RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 LTBQ06643 244 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 ZNF616Q08AN1 781 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 C19orf57Q0VDD7 668 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 TNK1Q13470 666 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 ERV3-1Q14264 604 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 TRMT12Q53H54 448 aaKnown RBP11.49□□□□□ -0.57
UBE3B-204ENST00000449510 OR10K2Q6IF99 312 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 ANKRD53Q8N9V6 530 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 S100A13Q99584 98 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 ADAT1Q9BUB4 502 aaKnown RBP11.49□□□□□ -0.57
UBE3B-204ENST00000449510 GRHPRQ9UBQ7 328 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 SLC23A2Q9UGH3 650 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 LY75O60449 1722 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 SLC33A1O00400 549 aaPredicted RBP11.49□□□□□ -0.57
UBE3B-204ENST00000449510 HLA-AP01891 365 aaKnown RBP11.49□□□□□ -0.57
UBE3B-204ENST00000449510 ANKRD34CP0C6C1 535 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 SRMP19623 302 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 CDK2P24941 298 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 ACTC1P68032 377 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 ACTA1P68133 377 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 PRSS53Q2L4Q9 553 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 SLC25A24Q6NUK1 477 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 OR52N1Q8NH53 320 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 CWH43Q9H720 699 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 C20orf141Q9NUB4 165 aa11.49□□□□□ -0.57
UBE3B-204ENST00000449510 XIRP1Q702N8 1843 aaKnown RBP11.49□□□□□ -0.57
UBE3B-204ENST00000449510 A0A1B0GTH9 108 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 SLC5A10A0PJK1 596 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 SURF4O15260 269 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 ADH5P11766 374 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 TBXA2RP21731 343 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 GSG1Q2KHT4 349 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 CLLU1Q5K131 121 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 ZNF620Q6ZNG0 422 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 C12orf45Q8N5I9 185 aaPredicted RBP11.48□□□□□ -0.57
UBE3B-204ENST00000449510 PXT1Q8NFP0 134 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 DCUN1D4Q92564 292 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 RASD2Q96D21 266 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 POTEKPQ9BYX7 375 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 MAN2C1Q9NTJ4 1040 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 ZNF346Q9UL40 294 aaKnown RBP11.48□□□□□ -0.57
UBE3B-204ENST00000449510 CAMK2AQ9UQM7 478 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 ZNF443Q9Y2A4 671 aaPredicted RBP11.48□□□□□ -0.57
UBE3B-204ENST00000449510 GREB1LQ9C091 1923 aaPredicted RBP11.48□□□□□ -0.57
UBE3B-204ENST00000449510 PYCARD-AS1I3L0S3 204 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 CASC3O15234 703 aaKnown RBP11.48□□□□□ -0.57
UBE3B-204ENST00000449510 INHAP05111 366 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 ZDHHC11BP0C7U3 371 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 CYBAP13498 195 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 PPP3CBP16298 524 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 UGT2B7P16662 529 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 UBE2IP63279 158 aaKnown RBP11.48□□□□□ -0.57
UBE3B-204ENST00000449510 SPOCK1Q08629 439 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 USF2Q15853 346 aaPredicted RBP11.48□□□□□ -0.57
UBE3B-204ENST00000449510 ZNF584Q8IVC4 421 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 PLPP7Q8NBV4 271 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 STEAP2Q8NFT2 490 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 ELF4Q99607 663 aaPredicted RBP11.48□□□□□ -0.57
UBE3B-204ENST00000449510 C20orf24Q9BUV8 137 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 RPS10P5Q9NQ39 176 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 POMT2Q9UKY4 750 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 MYOFQ9NZM1 2061 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 OR2W5A6NFC9 320 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 SSX5O60225 188 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 CTSEP14091 401 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 RAB28P51157 221 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 RNASE10Q5GAN6 216 aaKnown RBP11.48□□□□□ -0.57
UBE3B-204ENST00000449510 TMEM91Q6ZNR0 172 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 MBOAT2Q6ZWT7 520 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 DPY19L4Q7Z388 723 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 PEG10Q86TG7 708 aaKnown RBP11.48□□□□□ -0.57
UBE3B-204ENST00000449510 LRRTM1Q86UE6 522 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 ACBD4Q8NC06 268 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 TTLQ8NG68 377 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 CNRIP1Q96F85 164 aaPredicted RBP11.48□□□□□ -0.57
UBE3B-204ENST00000449510 MS4A3Q96HJ5 214 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 RBP7Q96R05 134 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 NIT2Q9NQR4 276 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 PRMT8Q9NR22 394 aaPredicted RBP11.48□□□□□ -0.57
UBE3B-204ENST00000449510 NTMQ9P121 344 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 ABRACLQ9P1F3 81 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 CBLCQ9ULV8 474 aa11.48□□□□□ -0.57
UBE3B-204ENST00000449510 SGK494L7N484 410 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 ZNF254O75437 659 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 RHOP08100 348 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 RBM34P42696 430 aaKnown RBP11.47□□□□□ -0.57
UBE3B-204ENST00000449510 CBFBQ13951 182 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 TPRA1Q86W33 373 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 OVCA2Q8WZ82 227 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 SEC61A2Q9H9S3 476 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 KLHL42Q9P2K6 505 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 PRAF2O60831 178 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 ADAMTS4O75173 837 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 MPC2O95563 127 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 IGF2P01344 180 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 SNRNP70P08621 437 aaKnown RBP11.47□□□□□ -0.57
UBE3B-204ENST00000449510 RRASP10301 218 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 EPXP11678 715 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 ADRB3P13945 408 aa11.47□□□□□ -0.57
UBE3B-204ENST00000449510 FGF9P31371 208 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms