 744 aa13.27□□□□□ -0.29
COL5A1-205ENST00000464187 RPS18P62269 152 aaKnown RBP13.27□□□□□ -0.29
COL5A1-205ENST00000464187 FGFBP1Q14512 234 aa13.27□□□□□ -0.29
COL5A1-205ENST00000464187 ZNF141Q15928 474 aa13.27□□□□□ -0.29
COL5A1-205ENST00000464187 STEAP3Q658P3 488 aa13.27□□□□□ -0.29
COL5A1-205ENST00000464187 C22orf42Q6IC83 251 aa13.27□□□□□ -0.29
COL5A1-205ENST00000464187 NIPAL3Q6P499 406 aa13.27□□□□□ -0.29
COL5A1-205ENST00000464187 PLBD1Q6P4A8 553 aa13.27□□□□□ -0.29
COL5A1-205ENST00000464187 GID4Q8IVV7 300 aa13.27□□□□□ -0.29
COL5A1-205ENST00000464187 LNX2Q8N448 690 aa13.27□□□□□ -0.29
COL5A1-205ENST00000464187 SIRT6Q8N6T7 355 aa13.27□□□□□ -0.29
COL5A1-205ENST00000464187 C17orf47Q8NEP4 570 aa13.27□□□□□ -0.29
COL5A1-205ENST00000464187 ZNF426Q9BUY5 554 aa13.27□□□□□ -0.29
COL5A1-205ENST00000464187 JAM3Q9BX67 310 aa13.27□□□□□ -0.29
COL5A1-205ENST00000464187 FN3KQ9H479 309 aa13.27□□□□□ -0.29
COL5A1-205ENST00000464187 MED20Q9H944 212 aa13.27□□□□□ -0.29
COL5A1-205ENST00000464187 HS3ST3B1Q9Y662 390 aa13.27□□□□□ -0.29
COL5A1-205ENST00000464187 CNOT1A5YKK6 2376 aaKnown RBP13.27□□□□□ -0.29
COL5A1-205ENST00000464187 MPDZO75970 2070 aa13.26□□□□□ -0.29
COL5A1-205ENST00000464187 PTPRZ1P23471 2315 aaPredicted RBP13.26□□□□□ -0.29
COL5A1-205ENST00000464187 IGHV1-45A0A0A0MS14 117 aa13.26□□□□□ -0.29
COL5A1-205ENST00000464187 J3QRE1 110 aa13.26□□□□□ -0.29
COL5A1-205ENST00000464187 TO15178 435 aa13.26□□□□□ -0.29
COL5A1-205ENST00000464187 CDRT1O95170 752 aa13.26□□□□□ -0.29
COL5A1-205ENST00000464187 RCBTB2O95199 551 aa13.26□□□□□ -0.29
COL5A1-205ENST00000464187 NGFRP08138 427 aa13.26□□□□□ -0.29
COL5A1-205ENST00000464187 BMP7P18075 431 aa13.26□□□□□ -0.29
COL5A1-205ENST00000464187 GABREP78334 506 aa13.26□□□□□ -0.29
COL5A1-205ENST00000464187 PCOLCEQ15113 449 aa13.26□□□□□ -0.29
COL5A1-205ENST00000464187 ZNF791Q3KP31 576 aaPredicted RBP13.26□□□□□ -0.29
COL5A1-205ENST00000464187 SPANXN2Q5MJ10 180 aa13.26□□□□□ -0.29
COL5A1-205ENST00000464187 SLC35F1Q5T1Q4 408 aa13.26□□□□□ -0.29
COL5A1-205ENST00000464187 RPL13AP3Q6NVV1 102 aa13.26□□□□□ -0.29
COL5A1-205ENST00000464187 SMARCD3Q6STE5 483 aa13.26□□□□□ -0.29
COL5A1-205ENST00000464187 PRR22Q8IZ63 422 aa13.26□□□□□ -0.29
COL5A1-205ENST00000464187 CDK20Q8IZL9 346 aa13.26□□□□□ -0.29
COL5A1-205ENST00000464187 KLHL36Q8N4N3 616 aa13.26□□□□□ -0.29
COL5A1-205ENST00000464187 ZFP41Q8N8Y5 198 aa13.26□□□□□ -0.29
COL5A1-205ENST00000464187 ZNF441Q8N8Z8 693 aa13.26□□□□□ -0.29
COL5A1-205ENST00000464187 PSD4Q8NDX1 1056 aa13.26□□□□□ -0.29
COL5A1-205ENST00000464187 NLGN4YQ8NFZ3 816 aaPredicted RBP13.26□□□□□ -0.29
COL5A1-205ENST00000464187 OTULINQ96BN8 352 aa13.26□□□□□ -0.29
COL5A1-205ENST00000464187 NEURL2Q9BR09 285 aa13.26□□□□□ -0.29
COL5A1-205ENST00000464187 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.26□□□□□ -0.29
COL5A1-205ENST00000464187 ERVK13-1Q9NX77 482 aa13.26□□□□□ -0.29
COL5A1-205ENST00000464187 H2AFY2Q9P0M6 372 aaPredicted RBP13.26□□□□□ -0.29
COL5A1-205ENST00000464187 FARSAQ9Y285 508 aaKnown RBP13.26□□□□□ -0.29
COL5A1-205ENST00000464187 CAB39Q9Y376 341 aaPredicted RBP13.26□□□□□ -0.29
COL5A1-205ENST00000464187 UGT2A1Q9Y4X1 527 aa13.26□□□□□ -0.29
COL5A1-205ENST00000464187 PCDHGB6Q9Y5F9 930 aa13.26□□□□□ -0.29
COL5A1-205ENST00000464187 TRAV27A0A087WT01 109 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 TRBV11-1A0A0K0K1C0 115 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 ZC3H12DA2A288 527 aaKnown RBP13.25□□□□□ -0.29
COL5A1-205ENST00000464187 SLC30A4O14863 429 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 IL33O95760 270 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 IL1AP01583 271 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 CLEC2LP0C7M8 214 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 SAGP10523 405 aaPredicted RBP13.25□□□□□ -0.29
COL5A1-205ENST00000464187 GABRA5P31644 462 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 ATP12AP54707 1039 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 PSMD4P55036 377 aaKnown RBP13.25□□□□□ -0.29
COL5A1-205ENST00000464187 RPS15P62841 145 aaKnown RBP13.25□□□□□ -0.29
COL5A1-205ENST00000464187 MXD1Q05195 221 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 KIRREL2Q6UWL6 708 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 B3GLCTQ6Y288 498 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 OR4C3Q8NH37 302 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 OR52N1Q8NH53 320 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 NUBPLQ8TB37 319 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 THAP3Q8WTV1 239 aaPredicted RBP13.25□□□□□ -0.29
COL5A1-205ENST00000464187 SLC25A46Q96AG3 418 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 SECISBP2Q96T21 854 aaKnown RBP13.25□□□□□ -0.29
COL5A1-205ENST00000464187 SDHCQ99643 169 aaPredicted RBP13.25□□□□□ -0.29
COL5A1-205ENST00000464187 TM9SF2Q99805 663 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 IFT27Q9BW83 186 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 HCAR1Q9BXC0 346 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 TRIM2Q9C040 744 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 B3GNT4Q9C0J1 378 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 TNFRSF10DQ9UBN6 386 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 MRTO4Q9UKD2 239 aaKnown RBP13.25□□□□□ -0.29
COL5A1-205ENST00000464187 STMND1H3BQB6 276 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 HCN1O60741 890 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 PTP4A3O75365 173 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 COX6A1P12074 109 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 ABCD3P28288 659 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 TNFSF8P32971 234 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 RBM34P42696 430 aaKnown RBP13.25□□□□□ -0.29
COL5A1-205ENST00000464187 FOXK2Q01167 660 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 FABP5Q01469 135 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 BTBD16Q32M84 506 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 NDUFAF6Q330K2 333 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 MEPCEQ7L2J0 689 aaKnown RBP13.25□□□□□ -0.29
COL5A1-205ENST00000464187 LSMEM1Q8N8F7 131 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 SYT14Q8NB59 555 aa13.25□□□□□ -0.29
COL5A1-205ENST00000464187 OR51G2Q8NGK0 314 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms