RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 SNX31Q8N9S9 440 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 STKLD1Q8NE28 680 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 FAM71CQ8NEG0 241 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 TSEN15Q8WW01 171 aaKnown RBP2.22□□□□□ -2.05
CLK1-204ENST00000432425 ZNF514Q96K75 400 aaPredicted RBP2.22□□□□□ -2.05
CLK1-204ENST00000432425 TSNARE1Q96NA8 513 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 NPY6RQ99463 290 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 ACBD6Q9BR61 282 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 C19orf24Q9BVV8 132 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 HCAR1Q9BXC0 346 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 POTEKPQ9BYX7 375 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 TDRD3Q9H7E2 651 aaKnown RBP2.22□□□□□ -2.05
CLK1-204ENST00000432425 NEK6Q9HC98 313 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 ZFP14Q9HCL3 533 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 C8orf4Q9NR00 106 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 ZCCHC3Q9NUD5 404 aaKnown RBP2.22□□□□□ -2.05
CLK1-204ENST00000432425 ERVK-18Q9QC07 812 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 PEF1Q9UBV8 284 aaKnown RBP2.22□□□□□ -2.05
CLK1-204ENST00000432425 SLC2A6Q9UGQ3 507 aa2.22□□□□□ -2.05
CLK1-204ENST00000432425 MRPS7Q9Y2R9 242 aaKnown RBP2.22□□□□□ -2.05
CLK1-204ENST00000432425 ABCC4O15439 1325 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 GOLGA6L4A6NEF3 574 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 TRIM49D1C9J1S8 452 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 C11orf98E9PRG8 122 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 ZNF701M0R085 212 aaPredicted RBP2.21□□□□□ -2.06
CLK1-204ENST00000432425 HAS3O00219 553 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 CFLARO15519 480 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 RNF13O43567 381 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 CDH16O75309 829 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 TRIM3O75382 744 aaPredicted RBP2.21□□□□□ -2.06
CLK1-204ENST00000432425 TM7SF2O76062 418 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 RHOBTB1O94844 696 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 OR4F21O95013 312 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 SEMA3DO95025 777 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 CCDC166P0CW27 439 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 NR2C1P13056 603 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 CYP11B1P15538 503 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 HNF1AP20823 631 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 ZP3P21754 424 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 PAICSP22234 425 aaKnown RBP2.21□□□□□ -2.06
CLK1-204ENST00000432425 CFL1P23528 166 aaKnown RBP2.21□□□□□ -2.06
CLK1-204ENST00000432425 MAT2AP31153 395 aaKnown RBP2.21□□□□□ -2.06
CLK1-204ENST00000432425 PRDX2P32119 198 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 OR1D4P47884 311 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 ALDH3B2P48448 385 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 CSNK1EP49674 416 aaKnown RBP2.21□□□□□ -2.06
CLK1-204ENST00000432425 RGS4P49798 205 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 CCL11P51671 97 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 DIO3P55073 304 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 ZNF85Q03923 595 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 HSF2Q03933 536 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 MAB21L1Q13394 359 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 ELAVL3Q14576 367 aaKnown RBP2.21□□□□□ -2.06
CLK1-204ENST00000432425 EXOSC7Q15024 291 aaKnown RBP2.21□□□□□ -2.06
CLK1-204ENST00000432425 TMEM31Q5JXX7 168 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 CDKL4Q5MAI5 379 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 OTPQ5XKR4 325 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 TFAP2EQ6VUC0 442 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 MOB1BQ7L9L4 216 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 LRRC8AQ8IWT6 810 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 UBE2J2Q8N2K1 259 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 CERS5Q8N5B7 392 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 COMMD1Q8N668 190 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 OR8J2Q8NGG1 315 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 NDNFQ8TB73 568 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 SLC2A14Q8TDB8 520 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 PAQR8Q8TEZ7 354 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 RNF138Q8WVD3 245 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 TOP1MTQ969P6 601 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 ADIPOR1Q96A54 375 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 TMEM246Q9BRR3 403 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 CNPY3Q9BT09 278 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 HES7Q9BYE0 225 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 PKIBQ9C010 78 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 OPN3Q9H1Y3 402 aaPredicted RBP2.21□□□□□ -2.06
CLK1-204ENST00000432425 RGCCQ9H4X1 137 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 TMEM231Q9H6L2 316 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 ANKRA2Q9H9E1 313 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 RRAGDQ9NQL2 400 aaPredicted RBP2.21□□□□□ -2.06
CLK1-204ENST00000432425 PNO1Q9NRX1 252 aaKnown RBP2.21□□□□□ -2.06
CLK1-204ENST00000432425 AHSPQ9NZD4 102 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 PISDQ9UG56 409 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 CRLS1Q9UJA2 301 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 MGAT4BQ9UQ53 548 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 PDE10AQ9Y233 779 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 LRRC42Q9Y546 428 aa2.21□□□□□ -2.06
CLK1-204ENST00000432425 BZW2Q9Y6E2 419 aaKnown RBP2.21□□□□□ -2.06
CLK1-204ENST00000432425 SF3B1O75533 1304 aaKnown RBP eCLIP2.2□□□□□ -2.062e-6■■■■■ 37.1
CLK1-204ENST00000432425 SYNJ2O15056 1496 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 ANKRD30AQ9BXX3 1397 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 ARID1AO14497 2285 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 TRAV25A0A0B4J276 109 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 A0A0U1RQS6 177 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 TMEM210A6NLX4 147 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 GOLGA8KD6RF30 607 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 E9PMD0 336 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 WWP2O00308 870 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 EMC8O43402 210 aa2.2□□□□□ -2.06
CLK1-204ENST00000432425 CALUO43852 315 aaPredicted RBP2.2□□□□□ -2.06
CLK1-204ENST00000432425 UFL1O94874 794 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms