RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 CLEC4AQ9UMR7 237 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 TNFSF18Q9UNG2 199 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 CKAP5Q14008 2032 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 TRAV14DV4A0A0A6YYC5 116 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 PYCARD-AS1I3L0S3 204 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 AP4M1O00189 453 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 CCR2P41597 374 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 RBP2P50120 134 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 CD81P60033 236 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 LMAN2Q12907 356 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 PIN1Q13526 163 aaPredicted RBP17.73■□□□□ 0.43
HMGA1-205ENST00000447654 CSRP2Q16527 193 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 ACSM3Q53FZ2 586 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 ZDHHC20Q5W0Z9 365 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 GLT8D1Q68CQ7 371 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 LPCAT3Q6P1A2 487 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 ARL9Q6T311 187 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 TECPR1Q7Z6L1 1165 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 OR4D11Q8NGI4 311 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 ZNF671Q8TAW3 534 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 NEURL3Q96EH8 262 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 TMEM19Q96HH6 336 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 FCRL4Q96PJ5 515 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 ZBP1Q9H171 429 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 ASB8Q9H765 288 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 TMEM185BQ9H7F4 350 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 ICKQ9UPZ9 632 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 CCL26Q9Y258 94 aa17.73■□□□□ 0.43
HMGA1-205ENST00000447654 POM121BA6NF01 834 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 OR8U8P0C7N1 319 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 CD22P20273 847 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 PRR5P85299 388 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 PTSQ03393 145 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 C2orf68Q2NKX9 166 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 DCAF12L2Q5VW00 463 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 TMEM71Q6P5X7 295 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 FAM151BQ6UXP7 276 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 TMEM200AQ86VY9 491 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 RBM45Q8IUH3 476 aaKnown RBP17.72■□□□□ 0.43
HMGA1-205ENST00000447654 TNFAIP8L1Q8WVP5 186 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 ASB11Q8WXH4 323 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 HIST1H2BAQ96A08 127 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 TAAR9Q96RI9 348 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 MYNNQ9NPC7 610 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 BCHEP06276 602 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 RAB40ALP0C0E4 278 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 SLC2A1P11166 492 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 PPT1P50897 306 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 CHAF1BQ13112 559 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 NAE1Q13564 534 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 CDKN3Q16667 212 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 FAM180BQ6P0A1 224 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 DNM1P46Q6ZS02 220 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 GJD3Q8N144 294 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 CLDN19Q8N6F1 224 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 OR52B4Q8NGK2 314 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 RAB40AQ8WXH6 277 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 TIMP4Q99727 224 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 TOLLIPQ9H0E2 274 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 OR51I1Q9H343 314 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 CCDC86Q9H6F5 360 aaKnown RBP17.72■□□□□ 0.43
HMGA1-205ENST00000447654 HCFC1R1Q9NWW0 138 aa17.72■□□□□ 0.43
HMGA1-205ENST00000447654 RNF222A6NCQ9 220 aa17.71■□□□□ 0.43
HMGA1-205ENST00000447654 ACTL6AO96019 429 aa17.71■□□□□ 0.43
HMGA1-205ENST00000447654 SOAT1P35610 550 aa17.71■□□□□ 0.43
HMGA1-205ENST00000447654 NKPD1Q17RQ9 610 aa17.71■□□□□ 0.43
HMGA1-205ENST00000447654 RPS26P11Q5JNZ5 115 aaPredicted RBP17.71■□□□□ 0.43
HMGA1-205ENST00000447654 C11orf88Q6PI97 169 aa17.71■□□□□ 0.43
HMGA1-205ENST00000447654 ACOT7LQ6ZUV0 252 aa17.71■□□□□ 0.43
HMGA1-205ENST00000447654 ESPNLQ6ZVH7 1005 aa17.71■□□□□ 0.43
HMGA1-205ENST00000447654 ANGPTL5Q86XS5 388 aa17.71■□□□□ 0.43
HMGA1-205ENST00000447654 SIRT6Q8N6T7 355 aa17.71■□□□□ 0.43
HMGA1-205ENST00000447654 OR5AK3PQ8NH89 298 aa17.71■□□□□ 0.43
HMGA1-205ENST00000447654 LGALS14Q8TCE9 139 aa17.71■□□□□ 0.43
HMGA1-205ENST00000447654 PHYHIPQ92561 330 aa17.71■□□□□ 0.43
HMGA1-205ENST00000447654 MALSU1Q96EH3 234 aa17.71■□□□□ 0.43
HMGA1-205ENST00000447654 TEAD3Q99594 435 aa17.71■□□□□ 0.43
HMGA1-205ENST00000447654 ZNF471Q9BX82 626 aaPredicted RBP17.71■□□□□ 0.43
HMGA1-205ENST00000447654 SLC46A2Q9BY10 475 aa17.71■□□□□ 0.43
HMGA1-205ENST00000447654 TWSG1Q9GZX9 223 aa17.71■□□□□ 0.43
HMGA1-205ENST00000447654 SEMA4GQ9NTN9 838 aa17.71■□□□□ 0.43
HMGA1-205ENST00000447654 PPIHO43447 177 aaKnown RBP17.7■□□□□ 0.42
HMGA1-205ENST00000447654 CLDN7O95471 211 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 ITGA3P26006 1051 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 PFN3P60673 137 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 RNF4P78317 190 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 MTFR2Q6P444 385 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 LILRA6Q6PI73 481 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 CMTM8Q8IZV2 173 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 MUC20Q8N307 709 aaPredicted RBP17.7■□□□□ 0.42
HMGA1-205ENST00000447654 OR6N1Q8NGY5 312 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 OR5J2Q8NH18 312 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 STOML3Q8TAV4 291 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 PGLYRP3Q96LB9 341 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 LURAP1Q96LR2 239 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 CAMK1GQ96NX5 476 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 ACKR4Q9NPB9 350 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 RCC2Q9P258 522 aaKnown RBP17.7■□□□□ 0.42
HMGA1-205ENST00000447654 ACOD1A6NK06 481 aa17.7■□□□□ 0.42
HMGA1-205ENST00000447654 KIAA0355O15063 1070 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms