RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 ALG10BQ5I7T1 473 aa14.38□□□□□ -0.11
CD28-203ENST00000458610 SWT1Q5T5J6 900 aaKnown RBP14.38□□□□□ -0.11
CD28-203ENST00000458610 PAQR6Q6TCH4 344 aa14.38□□□□□ -0.11
CD28-203ENST00000458610 TREML1Q86YW5 311 aa14.38□□□□□ -0.11
CD28-203ENST00000458610 RNF217Q8TC41 542 aa14.38□□□□□ -0.11
CD28-203ENST00000458610 EPYCQ99645 322 aa14.38□□□□□ -0.11
CD28-203ENST00000458610 MCHR1Q99705 422 aa14.38□□□□□ -0.11
CD28-203ENST00000458610 ARHGDIGQ99819 225 aa14.38□□□□□ -0.11
CD28-203ENST00000458610 USB1Q9BQ65 265 aaKnown RBP14.38□□□□□ -0.11
CD28-203ENST00000458610 GPATCH1Q9BRR8 931 aaKnown RBP14.38□□□□□ -0.11
CD28-203ENST00000458610 C12orf49Q9H741 205 aa14.38□□□□□ -0.11
CD28-203ENST00000458610 PARPBPQ9NWS1 579 aa14.38□□□□□ -0.11
CD28-203ENST00000458610 ZNF226Q9NYT6 803 aa14.38□□□□□ -0.11
CD28-203ENST00000458610 GPR52Q9Y2T5 361 aa14.38□□□□□ -0.11
CD28-203ENST00000458610 PKDREJQ9NTG1 2253 aa14.38□□□□□ -0.11
CD28-203ENST00000458610 A0A1B0GWA3 101 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 ZC3H12DA2A288 527 aaKnown RBP14.37□□□□□ -0.11
CD28-203ENST00000458610 SH3D21A4FU49 640 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 LIPT2A6NK58 231 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 GSTA4O15217 222 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 CNOT4O95628 575 aaKnown RBP14.37□□□□□ -0.11
CD28-203ENST00000458610 OPN1SWP03999 348 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 IMPDH2P12268 514 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 GTF2E2P29084 291 aaKnown RBP14.37□□□□□ -0.11
CD28-203ENST00000458610 UGT2B10P36537 528 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 NUDT2P50583 147 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 SLC16A1P53985 500 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 H3F3AP84243 136 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 BNIP2Q12982 314 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 SNTB1Q13884 538 aaKnown RBP14.37□□□□□ -0.11
CD28-203ENST00000458610 P2RY6Q15077 328 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 OR7A5Q15622 319 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 GLIPR1L2Q4G1C9 344 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 GKAP1Q5VSY0 366 aaPredicted RBP14.37□□□□□ -0.11
CD28-203ENST00000458610 TMEM225Q6GV28 225 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 ZNF613Q6PF04 617 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 SLC15A3Q8IY34 581 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 ZNF100Q8IYN0 542 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 MICU2Q8IYU8 434 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 ANKS4BQ8N8V4 417 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 MFSD8Q8NHS3 518 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 LINC01560Q8TB33 94 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 LZICQ8WZA0 190 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 SLC38A4Q969I6 547 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 TAMM41Q96BW9 452 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 CCT8L2Q96SF2 557 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 SF3B5Q9BWJ5 86 aaKnown RBP14.37□□□□□ -0.11
CD28-203ENST00000458610 KLHL4Q9C0H6 718 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 OR10A4Q9H209 315 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 EDARQ9UNE0 448 aa14.37□□□□□ -0.11
CD28-203ENST00000458610 NOSIPQ9Y314 301 aaKnown RBP14.37□□□□□ -0.11
CD28-203ENST00000458610 CCT8L1PA6NM43 557 aa14.36□□□□□ -0.11
CD28-203ENST00000458610 CYSRT1A8MQ03 144 aa14.36□□□□□ -0.11
CD28-203ENST00000458610 TMEM229AB2RXF0 380 aa14.36□□□□□ -0.11
CD28-203ENST00000458610 NPIPB7O75200 414 aa14.36□□□□□ -0.11
CD28-203ENST00000458610 MRPL33O75394 65 aaKnown RBP14.36□□□□□ -0.11
CD28-203ENST00000458610 CD247P20963 164 aa14.36□□□□□ -0.11
CD28-203ENST00000458610 HTR2AP28223 471 aa14.36□□□□□ -0.11
CD28-203ENST00000458610 KDELR2P33947 212 aa14.36□□□□□ -0.11
CD28-203ENST00000458610 OR3A2P47893 321 aa14.36□□□□□ -0.11
CD28-203ENST00000458610 MNAT1P51948 309 aa14.36□□□□□ -0.11
CD28-203ENST00000458610 LIPEQ05469 1076 aa14.36□□□□□ -0.11
CD28-203ENST00000458610 MFSD13AQ14CX5 517 aa14.36□□□□□ -0.11
CD28-203ENST00000458610 NRF1Q16656 503 aa14.36□□□□□ -0.11
CD28-203ENST00000458610 OTUD3Q5T2D3 398 aaPredicted RBP14.36□□□□□ -0.11
CD28-203ENST00000458610 FBXW10Q5XX13 1052 aa14.36□□□□□ -0.11
CD28-203ENST00000458610 ABLIM2Q6H8Q1 611 aa14.36□□□□□ -0.11
CD28-203ENST00000458610 NUFIP2Q7Z417 695 aaKnown RBP14.36□□□□□ -0.11
CD28-203ENST00000458610 TMEM200AQ86VY9 491 aa14.36□□□□□ -0.11
CD28-203ENST00000458610 STEAP2Q8NFT2 490 aa14.36□□□□□ -0.11
CD28-203ENST00000458610 GPR32P1Q8NGA4 272 aa14.36□□□□□ -0.11
CD28-203ENST00000458610 MED18Q9BUE0 208 aa14.36□□□□□ -0.11
CD28-203ENST00000458610 RSPO3Q9BXY4 272 aaPredicted RBP14.36□□□□□ -0.11
CD28-203ENST00000458610 ADPRHL2Q9NX46 363 aa14.36□□□□□ -0.11
CD28-203ENST00000458610 CMTM6Q9NX76 183 aa14.36□□□□□ -0.11
CD28-203ENST00000458610 UTP20O75691 2785 aaKnown RBP14.36□□□□□ -0.11
CD28-203ENST00000458610 A0A087WUJ7 227 aa14.35□□□□□ -0.11
CD28-203ENST00000458610 A0A0B4J2E0 115 aa14.35□□□□□ -0.11
CD28-203ENST00000458610 A0A1B0GX12 115 aa14.35□□□□□ -0.11
CD28-203ENST00000458610 A6NNC1 897 aa14.35□□□□□ -0.11
CD28-203ENST00000458610 ZNF716A6NP11 495 aa14.35□□□□□ -0.11
CD28-203ENST00000458610 M0R3H8 397 aa14.35□□□□□ -0.11
CD28-203ENST00000458610 GMNNO75496 209 aa14.35□□□□□ -0.11
CD28-203ENST00000458610 IFNA8P32881 189 aa14.35□□□□□ -0.11
CD28-203ENST00000458610 SLC7A2P52569 658 aa14.35□□□□□ -0.11
CD28-203ENST00000458610 PSME3P61289 254 aa14.35□□□□□ -0.11
CD28-203ENST00000458610 FAM69AQ5T7M9 428 aa14.35□□□□□ -0.11
CD28-203ENST00000458610 TFAP2EQ6VUC0 442 aa14.35□□□□□ -0.11
CD28-203ENST00000458610 COMTD1Q86VU5 262 aa14.35□□□□□ -0.11
CD28-203ENST00000458610 CCDC103Q8IW40 242 aa14.35□□□□□ -0.11
CD28-203ENST00000458610 OR6S1Q8NH40 331 aa14.35□□□□□ -0.11
CD28-203ENST00000458610 APH1AQ96BI3 265 aa14.35□□□□□ -0.11
CD28-203ENST00000458610 SLC25A36Q96CQ1 311 aa14.35□□□□□ -0.11
CD28-203ENST00000458610 DNAJA3Q96EY1 480 aa14.35□□□□□ -0.11
CD28-203ENST00000458610 ZNF300Q96RE9 604 aaPredicted RBP14.35□□□□□ -0.11
CD28-203ENST00000458610 POLR2J2Q9GZM3 115 aaKnown RBP14.35□□□□□ -0.11
CD28-203ENST00000458610 POLR2J3Q9H1A7 115 aaKnown RBP14.35□□□□□ -0.11
CD28-203ENST00000458610 NDE1Q9NXR1 346 aa14.35□□□□□ -0.11
CD28-203ENST00000458610 TAGLN3Q9UI15 199 aa14.35□□□□□ -0.11
CD28-203ENST00000458610 ING1Q9UK53 422 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms