RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 MEPEQ9NQ76 525 aaPredicted RBP17.2■□□□□ 0.34
XPA-202ENST00000462523 TRAPPC4Q9Y296 219 aa17.2■□□□□ 0.34
XPA-202ENST00000462523 DOCK7Q96N67 2140 aa17.2■□□□□ 0.34
XPA-202ENST00000462523 LIPT2A6NK58 231 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 ZNF814B7Z6K7 855 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 FTCDNL1E5RQL4 147 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 J3QKU1 62 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 SULT2B1O00204 365 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 CCL21O00585 134 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 AQP8O94778 261 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 GPIP06744 558 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 HOXD4P09016 255 aaPredicted RBP17.19■□□□□ 0.34
XPA-202ENST00000462523 GLI4P10075 376 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 RAP2AP10114 183 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 NQO1P15559 274 aaKnown RBP17.19■□□□□ 0.34
XPA-202ENST00000462523 ITGA2P17301 1181 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 CASP6P55212 293 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 CHRNB3Q05901 458 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 LTBQ06643 244 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 SGCBQ16585 318 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 C4orf17Q53FE4 359 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 CYP4Z1Q86W10 505 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 C9orf106Q8NAJ2 232 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 POP5Q969H6 163 aaKnown RBP17.19■□□□□ 0.34
XPA-202ENST00000462523 FUZQ9BT04 418 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 AURKCQ9UQB9 309 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 FAM32AQ9Y421 112 aaKnown RBP17.19■□□□□ 0.34
XPA-202ENST00000462523 TESMINQ9Y4I5 508 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 MED12LQ86YW9 2145 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 IGHV3-15A0A0B4J1V0 119 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 MBD3L4A6NDZ8 208 aaPredicted RBP17.19■□□□□ 0.34
XPA-202ENST00000462523 MBD3L3A6NE82 208 aaPredicted RBP17.19■□□□□ 0.34
XPA-202ENST00000462523 MBD3L5A6NJ08 208 aaPredicted RBP17.19■□□□□ 0.34
XPA-202ENST00000462523 SLC22A20A6NK97 555 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 ANKRD65E5RJM6 399 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 LRRN3E7EW58 273 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 SMAD9O15198 467 aaKnown RBP17.19■□□□□ 0.34
XPA-202ENST00000462523 FZD7O75084 574 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 CIB2O75838 187 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 UMPSP11172 480 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 ENPP1P22413 925 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 IDUAP35475 653 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 NUP107P57740 925 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 PDSS1Q5T2R2 415 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 PFN4Q8NHR9 129 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 MBD3L2Q8NHZ7 208 aaPredicted RBP17.19■□□□□ 0.34
XPA-202ENST00000462523 SLC7A13Q8TCU3 470 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 TMEM239Q8WW34 195 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 ROBO4Q8WZ75 1007 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 CPNE4Q96A23 557 aaPredicted RBP17.19■□□□□ 0.34
XPA-202ENST00000462523 CHID1Q9BWS9 393 aa17.19■□□□□ 0.34
XPA-202ENST00000462523 PAQR5Q9NXK6 330 aaPredicted RBP17.19■□□□□ 0.34
XPA-202ENST00000462523 ERRFI1Q9UJM3 462 aaPredicted RBP17.19■□□□□ 0.34
XPA-202ENST00000462523 MYO7BQ6PIF6 2116 aa17.18■□□□□ 0.34
XPA-202ENST00000462523 TRAV36DV7A0A075B6V5 113 aa17.18■□□□□ 0.34
XPA-202ENST00000462523 TRBV4-1A0A0J9YWV2 114 aa17.18■□□□□ 0.34
XPA-202ENST00000462523 A0A1W2PRQ8 180 aa17.18■□□□□ 0.34
XPA-202ENST00000462523 KPNA4O00629 521 aaPredicted RBP17.18■□□□□ 0.34
XPA-202ENST00000462523 PIP5K1CO60331 668 aa17.18■□□□□ 0.34
XPA-202ENST00000462523 H1F0P07305 194 aaKnown RBP17.18■□□□□ 0.34
XPA-202ENST00000462523 FPR1P21462 350 aa17.18■□□□□ 0.34
XPA-202ENST00000462523 RBM34P42696 430 aaKnown RBP17.18■□□□□ 0.34
XPA-202ENST00000462523 H3F3AP84243 136 aa17.18■□□□□ 0.34
XPA-202ENST00000462523 SRSF1Q07955 248 aaKnown RBP eCLIP17.18■□□□□ 0.34
XPA-202ENST00000462523 PMPCAQ10713 525 aa17.18■□□□□ 0.34
XPA-202ENST00000462523 DGCR6Q14129 220 aa17.18■□□□□ 0.34
XPA-202ENST00000462523 KPNB1Q14974 876 aaKnown RBP17.18■□□□□ 0.34
XPA-202ENST00000462523 TRAM2Q15035 370 aa17.18■□□□□ 0.34
XPA-202ENST00000462523 OR7A5Q15622 319 aa17.18■□□□□ 0.34
XPA-202ENST00000462523 TTC33Q6PID6 262 aaPredicted RBP17.18■□□□□ 0.34
XPA-202ENST00000462523 TBPL2Q6SJ96 375 aa17.18■□□□□ 0.34
XPA-202ENST00000462523 CHMP1BQ7LBR1 199 aa17.18■□□□□ 0.34
XPA-202ENST00000462523 NAXEQ8NCW5 288 aa17.18■□□□□ 0.34
XPA-202ENST00000462523 PAPD5Q8NDF8 572 aaKnown RBP17.18■□□□□ 0.34
XPA-202ENST00000462523 WNT2BQ93097 391 aa17.18■□□□□ 0.34
XPA-202ENST00000462523 MOGAT1Q96PD6 335 aa17.18■□□□□ 0.34
XPA-202ENST00000462523 C20orf141Q9NUB4 165 aa17.18■□□□□ 0.34
XPA-202ENST00000462523 CCM2LQ9NUG4 571 aaPredicted RBP17.18■□□□□ 0.34
XPA-202ENST00000462523 VNN3Q9NY84 501 aa17.18■□□□□ 0.34
XPA-202ENST00000462523 SEC14L4Q9UDX3 406 aa17.18■□□□□ 0.34
XPA-202ENST00000462523 ZNF175Q9Y473 711 aa17.18■□□□□ 0.34
XPA-202ENST00000462523 NCOA6Q14686 2063 aaPredicted RBP17.18■□□□□ 0.34
XPA-202ENST00000462523 HELZ2Q9BYK8 2649 aaKnown RBP17.17■□□□□ 0.34
XPA-202ENST00000462523 GCN1Q92616 2671 aaKnown RBP17.17■□□□□ 0.34
XPA-202ENST00000462523 A0A087WUU8 490 aa17.17■□□□□ 0.34
XPA-202ENST00000462523 A0A1B0GUH1 482 aa17.17■□□□□ 0.34
XPA-202ENST00000462523 RAMP1O60894 148 aa17.17■□□□□ 0.34
XPA-202ENST00000462523 AHSA1O95433 338 aa17.17■□□□□ 0.34
XPA-202ENST00000462523 BGLAPP02818 100 aa17.17■□□□□ 0.34
XPA-202ENST00000462523 RRM2P31350 389 aa17.17■□□□□ 0.34
XPA-202ENST00000462523 AGFG1P52594 562 aaKnown RBP17.17■□□□□ 0.34
XPA-202ENST00000462523 OR2B6P58173 313 aa17.17■□□□□ 0.34
XPA-202ENST00000462523 ACTR3P61158 418 aa17.17■□□□□ 0.34
XPA-202ENST00000462523 CSNK2A1P68400 391 aaPredicted RBP17.17■□□□□ 0.34
XPA-202ENST00000462523 ADORA2A-AS1P86434 159 aa17.17■□□□□ 0.34
XPA-202ENST00000462523 SEC23BQ15437 767 aa17.17■□□□□ 0.34
XPA-202ENST00000462523 FAM69AQ5T7M9 428 aa17.17■□□□□ 0.34
XPA-202ENST00000462523 C5orf46Q6UWT4 87 aa17.17■□□□□ 0.34
XPA-202ENST00000462523 OR52J3Q8NH60 311 aa17.17■□□□□ 0.34
XPA-202ENST00000462523 MFSD8Q8NHS3 518 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms