RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 FNDC7Q5VTL7 733 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 CADM2Q8N3J6 435 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 CISD2Q8N5K1 135 aaKnown RBP8.98□□□□□ -0.97
CCDC171-203ENST00000449575 GATSQ8NAP1 163 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 OR5K1Q8NHB7 308 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 TSPAN10Q9H1Z9 355 aaPredicted RBP8.98□□□□□ -0.97
CCDC171-203ENST00000449575 C12orf4Q9NQ89 552 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 ZNHIT1O43257 154 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 AIREO43918 545 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 UGT2B17O75795 530 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 UTS2O95399 124 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 CST1P01037 141 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 RFPL3SP0C7P2 107 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 CD46P15529 392 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 GPX2P18283 190 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 ERP29P30040 261 aaKnown RBP8.98□□□□□ -0.97
CCDC171-203ENST00000449575 SLC15A1P46059 708 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 KHKP50053 298 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 UGT2B15P54855 530 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 GPR50Q13585 617 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 DGCR6Q14129 220 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 GPR68Q15743 365 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 MAPK14Q16539 360 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 ARHGAP11BQ3KRB8 267 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 ESCO2Q56NI9 601 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 PLCZ1Q86YW0 608 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 OR5H6Q8NGV6 325 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 SLC38A5Q8WUX1 472 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 SGCZQ96LD1 299 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 C5orf34Q96MH7 638 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 CITED4Q96RK1 184 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 THUMPD3Q9BV44 507 aaKnown RBP8.98□□□□□ -0.97
CCDC171-203ENST00000449575 SMURF2Q9HAU4 748 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 ACOT13Q9NPJ3 140 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 V9GYQ6 96 aa8.98□□□□□ -0.97
CCDC171-203ENST00000449575 MPDZO75970 2070 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 C12orf71A8MTZ7 269 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 GMFGO60234 142 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 HS6ST1O60243 411 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 FADS1O60427 444 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 NOS1APO75052 506 aaPredicted RBP8.97□□□□□ -0.97
CCDC171-203ENST00000449575 BCHEP06276 602 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 SFTPCP11686 197 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 NAGAP17050 411 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 IL32P24001 234 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 EVI2BP34910 448 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 KRT20P35900 424 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 MAP2K4P45985 399 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 MEOX1P50221 254 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 DSTNP60981 165 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 CSNK2BP67870 215 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 FOXO1Q12778 655 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.97□□□□□ -0.97
CCDC171-203ENST00000449575 GPAT3Q53EU6 434 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 TYW3Q6IPR3 259 aaKnown RBP8.97□□□□□ -0.97
CCDC171-203ENST00000449575 FRRS1Q6ZNA5 592 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 NUP54Q7Z3B4 507 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 C16orf62Q7Z3J2 963 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 MARCH3Q86UD3 253 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 PTOV1Q86YD1 416 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 HIPK1Q86Z02 1210 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 LILRB2Q8N423 598 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 POGLUT1Q8NBL1 392 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 OR2M7Q8NG81 312 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 OR10A6Q8NH74 314 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 NTNG2Q96CW9 530 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 SNRNP40Q96DI7 357 aaKnown RBP8.97□□□□□ -0.97
CCDC171-203ENST00000449575 MAP6Q96JE9 813 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 SLC38A1Q9H2H9 487 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 TRAPPC4Q9Y296 219 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 LYVE1Q9Y5Y7 322 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 TMEM238LA0A1B0GVL6 79 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 LRRC3CA6NJW4 275 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 DUXAA6NLW8 204 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 P04436 131 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 SOX6P35712 828 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 GZMMP51124 257 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 GAS1P54826 345 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 KEAP1Q14145 624 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 CD226Q15762 336 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 NDUFAF6Q330K2 333 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 LIX1LQ8IVB5 337 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 GPALPP1Q8IXQ4 340 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 ZNF843Q8N446 348 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 RNF138Q8WVD3 245 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 TMEM19Q96HH6 336 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 RNF170Q96K19 258 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 JSRP1Q96MG2 331 aaPredicted RBP8.97□□□□□ -0.97
CCDC171-203ENST00000449575 FRMD6Q96NE9 622 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 GNRHR2Q96P88 292 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 DOHHQ9BU89 302 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 ZNF350Q9GZX5 532 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 METTL7AQ9H8H3 244 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 KLRF1Q9NZS2 232 aa8.97□□□□□ -0.97
CCDC171-203ENST00000449575 ZMAT5Q9UDW3 170 aaKnown RBP8.97□□□□□ -0.97
CCDC171-203ENST00000449575 PRAMEF25A6NGN4 478 aa8.96□□□□□ -0.97
CCDC171-203ENST00000449575 NPIPB9F8W1W9 429 aa8.96□□□□□ -0.97
CCDC171-203ENST00000449575 TP53I11O14683 189 aa8.96□□□□□ -0.97
CCDC171-203ENST00000449575 GNB5O14775 395 aa8.96□□□□□ -0.97
CCDC171-203ENST00000449575 OIP5O43482 229 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms