RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 GMDSO60547 372 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 ZFAND5O76080 213 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 UTS2O95399 124 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 CLIC3O95833 236 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 PRG2P13727 222 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 CSRP1P21291 193 aaKnown RBP7.41□□□□□ -1.22
CCDC39-201ENST00000442201 MMP11P24347 488 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 ABCD3P28288 659 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 SEC23BQ15437 767 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 KLHL26Q53HC5 615 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 ZMAT1Q5H9K5 638 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 TIGD3Q6B0B8 471 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 PODNL1Q6PEZ8 512 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 ZNF550Q7Z398 422 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 OR52N1Q8NH53 320 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 MUL1Q969V5 352 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 ZHX1-C8orf76Q96EF9 292 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 DSN1Q9H410 356 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 MAN2C1Q9NTJ4 1040 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 DNAJB12Q9NXW2 375 aaKnown RBP7.41□□□□□ -1.22
CCDC39-201ENST00000442201 FOXJ2Q9P0K8 574 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 MGAT4BQ9UQ53 548 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 SLC35A3Q9Y2D2 325 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 HS3ST3B1Q9Y662 390 aa7.41□□□□□ -1.22
CCDC39-201ENST00000442201 LOC100130705A0A1B0GUX0 176 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 TMEM238LA0A1B0GVL6 79 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 TRAPPC13A5PLN9 417 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 PROB1E7EW31 1015 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 TSPAN2O60636 221 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 TNFSF15O95150 251 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 ADAP00813 363 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 RAB40ALP0C0E4 278 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 ITGAMP11215 1152 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 ZNF250P15622 560 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 TBXA2RP21731 343 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 PNLIPRP2P54317 469 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 RPS15P62841 145 aaKnown RBP7.4□□□□□ -1.22
CCDC39-201ENST00000442201 PLAURQ03405 335 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 PCOLCEQ15113 449 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 BTBD16Q32M84 506 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 PDSS1Q5T2R2 415 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 ZNF770Q6IQ21 691 aaPredicted RBP7.4□□□□□ -1.22
CCDC39-201ENST00000442201 RRM2BQ7LG56 351 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 CCDC103Q8IW40 242 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 OR4K5Q8NGD3 323 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 THAP3Q8WTV1 239 aaPredicted RBP7.4□□□□□ -1.22
CCDC39-201ENST00000442201 CT55Q8WUE5 264 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 GTPBP3Q969Y2 492 aaKnown RBP7.4□□□□□ -1.22
CCDC39-201ENST00000442201 SLC41A3Q96GZ6 507 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 NIPSNAP1Q9BPW8 284 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 ZNF559Q9BR84 538 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 FUZQ9BT04 418 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 NIPAL2Q9H841 368 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 TMEM27Q9HBJ8 222 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 TCFL5Q9UL49 500 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 COPS3Q9UNS2 423 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 FARSAQ9Y285 508 aaKnown RBP7.4□□□□□ -1.22
CCDC39-201ENST00000442201 NTNG1Q9Y2I2 539 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 COL27A1Q8IZC6 1860 aaPredicted RBP7.4□□□□□ -1.22
CCDC39-201ENST00000442201 SLC16A6O15403 523 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 TP53P04637 393 aaPredicted RBP7.4□□□□□ -1.22
CCDC39-201ENST00000442201 CYP4B1P13584 511 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 ACVR2AP27037 513 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 IFNGR2P38484 337 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 RPS5P46782 204 aaKnown RBP7.4□□□□□ -1.22
CCDC39-201ENST00000442201 GDI2P50395 445 aaKnown RBP7.4□□□□□ -1.22
CCDC39-201ENST00000442201 UGT2B15P54855 530 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 FAPQ12884 760 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 EXT1Q16394 746 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 BROXQ5VW32 411 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 GDF7Q7Z4P5 450 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 ZNF440Q8IYI8 595 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 AMER2Q8N7J2 671 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 BPIFB6Q8NFQ5 453 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 MUS81Q96NY9 551 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 DEFB126Q9BYW3 111 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 SLC19A3Q9BZV2 496 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 SLIRPQ9GZT3 109 aaKnown RBP7.4□□□□□ -1.22
CCDC39-201ENST00000442201 ZNF700Q9H0M5 742 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 COQ3Q9NZJ6 369 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 NPFFR2Q9Y5X5 522 aa7.4□□□□□ -1.22
CCDC39-201ENST00000442201 A0A087WUU8 490 aa7.4□□□□□ -1.23
CCDC39-201ENST00000442201 IGHV1-45A0A0A0MS14 117 aa7.4□□□□□ -1.23
CCDC39-201ENST00000442201 DBX1A6NMT0 343 aa7.4□□□□□ -1.23
CCDC39-201ENST00000442201 ICOSLGO75144 302 aa7.4□□□□□ -1.23
CCDC39-201ENST00000442201 GASTP01350 101 aa7.4□□□□□ -1.23
CCDC39-201ENST00000442201 ADH7P40394 386 aa7.4□□□□□ -1.23
CCDC39-201ENST00000442201 GBX2P52951 348 aaPredicted RBP7.4□□□□□ -1.23
CCDC39-201ENST00000442201 FOXK2Q01167 660 aa7.4□□□□□ -1.23
CCDC39-201ENST00000442201 NPRL3Q12980 569 aa7.4□□□□□ -1.23
CCDC39-201ENST00000442201 OR1Q1Q15612 314 aa7.4□□□□□ -1.23
CCDC39-201ENST00000442201 ZNF730Q6ZMV8 503 aa7.4□□□□□ -1.23
CCDC39-201ENST00000442201 RHOUQ7L0Q8 258 aa7.4□□□□□ -1.23
CCDC39-201ENST00000442201 TMPRSS12Q86WS5 348 aa7.4□□□□□ -1.23
CCDC39-201ENST00000442201 C8orf59Q8N0T1 100 aaPredicted RBP7.4□□□□□ -1.23
CCDC39-201ENST00000442201 PHOSPHO1Q8TCT1 267 aa7.4□□□□□ -1.23
CCDC39-201ENST00000442201 ACOT11Q8WXI4 607 aaPredicted RBP7.4□□□□□ -1.23
CCDC39-201ENST00000442201 ZNF416Q9BWM5 594 aa7.4□□□□□ -1.23
CCDC39-201ENST00000442201 TRIM2Q9C040 744 aa7.4□□□□□ -1.23
CCDC39-201ENST00000442201 ZBTB20Q9HC78 741 aaPredicted RBP7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms