RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 SERTAD2Q14140 314 aa15.39■□□□□ 0.05
LAPTM4B-201ENST00000445593 ZNF141Q15928 474 aa15.39■□□□□ 0.05
LAPTM4B-201ENST00000445593 VASNQ6EMK4 673 aa15.39■□□□□ 0.05
LAPTM4B-201ENST00000445593 CLDN22Q8N7P3 220 aa15.39■□□□□ 0.05
LAPTM4B-201ENST00000445593 ZSCAN1Q8NBB4 408 aa15.39■□□□□ 0.05
LAPTM4B-201ENST00000445593 ZNF485Q8NCK3 441 aa15.39■□□□□ 0.05
LAPTM4B-201ENST00000445593 FOXN4Q96NZ1 517 aa15.39■□□□□ 0.05
LAPTM4B-201ENST00000445593 POLE3Q9NRF9 147 aa15.39■□□□□ 0.05
LAPTM4B-201ENST00000445593 WNT16Q9UBV4 365 aa15.39■□□□□ 0.05
LAPTM4B-201ENST00000445593 GMEB2Q9UKD1 530 aa15.39■□□□□ 0.05
LAPTM4B-201ENST00000445593 NPIPB9F8W1W9 429 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 POLR1CO15160 346 aaPredicted RBP15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 ENPP1P22413 925 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 PSPHP78330 225 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 GUSBP11Q6P575 273 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 OGFOD3Q6PK18 319 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 OR5J2Q8NH18 312 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 ZNF285Q96NJ3 590 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 ASB6Q9NWX5 421 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 DYRK3O43781 588 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 PEPDP12955 493 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 IL12BP29460 328 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 RORAP35398 523 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 RPS27P42677 84 aaKnown RBP15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 FHL1Q13642 323 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 GDPGP1Q6ZNW5 385 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 FAM174AQ8TBP5 190 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 CITED4Q96RK1 184 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 PPIL3Q9H2H8 161 aaKnown RBP15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 MIXL1Q9H2W2 232 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 EXOGQ9Y2C4 368 aaKnown RBP15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 K7ESF4 209 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 SELENOFO60613 162 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 HPGDSO60760 199 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 IGHA1P01876 353 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 SBK2P0C263 348 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 GIMD1P0DJR0 217 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 GLB1P16278 677 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 PSMB10P40306 273 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 C1QL3Q5VWW1 255 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 CCBE1Q6UXH8 406 aaPredicted RBP15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 LINC00299Q6ZSB3 139 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 ORAI1Q96D31 301 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 Q96M85 177 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 VN1R1Q9GZP7 353 aa15.38■□□□□ 0.05
LAPTM4B-201ENST00000445593 CCDC182A6NF36 153 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 FABP12A6NFH5 140 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 SAGE2PA6NJ88 616 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 NUDT21O43809 227 aaKnown RBP15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 CDC40O60508 579 aaKnown RBP eCLIP15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 NDUFB2O95178 105 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 TIAF1O95411 115 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 CTBP2P56545 445 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 ZNF79Q15937 498 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 PYDC2Q56P42 97 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 RNLSQ5VYX0 342 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 C9orf40Q8IXQ3 194 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 PIGKQ92643 395 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 SLC25A36Q96CQ1 311 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 PRO3102Q9H379 93 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 ADGRL4Q9HBW9 690 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 UBQLN4Q9NRR5 601 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 BABAM2Q9NXR7 383 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 SERTAD3Q9UJW9 196 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 V9GYH0 126 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 SDK2Q58EX2 2172 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 URB1O60287 2271 aaKnown RBP15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 TEX13CA0A0J9YWL9 993 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 SLC22A31A6NKX4 558 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 MEN1O00255 615 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 PLGP00747 810 aaPredicted RBP15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 CFIP05156 583 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 RPS5P46782 204 aaKnown RBP15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 ZNF181Q2M3W8 571 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 IDNKQ5T6J7 187 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 GDPD3Q7L5L3 318 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 LSMEM1Q8N8F7 131 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 SLC38A9Q8NBW4 561 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 OR5W2Q8NH69 310 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 HOXB13Q92826 284 aaPredicted RBP15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 NEDD4LQ96PU5 975 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 TIMP4Q99727 224 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 EPHA6Q9UF33 1036 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 SPEF1Q9Y4P9 236 aa15.37■□□□□ 0.05
LAPTM4B-201ENST00000445593 C11orf98E9PRG8 122 aa15.36■□□□□ 0.05
LAPTM4B-201ENST00000445593 DDAH2O95865 285 aa15.36■□□□□ 0.05
LAPTM4B-201ENST00000445593 HLA-DPB1P04440 258 aa15.36■□□□□ 0.05
LAPTM4B-201ENST00000445593 MST1P26927 711 aa15.36■□□□□ 0.05
LAPTM4B-201ENST00000445593 SHC1P29353 583 aa15.36■□□□□ 0.05
LAPTM4B-201ENST00000445593 ARRB1P49407 418 aaPredicted RBP15.36■□□□□ 0.05
LAPTM4B-201ENST00000445593 PLCXD2Q0VAA5 305 aa15.36■□□□□ 0.05
LAPTM4B-201ENST00000445593 KLHL26Q53HC5 615 aa15.36■□□□□ 0.05
LAPTM4B-201ENST00000445593 CEP78Q5JTW2 689 aa15.36■□□□□ 0.05
LAPTM4B-201ENST00000445593 TMEM91Q6ZNR0 172 aa15.36■□□□□ 0.05
LAPTM4B-201ENST00000445593 KTI12Q96EK9 354 aaPredicted RBP15.36■□□□□ 0.05
LAPTM4B-201ENST00000445593 LCORQ96JN0 433 aaPredicted RBP15.36■□□□□ 0.05
LAPTM4B-201ENST00000445593 RPRD1BQ9NQG5 326 aaKnown RBP15.36■□□□□ 0.05
LAPTM4B-201ENST00000445593 A3GALT2U3KPV4 340 aa15.36■□□□□ 0.05
LAPTM4B-201ENST00000445593 A0A087WUJ7 227 aa15.36■□□□□ 0.05
LAPTM4B-201ENST00000445593 IDSB3KWA1 339 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms