RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 EGFP01133 1207 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 ATXN8OSP0DMR3 200 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 NAA10P41227 235 aaPredicted RBP12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 GBX2P52951 348 aaPredicted RBP12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 RPS11P62280 158 aaKnown RBP eCLIP12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 ACTA2P62736 377 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 ACTG2P63267 376 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 FAM53BQ14153 422 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 GGTLC2Q14390 218 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 KIRREL2Q6UWL6 708 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 ZNF767PQ75MW2 155 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 SIAH3Q8IW03 269 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 SFTPA2Q8IWL1 248 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 LRRC17Q8N6Y2 441 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 POMGNT2Q8NAT1 580 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 OR11H7Q8NGC8 314 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 LRFN5Q96NI6 719 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 ZFP3Q96NJ6 502 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 CCDC86Q9H6F5 360 aaKnown RBP12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 BRD7Q9NPI1 651 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 HRASLS2Q9NWW9 162 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 CPNE7Q9UBL6 633 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 IER3IP1Q9Y5U9 82 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 ARPC4-TTLL3A0A0A6YYG9 625 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 MCIDASD6RGH6 385 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 ARL6IP5O75915 188 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 UCHL1P09936 223 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 STOMP27105 288 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 PPP1CAP62136 330 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 SIRPAP78324 504 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 CDONQ4KMG0 1287 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 TMEM31Q5JXX7 168 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 C16orf54Q6UWD8 224 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 SLC35F2Q8IXU6 374 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 C7orf61Q8IZ16 206 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 SLCO1C1Q9NYB5 712 aa12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 MRPS7Q9Y2R9 242 aaKnown RBP12.23□□□□□ -0.45
SNRNP200-202ENST00000429650 TEX13CA0A0J9YWL9 993 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 GIFP27352 417 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 PITPNAQ00169 270 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 TFF2Q03403 129 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 ILF3Q12906 894 aaKnown RBP eCLIP12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 ZNHIT3Q15649 155 aaPredicted RBP12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 ULK3Q6PHR2 472 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 ESPNLQ6ZVH7 1005 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 ZNRF4Q8WWF5 429 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 MRGPRX1Q96LB2 322 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 OR14A2Q96R54 314 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 CCDC3Q9BQI4 270 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 MFRPQ9BY79 579 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 RBCK1Q9BYM8 510 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 POT1Q9NUX5 634 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 ADAM18Q9Y3Q7 739 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 LRRN3E7EW58 273 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 CTSBP07858 339 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 GUSBP08236 651 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 FGFBP1Q14512 234 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 RPL22L1Q6P5R6 122 aaKnown RBP12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 KIAA1324Q6UXG2 1013 aaKnown RBP12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 OR9A4Q8NGU2 314 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 SNX33Q8WV41 574 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 SGTBQ96EQ0 304 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 ORAI3Q9BRQ5 295 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 TMEM106CQ9BVX2 250 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 GSDMCQ9BYG8 508 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 LRRN3Q9H3W5 708 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 EMC7Q9NPA0 242 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 MKKSQ9NPJ1 570 aaPredicted RBP12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 MRPL39Q9NYK5 338 aaKnown RBP12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 STMN3Q9NZ72 180 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 SLC23A1Q9UHI7 598 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 PFDN2Q9UHV9 154 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 GNG8Q9UK08 70 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 SPATA2Q9UM82 520 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 DTX4Q9Y2E6 619 aa12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 YBX2Q9Y2T7 364 aaKnown RBP12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 AK6Q9Y3D8 172 aaKnown RBP12.22□□□□□ -0.45
SNRNP200-202ENST00000429650 HEATR5AQ86XA9 2040 aa12.21□□□□□ -0.45
SNRNP200-202ENST00000429650 TRBV2A0A0J9YWF9 115 aa12.21□□□□□ -0.45
SNRNP200-202ENST00000429650 FAM221BA6H8Z2 402 aa12.21□□□□□ -0.45
SNRNP200-202ENST00000429650 GATBO75879 557 aaKnown RBP12.21□□□□□ -0.45
SNRNP200-202ENST00000429650 UBE2IP63279 158 aaKnown RBP12.21□□□□□ -0.45
SNRNP200-202ENST00000429650 SRSF5Q13243 272 aaKnown RBP12.21□□□□□ -0.45
SNRNP200-202ENST00000429650 ZNF141Q15928 474 aa12.21□□□□□ -0.45
SNRNP200-202ENST00000429650 OVCH1Q7RTY7 1134 aa12.21□□□□□ -0.45
SNRNP200-202ENST00000429650 ZNF550Q7Z398 422 aa12.21□□□□□ -0.45
SNRNP200-202ENST00000429650 JAZF1Q86VZ6 243 aa12.21□□□□□ -0.45
SNRNP200-202ENST00000429650 SLITRK4Q8IW52 837 aa12.21□□□□□ -0.45
SNRNP200-202ENST00000429650 OR51Q1Q8NH59 317 aa12.21□□□□□ -0.45
SNRNP200-202ENST00000429650 OR14A16Q8NHC5 309 aa12.21□□□□□ -0.45
SNRNP200-202ENST00000429650 VSTM2LQ96N03 204 aa12.21□□□□□ -0.45
SNRNP200-202ENST00000429650 OR2M2Q96R28 347 aa12.21□□□□□ -0.45
SNRNP200-202ENST00000429650 PDCD1LG2Q9BQ51 273 aa12.21□□□□□ -0.45
SNRNP200-202ENST00000429650 CACNG6Q9BXT2 260 aa12.21□□□□□ -0.45
SNRNP200-202ENST00000429650 OR51J1Q9H342 316 aa12.21□□□□□ -0.45
SNRNP200-202ENST00000429650 ZFP64Q9NPA5 681 aa12.21□□□□□ -0.45
SNRNP200-202ENST00000429650 RPS6KB2Q9UBS0 482 aa12.21□□□□□ -0.45
SNRNP200-202ENST00000429650 ZNF222Q9UK12 451 aa12.21□□□□□ -0.45
SNRNP200-202ENST00000429650 ING4Q9UNL4 249 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms