RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 A0A1W2PRG6 482 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 RGS13O14921 159 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 ZNF217O75362 1048 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 PSKH1P11801 424 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 NPR2P20594 1047 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 HLA-DMAP28067 261 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 CD38P28907 300 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 CD1CP29017 333 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 RPL4P36578 427 aaKnown RBP16.31■□□□□ 0.2
CLDN9-201ENST00000445369 NAA10P41227 235 aaPredicted RBP16.31■□□□□ 0.2
CLDN9-201ENST00000445369 DIO1P49895 249 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 GXYLT1Q4G148 440 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 SAMD12Q8N8I0 201 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 OR7G1Q8NGA0 311 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 ZNRF4Q8WWF5 429 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 CCNL2Q96S94 520 aaPredicted RBP16.31■□□□□ 0.2
CLDN9-201ENST00000445369 GPX7Q96SL4 187 aaPredicted RBP16.31■□□□□ 0.2
CLDN9-201ENST00000445369 NMNAT2Q9BZQ4 307 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 CHRNA10Q9GZZ6 450 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 SPRTNQ9H040 489 aaPredicted RBP16.31■□□□□ 0.2
CLDN9-201ENST00000445369 C17orf105B2RV13 164 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 MAGEB4O15481 346 aaPredicted RBP16.31■□□□□ 0.2
CLDN9-201ENST00000445369 CD27P26842 260 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 ADH7P40394 386 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 CLDN20P56880 219 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 LGALS3BPQ08380 585 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 PON3Q15166 354 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 CD226Q15762 336 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 SLC25A35Q3KQZ1 300 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 SLC35D3Q5M8T2 416 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 MED25Q71SY5 747 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 DEFB119Q8N690 84 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 ZPLD1Q8TCW7 415 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 NMNAT3Q96T66 252 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 PDE7BQ9NP56 450 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 SLC2A4RGQ9NR83 387 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 LANCL2Q9NS86 450 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 GMEB2Q9UKD1 530 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 CLCA3PQ9Y6N3 262 aa16.31■□□□□ 0.2
CLDN9-201ENST00000445369 COL5A1P20908 1838 aaPredicted RBP16.3■□□□□ 0.2
CLDN9-201ENST00000445369 EYSQ5T1H1 3165 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 GON4LQ3T8J9 2241 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 TRAV1-2A0A0B4J238 106 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 FAM240BA0A1B0GVZ2 78 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 OR6C68A6NDL8 312 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 IMPA2O14732 288 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 PRKNO60260 465 aaPredicted RBP16.3■□□□□ 0.2
CLDN9-201ENST00000445369 SERPINA3P01011 423 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 IGF2P01344 180 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 SPI1P17947 270 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 TALDO1P37837 337 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 INPP1P49441 399 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 GDI2P50395 445 aaKnown RBP16.3■□□□□ 0.2
CLDN9-201ENST00000445369 GBX2P52951 348 aaPredicted RBP16.3■□□□□ 0.2
CLDN9-201ENST00000445369 PRPS1P60891 318 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 TATDN3Q17R31 274 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 PAMR1Q6UXH9 720 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 ZNF687Q8N1G0 1237 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 GATSQ8NAP1 163 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 TRMT10AQ8TBZ6 339 aaKnown RBP16.3■□□□□ 0.2
CLDN9-201ENST00000445369 UBASH3BQ8TF42 649 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 OIT3Q8WWZ8 545 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 TRIM63Q969Q1 353 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 UPRTQ96BW1 309 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 DMRTB1Q96MA1 342 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.3■□□□□ 0.2
CLDN9-201ENST00000445369 CHRDQ9H2X0 955 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 KLHL1Q9NR64 748 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 NLKQ9UBE8 527 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 COPS3Q9UNS2 423 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 NPFFR2Q9Y5X5 522 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 OIP5O43482 229 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 CD1AP06126 327 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 RAB3BP20337 219 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 IGFBP4P22692 258 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 RCVRNP35243 200 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 SKP2Q13309 424 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 BIKQ13323 160 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 WBP2NLQ6ICG8 309 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 ATG4DQ86TL0 474 aaPredicted RBP16.3■□□□□ 0.2
CLDN9-201ENST00000445369 ZNF321PQ8N8H1 164 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 PTPMT1Q8WUK0 201 aaPredicted RBP16.3■□□□□ 0.2
CLDN9-201ENST00000445369 THAP4Q8WY91 577 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 RASD2Q96D21 266 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 RANGRFQ9HD47 186 aaPredicted RBP16.3■□□□□ 0.2
CLDN9-201ENST00000445369 UBQLN4Q9NRR5 601 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 MAU2Q9Y6X3 613 aa16.3■□□□□ 0.2
CLDN9-201ENST00000445369 ELOA3DA6NLF2 546 aaPredicted RBP16.29■□□□□ 0.2
CLDN9-201ENST00000445369 CENPXA8MT69 81 aa16.29■□□□□ 0.2
CLDN9-201ENST00000445369 METTL12A8MUP2 240 aa16.29■□□□□ 0.2
CLDN9-201ENST00000445369 AGRPO00253 132 aa16.29■□□□□ 0.2
CLDN9-201ENST00000445369 SELENOFO60613 162 aa16.29■□□□□ 0.2
CLDN9-201ENST00000445369 PAHP00439 452 aa16.29■□□□□ 0.2
CLDN9-201ENST00000445369 TFPIP10646 304 aa16.29■□□□□ 0.2
CLDN9-201ENST00000445369 SRFP11831 508 aa16.29■□□□□ 0.2
CLDN9-201ENST00000445369 ALAS2P22557 587 aa16.29■□□□□ 0.2
CLDN9-201ENST00000445369 SLC37A1P57057 533 aa16.29■□□□□ 0.2
CLDN9-201ENST00000445369 RPS11P62280 158 aaKnown RBP eCLIP16.29■□□□□ 0.2
CLDN9-201ENST00000445369 ERVK-25P63136 954 aa16.29■□□□□ 0.2
CLDN9-201ENST00000445369 SIRPAP78324 504 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms