RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 AP4B1Q9Y6B7 739 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 ZNF407Q9C0G0 2248 aa12.92□□□□□ -0.34
COL6A1-202ENST00000463060 NBEAQ8NFP9 2946 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 TRAV36DV7A0A075B6V5 113 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 ENO4A6NNW6 628 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 E9PQ18 207 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 H0YJX3 145 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 HCN1O60741 890 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 PTP4A3O75365 173 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 OR7A10O76100 309 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 HPRP00739 348 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 ADAP00813 363 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 IMPDH2P12268 514 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 IFI30P13284 250 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 BMP7P18075 431 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 FPR3P25089 353 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 IFNGR2P38484 337 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 LHX2P50458 406 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 CRYZQ08257 329 aaKnown RBP12.91□□□□□ -0.34
COL6A1-202ENST00000463060 COX10Q12887 443 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 TSPAN31Q12999 210 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 SNCBQ16143 134 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 BCL2A1Q16548 175 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 ZNF74Q16587 644 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.91□□□□□ -0.34
COL6A1-202ENST00000463060 CTU2Q2VPK5 515 aaKnown RBP12.91□□□□□ -0.34
COL6A1-202ENST00000463060 TMEM176BQ3YBM2 270 aaPredicted RBP12.91□□□□□ -0.34
COL6A1-202ENST00000463060 VASNQ6EMK4 673 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 GGNQ86UU5 652 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 MEX3DQ86XN8 651 aaKnown RBP12.91□□□□□ -0.34
COL6A1-202ENST00000463060 MFSD8Q8NHS3 518 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 DDIT4LQ96D03 193 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 FAM46AQ96IP4 442 aaKnown RBP12.91□□□□□ -0.34
COL6A1-202ENST00000463060 ADGRG7Q96K78 797 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 SFXN2Q96NB2 322 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 MOGAT1Q96PD6 335 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 RBM4BQ9BQ04 359 aaKnown RBP12.91□□□□□ -0.34
COL6A1-202ENST00000463060 RBM4Q9BWF3 364 aaKnown RBP12.91□□□□□ -0.34
COL6A1-202ENST00000463060 HDGFL3Q9Y3E1 203 aa12.91□□□□□ -0.34
COL6A1-202ENST00000463060 SPIN1Q9Y657 262 aaPredicted RBP12.91□□□□□ -0.34
COL6A1-202ENST00000463060 TRGV5A0A0B4J1U4 118 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 A0A0J9YW62 118 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 LIPT2A6NK58 231 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 LRRN3E7EW58 273 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 KPNA4O00629 521 aaPredicted RBP12.9□□□□□ -0.34
COL6A1-202ENST00000463060 TFECO14948 347 aaPredicted RBP12.9□□□□□ -0.34
COL6A1-202ENST00000463060 OR2T1O43869 369 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 CH25HO95992 272 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 ACTL6AO96019 429 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 CRYABP02511 175 aaKnown RBP12.9□□□□□ -0.34
COL6A1-202ENST00000463060 ASAH2BP0C7U1 165 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 PEPDP12955 493 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 STARP49675 285 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 SUCLG1P53597 346 aaKnown RBP12.9□□□□□ -0.34
COL6A1-202ENST00000463060 FXYD6P3P58550 94 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 ALDH6A1Q02252 535 aaKnown RBP12.9□□□□□ -0.34
COL6A1-202ENST00000463060 C19orf57Q0VDD7 668 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 MYBPHQ13203 477 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 FAM69AQ5T7M9 428 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 KLHL17Q6TDP4 642 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 CHERPQ8IWX8 916 aaKnown RBP12.9□□□□□ -0.34
COL6A1-202ENST00000463060 CDK20Q8IZL9 346 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 PARP8Q8N3A8 854 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 LRRC17Q8N6Y2 441 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 ATG16L2Q8NAA4 619 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 MAGEE2Q8TD90 523 aaPredicted RBP12.9□□□□□ -0.34
COL6A1-202ENST00000463060 DNAJC9Q8WXX5 260 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 SDCCAG3Q96C92 435 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 SGTBQ96EQ0 304 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 UCK2Q9BZX2 261 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 TMEM185BQ9H7F4 350 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 LUZP4Q9P127 313 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 SPRR3Q9UBC9 169 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 TRAPPC4Q9Y296 219 aa12.9□□□□□ -0.34
COL6A1-202ENST00000463060 DNAJC13O75165 2243 aa12.89□□□□□ -0.35
COL6A1-202ENST00000463060 H0YC42 278 aa12.89□□□□□ -0.35
COL6A1-202ENST00000463060 H3BML4 177 aa12.89□□□□□ -0.35
COL6A1-202ENST00000463060 MITFO75030 526 aaPredicted RBP12.89□□□□□ -0.35
COL6A1-202ENST00000463060 MT-ATP6P00846 226 aa12.89□□□□□ -0.35
COL6A1-202ENST00000463060 OPN1LWP04000 364 aa12.89□□□□□ -0.35
COL6A1-202ENST00000463060 POU2F1P14859 743 aa12.89□□□□□ -0.35
COL6A1-202ENST00000463060 CPN1P15169 458 aa12.89□□□□□ -0.35
COL6A1-202ENST00000463060 ZNF708P17019 499 aa12.89□□□□□ -0.35
COL6A1-202ENST00000463060 FUT1P19526 365 aa12.89□□□□□ -0.35
COL6A1-202ENST00000463060 GSTM3P21266 225 aa12.89□□□□□ -0.35
COL6A1-202ENST00000463060 VHLP40337 213 aa12.89□□□□□ -0.35
COL6A1-202ENST00000463060 GPR4P46093 362 aa12.89□□□□□ -0.35
COL6A1-202ENST00000463060 RPS5P46782 204 aaKnown RBP12.89□□□□□ -0.35
COL6A1-202ENST00000463060 TPD52P55327 224 aaPredicted RBP12.89□□□□□ -0.35
COL6A1-202ENST00000463060 CLDN18P56856 261 aa12.89□□□□□ -0.35
COL6A1-202ENST00000463060 CLDN20P56880 219 aa12.89□□□□□ -0.35
COL6A1-202ENST00000463060 KLRB1Q12918 225 aa12.89□□□□□ -0.35
COL6A1-202ENST00000463060 ZNF239Q16600 458 aaKnown RBP12.89□□□□□ -0.35
COL6A1-202ENST00000463060 TMPPEQ6ZT21 453 aa12.89□□□□□ -0.35
COL6A1-202ENST00000463060 RASSF6Q6ZTQ3 369 aa12.89□□□□□ -0.35
COL6A1-202ENST00000463060 KIF18BQ86Y91 864 aa12.89□□□□□ -0.35
COL6A1-202ENST00000463060 GALNT4Q8N4A0 578 aa12.89□□□□□ -0.35
COL6A1-202ENST00000463060 TEX19Q8NA77 164 aa12.89□□□□□ -0.35
COL6A1-202ENST00000463060 ATP6V1C2Q8NEY4 427 aa12.89□□□□□ -0.35
COL6A1-202ENST00000463060 ABTB1Q969K4 478 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms