RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 OR8K3Q8NH51 312 aa12.91□□□□□ -0.34
ERCC3-205ENST00000460485 DOK4Q8TEW6 326 aa12.91□□□□□ -0.34
ERCC3-205ENST00000460485 SECISBP2Q96T21 854 aaKnown RBP12.91□□□□□ -0.34
ERCC3-205ENST00000460485 WWTR1Q9GZV5 400 aa12.91□□□□□ -0.34
ERCC3-205ENST00000460485 DHCR7Q9UBM7 475 aaKnown RBP12.91□□□□□ -0.34
ERCC3-205ENST00000460485 C19orf25Q9UFG5 118 aaPredicted RBP12.91□□□□□ -0.34
ERCC3-205ENST00000460485 CHRNA9Q9UGM1 479 aa12.91□□□□□ -0.34
ERCC3-205ENST00000460485 NXT1Q9UKK6 140 aaKnown RBP12.91□□□□□ -0.34
ERCC3-205ENST00000460485 RARRES3Q9UL19 164 aa12.91□□□□□ -0.34
ERCC3-205ENST00000460485 RAXQ9Y2V3 346 aa12.91□□□□□ -0.34
ERCC3-205ENST00000460485 MPDZO75970 2070 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 ADAMTS9Q9P2N4 1935 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 A0A087WV48 116 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 OR6C70A6NIJ9 312 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 TSPAN2O60636 221 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 MT-ND5P03915 603 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 OCM2P0CE71 109 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 OCMP0CE72 109 aaPredicted RBP12.9□□□□□ -0.34
ERCC3-205ENST00000460485 NAGAP17050 411 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 SLC2A5P22732 501 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 HTR3AP46098 478 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 SUMO3P55854 103 aaPredicted RBP12.9□□□□□ -0.34
ERCC3-205ENST00000460485 ITGADQ13349 1161 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 GALEQ14376 348 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 TRIM16LQ309B1 348 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 SNAP47Q5SQN1 464 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 ZNF322Q6U7Q0 402 aaPredicted RBP12.9□□□□□ -0.34
ERCC3-205ENST00000460485 DCDC5Q6ZRR9 648 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 ATG4DQ86TL0 474 aaPredicted RBP12.9□□□□□ -0.34
ERCC3-205ENST00000460485 GATAD2AQ86YP4 633 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 SLC37A3Q8NCC5 494 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 LSM14AQ8ND56 463 aaKnown RBP12.9□□□□□ -0.34
ERCC3-205ENST00000460485 OR4C3Q8NH37 302 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 NUBPLQ8TB37 319 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 PHOSPHO1Q8TCT1 267 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 TSLPQ969D9 159 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 SLC25A46Q96AG3 418 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 EFHD2Q96C19 240 aaPredicted RBP12.9□□□□□ -0.34
ERCC3-205ENST00000460485 CEP19Q96LK0 163 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 NUDT22Q9BRQ3 303 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 SEMA4CQ9C0C4 833 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 VN1R1Q9GZP7 353 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 SLC26A1Q9H2B4 701 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 OCEL1Q9H607 264 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 SP140LQ9H930 580 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 MCCC2Q9HCC0 563 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 SMURF1Q9HCE7 757 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 TXNL4BQ9NX01 149 aaKnown RBP12.9□□□□□ -0.34
ERCC3-205ENST00000460485 HIF3AQ9Y2N7 669 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 CORINQ9Y5Q5 1042 aa12.9□□□□□ -0.34
ERCC3-205ENST00000460485 ARPC4-TTLL3A0A0A6YYG9 625 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 A0A1B0GVG6 124 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 SLC35F4A4IF30 521 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 J3QRK9 145 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 PFDN1O60925 122 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 UPK1BO75841 260 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 MT-ATP6P00846 226 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 CD1AP06126 327 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 SYPP08247 313 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 F8A1P23610 371 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 CENPAP49450 140 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 DEFA1P59665 94 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 DEFA3P59666 94 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 MRPL28Q13084 256 aaKnown RBP12.89□□□□□ -0.35
ERCC3-205ENST00000460485 GPR139Q6DWJ6 353 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 PAMR1Q6UXH9 720 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 THSD4Q6ZMP0 1018 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 GLRX5Q86SX6 157 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 CCDC190Q86UF4 302 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 MEX3DQ86XN8 651 aaKnown RBP12.89□□□□□ -0.35
ERCC3-205ENST00000460485 SYS1Q8N2H4 156 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 OR6S1Q8NH40 331 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 METTL21AQ8WXB1 218 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 SNX18Q96RF0 628 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 GAL3ST4Q96RP7 486 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 MNTQ99583 582 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 TEAD3Q99594 435 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 NUDT9Q9BW91 350 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 TBL1XR1Q9BZK7 514 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 LRRN3Q9H3W5 708 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 FKRPQ9H9S5 495 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 ETAA1Q9NY74 926 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 ZNF229Q9UJW7 825 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 MKL2Q9ULH7 1088 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 TRAPPC4Q9Y296 219 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 SF3B6Q9Y3B4 125 aaKnown RBP12.89□□□□□ -0.35
ERCC3-205ENST00000460485 PTPRBP23467 1997 aa12.89□□□□□ -0.35
ERCC3-205ENST00000460485 TRAV27A0A087WT01 109 aa12.88□□□□□ -0.35
ERCC3-205ENST00000460485 DAPL1A0PJW8 107 aa12.88□□□□□ -0.35
ERCC3-205ENST00000460485 CCDC182A6NF36 153 aa12.88□□□□□ -0.35
ERCC3-205ENST00000460485 C12orf71A8MTZ7 269 aa12.88□□□□□ -0.35
ERCC3-205ENST00000460485 SOCS6O14544 535 aa12.88□□□□□ -0.35
ERCC3-205ENST00000460485 REM1O75628 298 aa12.88□□□□□ -0.35
ERCC3-205ENST00000460485 PPP1R3DO95685 299 aa12.88□□□□□ -0.35
ERCC3-205ENST00000460485 CFIP05156 583 aa12.88□□□□□ -0.35
ERCC3-205ENST00000460485 SBK2P0C263 348 aa12.88□□□□□ -0.35
ERCC3-205ENST00000460485 FTH1P19P0C7X4 201 aa12.88□□□□□ -0.35
ERCC3-205ENST00000460485 FUT1P19526 365 aa12.88□□□□□ -0.35
ERCC3-205ENST00000460485 PTBP1P26599 531 aaKnown RBP eCLIP12.88□□□□□ -0.35
ERCC3-205ENST00000460485 TMED10P49755 219 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms