RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 IGHV3-15A0A0B4J1V0 119 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 OR6C65A6NJZ3 312 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 M0R1B8 84 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 GTPBP1O00178 669 aaKnown RBP4.94□□□□□ -1.62
VPS8-214ENST00000458721 SCAMP2O15127 329 aaKnown RBP4.94□□□□□ -1.62
VPS8-214ENST00000458721 GLRA3O75311 464 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 LYPLA1O75608 230 aaPredicted RBP4.94□□□□□ -1.62
VPS8-214ENST00000458721 H6PDO95479 791 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 AGR2O95994 175 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 TGFAP01135 160 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 CRYAAP02489 173 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 OPN1LWP04000 364 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 ITGA5P08648 1049 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 MYL2P10916 166 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 CFPP27918 469 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 MPGP29372 298 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 MAGEA8P43361 318 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 HTR3AP46098 478 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 ZNF83P51522 516 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 CCR4P51679 360 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 PRKAG1P54619 331 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 DVL1P1P54792 670 aaPredicted RBP4.94□□□□□ -1.62
VPS8-214ENST00000458721 SH3BGRP55822 239 aaPredicted RBP4.94□□□□□ -1.62
VPS8-214ENST00000458721 PRPS1P60891 318 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 MRPS25P82663 173 aaKnown RBP4.94□□□□□ -1.62
VPS8-214ENST00000458721 H3F3AP84243 136 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 TAGLNQ01995 201 aaKnown RBP4.94□□□□□ -1.62
VPS8-214ENST00000458721 TP53BP2Q13625 1128 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 ZNF141Q15928 474 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 ZSWIM7Q19AV6 140 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 PRSS53Q2L4Q9 553 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 CR1LQ2VPA4 569 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 LSM12Q3MHD2 195 aaKnown RBP4.94□□□□□ -1.62
VPS8-214ENST00000458721 CCDC153Q494R4 210 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 TIGD2Q4W5G0 525 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 CFAP157Q5JU67 520 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 TEX35Q5T0J7 233 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.94□□□□□ -1.62
VPS8-214ENST00000458721 ZYG11AQ6WRX3 759 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 USP43Q70EL4 1123 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 EIF3MQ7L2H7 374 aaKnown RBP4.94□□□□□ -1.62
VPS8-214ENST00000458721 SLC46A3Q7Z3Q1 461 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 GRINAQ7Z429 371 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 FAM169BQ8N8A8 192 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 LINC01356Q8N9X3 169 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 POMGNT2Q8NAT1 580 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 NUP37Q8NFH4 326 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 OR52N5Q8NH56 324 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 FBXO30Q8TB52 745 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 ADAMTS15Q8TE58 950 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 CDS1Q92903 461 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 CIDECQ96AQ7 238 aaPredicted RBP4.94□□□□□ -1.62
VPS8-214ENST00000458721 TMEM45BQ96B21 275 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 C1orf159Q96HA4 380 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 EGLN2Q96KS0 407 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 SORCS2Q96PQ0 1159 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 KCNS3Q9BQ31 491 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 CCDC106Q9BWC9 280 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 RAB1BQ9H0U4 201 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 ZNF442Q9H7R0 627 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 PPCSQ9HAB8 311 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 EXOSC3Q9NQT5 275 aaKnown RBP4.94□□□□□ -1.62
VPS8-214ENST00000458721 SLC17A5Q9NRA2 495 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 POLE3Q9NRF9 147 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 CA10Q9NS85 328 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 SIRT3Q9NTG7 399 aaPredicted RBP4.94□□□□□ -1.62
VPS8-214ENST00000458721 ACER3Q9NUN7 267 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 TMEM216Q9P0N5 145 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 SH3BP4Q9P0V3 963 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 CHRNA9Q9UGM1 479 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 DCDC2Q9UHG0 476 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 ATP6V1HQ9UI12 483 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 MID2Q9UJV3 735 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 PCDHGB4Q9UN71 923 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 TRAPPC4Q9Y296 219 aa4.94□□□□□ -1.62
VPS8-214ENST00000458721 ARPC4-TTLL3A0A0A6YYG9 625 aa4.93□□□□□ -1.62
VPS8-214ENST00000458721 IGHV4-61A0A0C4DH41 118 aa4.93□□□□□ -1.62
VPS8-214ENST00000458721 SERINC4A6NH21 518 aa4.93□□□□□ -1.62
VPS8-214ENST00000458721 FAM157AC9JC47 383 aa4.93□□□□□ -1.62
VPS8-214ENST00000458721 ATP6V1G2-DDX39BF2Z307 99 aa4.93□□□□□ -1.62
VPS8-214ENST00000458721 POC1B-GALNT4F8VUJ3 575 aa4.93□□□□□ -1.62
VPS8-214ENST00000458721 G3V2L1 256 aa4.93□□□□□ -1.62
VPS8-214ENST00000458721 FAAHO00519 579 aa4.93□□□□□ -1.62
VPS8-214ENST00000458721 LSM1O15116 133 aaKnown RBP4.93□□□□□ -1.62
VPS8-214ENST00000458721 ZNF208O43345 1280 aa4.93□□□□□ -1.62
VPS8-214ENST00000458721 STX11O75558 287 aa4.93□□□□□ -1.62
VPS8-214ENST00000458721 CSTAP01040 98 aa4.93□□□□□ -1.62
VPS8-214ENST00000458721 UQCRBP14927 111 aa4.93□□□□□ -1.62
VPS8-214ENST00000458721 ITGA2P17301 1181 aa4.93□□□□□ -1.62
VPS8-214ENST00000458721 EDNRAP25101 427 aa4.93□□□□□ -1.62
VPS8-214ENST00000458721 SERPINF1P36955 418 aa4.93□□□□□ -1.62
VPS8-214ENST00000458721 SRP14P37108 136 aaKnown RBP4.93□□□□□ -1.62
VPS8-214ENST00000458721 SLC1A3P43003 542 aa4.93□□□□□ -1.62
VPS8-214ENST00000458721 LIMS1P48059 325 aa4.93□□□□□ -1.62
VPS8-214ENST00000458721 CCT3P49368 545 aaKnown RBP4.93□□□□□ -1.62
VPS8-214ENST00000458721 IDH3GP51553 393 aaPredicted RBP4.93□□□□□ -1.62
VPS8-214ENST00000458721 CDH15P55291 814 aa4.93□□□□□ -1.62
VPS8-214ENST00000458721 FOXA1P55317 472 aa4.93□□□□□ -1.62
VPS8-214ENST00000458721 SESN3P58005 492 aa4.93□□□□□ -1.62
VPS8-214ENST00000458721 RPL38P63173 70 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms