RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 SRA1Q9HD15 236 aaKnown RBP12.48□□□□□ -0.41
CLK3-203ENST00000454830 PALMDQ9NP74 551 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 BAIAP2Q9UQB8 552 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 CPNE3O75131 537 aaKnown RBP12.48□□□□□ -0.41
CLK3-203ENST00000454830 ALOX12BO75342 701 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 PPP5CP53041 499 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 GAS1P54826 345 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 FABP5Q01469 135 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 SKP2Q13309 424 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 TP53I3Q53FA7 332 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 FGF11Q92914 225 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 C4orf36Q96KX1 117 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 COMMD3Q9UBI1 195 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 MED12Q93074 2177 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 HLA-DPB1P04440 258 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 ALG10Q5BKT4 473 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 RPTNQ6XPR3 784 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 GDPGP1Q6ZNW5 385 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 RABEPKQ7Z6M1 372 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 WDR5BQ86VZ2 330 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 MR1Q95460 341 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 ABCB9Q9NP78 766 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 TRIM36Q9NQ86 728 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 RPRD1BQ9NQG5 326 aaKnown RBP12.48□□□□□ -0.41
CLK3-203ENST00000454830 C14orf119Q9NWQ9 140 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 SDK2Q58EX2 2172 aa12.48□□□□□ -0.41
CLK3-203ENST00000454830 CD40LGP29965 261 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 RNF4P78317 190 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 YOD1Q5VVQ6 348 aaPredicted RBP12.47□□□□□ -0.41
CLK3-203ENST00000454830 SLC22A16Q86VW1 577 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 PARP16Q8N5Y8 322 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 OR4D9Q8NGE8 314 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 NEIL3Q8TAT5 605 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 KTI12Q96EK9 354 aaPredicted RBP12.47□□□□□ -0.41
CLK3-203ENST00000454830 TSSK2Q96PF2 358 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 AKIRIN1Q9H9L7 192 aaPredicted RBP12.47□□□□□ -0.41
CLK3-203ENST00000454830 GPN3Q9UHW5 284 aaPredicted RBP12.47□□□□□ -0.41
CLK3-203ENST00000454830 FER1L5A0AVI2 2057 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 WDFY4Q6ZS81 3184 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 CCDC163A0A0D9SF12 145 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 A0A1W2PPK0 400 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 NCR1O76036 304 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 OR6A2O95222 327 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 MT-ND5P03915 603 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 SBK2P0C263 348 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 PGCP20142 388 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 FBXW4P57775 412 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 OR12D2P58182 307 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 TCEAL6Q6IPX3 200 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 TCEAL3Q969E4 200 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 MRPS18AQ9NVS2 196 aaKnown RBP12.47□□□□□ -0.41
CLK3-203ENST00000454830 ASB6Q9NWX5 421 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 KLRF1Q9NZS2 232 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 MALT1Q9UDY8 824 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 VDAC3Q9Y277 283 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 ADAMTS9Q9P2N4 1935 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 SIGLEC14Q08ET2 396 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 LYPD4Q6UWN0 246 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 COX15Q7KZN9 410 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 FAM83FQ8NEG4 500 aaPredicted RBP12.47□□□□□ -0.41
CLK3-203ENST00000454830 BABAM2Q9NXR7 383 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 GRIP1Q9Y3R0 1128 aa12.47□□□□□ -0.41
CLK3-203ENST00000454830 C19orf67A6NJJ6 358 aa12.46□□□□□ -0.41
CLK3-203ENST00000454830 C4orf47A7E2U8 309 aa12.46□□□□□ -0.41
CLK3-203ENST00000454830 GABRA5P31644 462 aa12.46□□□□□ -0.41
CLK3-203ENST00000454830 TPBGQ13641 420 aa12.46□□□□□ -0.41
CLK3-203ENST00000454830 C1QL3Q5VWW1 255 aa12.46□□□□□ -0.41
CLK3-203ENST00000454830 LAX1Q8IWV1 398 aa12.46□□□□□ -0.41
CLK3-203ENST00000454830 DIRAS2Q96HU8 199 aa12.46□□□□□ -0.41
CLK3-203ENST00000454830 SLC30A2Q9BRI3 323 aa12.46□□□□□ -0.41
CLK3-203ENST00000454830 GRHPRQ9UBQ7 328 aa12.46□□□□□ -0.41
CLK3-203ENST00000454830 GNG8Q9UK08 70 aa12.46□□□□□ -0.41
CLK3-203ENST00000454830 NPFFR2Q9Y5X5 522 aa12.46□□□□□ -0.41
CLK3-203ENST00000454830 A0A1W2PRG6 482 aa12.46□□□□□ -0.41
CLK3-203ENST00000454830 CER1O95813 267 aa12.46□□□□□ -0.41
CLK3-203ENST00000454830 HLA-DQA2P01906 255 aa12.46□□□□□ -0.41
CLK3-203ENST00000454830 TNFSF8P32971 234 aa12.46□□□□□ -0.41
CLK3-203ENST00000454830 IFITM3Q01628 133 aa12.46□□□□□ -0.41
CLK3-203ENST00000454830 Q6ZNX1 250 aa12.46□□□□□ -0.41
CLK3-203ENST00000454830 PLEKHG7Q6ZR37 379 aa12.46□□□□□ -0.41
CLK3-203ENST00000454830 ZSCAN1Q8NBB4 408 aa12.46□□□□□ -0.41
CLK3-203ENST00000454830 LSM14AQ8ND56 463 aaKnown RBP12.46□□□□□ -0.41
CLK3-203ENST00000454830 ZNF426Q9BUY5 554 aa12.46□□□□□ -0.41
CLK3-203ENST00000454830 QPCTLQ9NXS2 382 aa12.46□□□□□ -0.41
CLK3-203ENST00000454830 ZNF346Q9UL40 294 aaKnown RBP12.46□□□□□ -0.41
CLK3-203ENST00000454830 EXOGQ9Y2C4 368 aaKnown RBP12.46□□□□□ -0.41
CLK3-203ENST00000454830 A0A1W2PQL4 384 aaPredicted RBP12.46□□□□□ -0.42
CLK3-203ENST00000454830 MEN1O00255 615 aa12.46□□□□□ -0.42
CLK3-203ENST00000454830 GABRPO00591 440 aa12.46□□□□□ -0.42
CLK3-203ENST00000454830 EVI2BP34910 448 aa12.46□□□□□ -0.42
CLK3-203ENST00000454830 PRPS1P60891 318 aa12.46□□□□□ -0.42
CLK3-203ENST00000454830 FAM131AQ6UXB0 335 aa12.46□□□□□ -0.42
CLK3-203ENST00000454830 ANKRD37Q7Z713 158 aa12.46□□□□□ -0.42
CLK3-203ENST00000454830 ATG4DQ86TL0 474 aaPredicted RBP12.46□□□□□ -0.42
CLK3-203ENST00000454830 OR5W2Q8NH69 310 aa12.46□□□□□ -0.42
CLK3-203ENST00000454830 BARHL1Q9BZE3 327 aa12.46□□□□□ -0.42
CLK3-203ENST00000454830 KLK3P07288 261 aaPredicted RBP12.45□□□□□ -0.42
CLK3-203ENST00000454830 TFPIP10646 304 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 SLC6A8P48029 635 aa12.45□□□□□ -0.42
CLK3-203ENST00000454830 QPRTQ15274 297 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms