RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 SGCGQ13326 291 aa8.14□□□□□ -1.11
CDH13-202ENST00000428848 OR1Q1Q15612 314 aa8.14□□□□□ -1.11
CDH13-202ENST00000428848 DUSP5Q16690 384 aa8.14□□□□□ -1.11
CDH13-202ENST00000428848 PABPC1L2AQ5JQF8 200 aa8.14□□□□□ -1.11
CDH13-202ENST00000428848 B3GNTL1Q67FW5 361 aaPredicted RBP8.14□□□□□ -1.11
CDH13-202ENST00000428848 BAIAP2L2Q6UXY1 529 aa8.14□□□□□ -1.11
CDH13-202ENST00000428848 RPTNQ6XPR3 784 aa8.14□□□□□ -1.11
CDH13-202ENST00000428848 SSX6Q7RTT6 188 aa8.14□□□□□ -1.11
CDH13-202ENST00000428848 RANBP3LQ86VV4 465 aaPredicted RBP8.14□□□□□ -1.11
CDH13-202ENST00000428848 FAM98AQ8NCA5 519 aaKnown RBP8.14□□□□□ -1.11
CDH13-202ENST00000428848 OR5J2Q8NH18 312 aa8.14□□□□□ -1.11
CDH13-202ENST00000428848 OR56B4Q8NH76 319 aa8.14□□□□□ -1.11
CDH13-202ENST00000428848 SMPDL3BQ92485 455 aa8.14□□□□□ -1.11
CDH13-202ENST00000428848 GHSRQ92847 366 aa8.14□□□□□ -1.11
CDH13-202ENST00000428848 SLC19A3Q9BZV2 496 aa8.14□□□□□ -1.11
CDH13-202ENST00000428848 ACTR6Q9GZN1 396 aa8.14□□□□□ -1.11
CDH13-202ENST00000428848 MS4A7Q9GZW8 240 aaPredicted RBP8.14□□□□□ -1.11
CDH13-202ENST00000428848 WDR26Q9H7D7 661 aa8.14□□□□□ -1.11
CDH13-202ENST00000428848 SPHK1Q9NYA1 384 aa8.14□□□□□ -1.11
CDH13-202ENST00000428848 KCNE5Q9UJ90 142 aa8.14□□□□□ -1.11
CDH13-202ENST00000428848 ING1Q9UK53 422 aaPredicted RBP8.14□□□□□ -1.11
CDH13-202ENST00000428848 SPATA2Q9UM82 520 aa8.14□□□□□ -1.11
CDH13-202ENST00000428848 PCDHGA9Q9Y5G4 932 aaKnown RBP8.14□□□□□ -1.11
CDH13-202ENST00000428848 COL6A3P12111 3177 aa8.14□□□□□ -1.11
CDH13-202ENST00000428848 TBC1D3EA0A087X179 549 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 A0A1B0GTQ1 180 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 TRABD2BA6NFA1 517 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 OTOL1A6NHN0 477 aaPredicted RBP8.13□□□□□ -1.11
CDH13-202ENST00000428848 LRRN3E7EW58 273 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 J3QLW9 94 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 ST8SIA5O15466 376 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 ZNF749O43361 778 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 SELENOFO60613 162 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 WNT1P04628 370 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 CD1AP06126 327 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 H2AFB1P0C5Y9 115 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 SNRPBP14678 240 aaKnown RBP8.13□□□□□ -1.11
CDH13-202ENST00000428848 ZNF19P17023 458 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 ACVR1BP36896 505 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 TNFRSF4P43489 277 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 VSX2P58304 361 aaPredicted RBP8.13□□□□□ -1.11
CDH13-202ENST00000428848 RPS11P62280 158 aaKnown RBP eCLIP8.13□□□□□ -1.11
CDH13-202ENST00000428848 SNRPNP63162 240 aaKnown RBP8.13□□□□□ -1.11
CDH13-202ENST00000428848 RPS21P63220 83 aaKnown RBP8.13□□□□□ -1.11
CDH13-202ENST00000428848 RPL6Q02878 288 aaKnown RBP8.13□□□□□ -1.11
CDH13-202ENST00000428848 PLAURQ03405 335 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 GRM7Q14831 915 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 SHHQ15465 462 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 GPR68Q15743 365 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 CST6Q15828 149 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 ITPRIPL2Q3MIP1 535 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 SLC22A10Q63ZE4 541 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 ZNF776Q68DI1 518 aaPredicted RBP8.13□□□□□ -1.11
CDH13-202ENST00000428848 VN1R4Q7Z5H5 301 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 ZNF619Q8N2I2 560 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 LRRC25Q8N386 305 aaPredicted RBP8.13□□□□□ -1.11
CDH13-202ENST00000428848 OR13C5Q8NGS8 318 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 OR2T35Q8NGX2 323 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 SCARB1Q8WTV0 552 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 SMIM4Q8WVI0 70 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 THAP4Q8WY91 577 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 GAL3ST3Q96A11 431 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 ELSPBP1Q96BH3 223 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 PEX11GQ96HA9 241 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 LCORQ96JN0 433 aaPredicted RBP8.13□□□□□ -1.11
CDH13-202ENST00000428848 SFXN2Q96NB2 322 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 C1QTNF6Q9BXI9 259 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 LRRN3Q9H3W5 708 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 PLEKHA1Q9HB21 404 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 SDHAF3Q9NRP4 125 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 COA4Q9NYJ1 87 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 NDRG3Q9UGV2 375 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 PPIEQ9UNP9 301 aaKnown RBP8.13□□□□□ -1.11
CDH13-202ENST00000428848 TICRRQ7Z2Z1 1910 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 EML5Q05BV3 1969 aa8.13□□□□□ -1.11
CDH13-202ENST00000428848 PDCD5O14737 125 aa8.12□□□□□ -1.11
CDH13-202ENST00000428848 NUPL2O15504 423 aaKnown RBP8.12□□□□□ -1.11
CDH13-202ENST00000428848 LATO43561 262 aa8.12□□□□□ -1.11
CDH13-202ENST00000428848 HPXP02790 462 aa8.12□□□□□ -1.11
CDH13-202ENST00000428848 DBIP07108 87 aaKnown RBP8.12□□□□□ -1.11
CDH13-202ENST00000428848 MRPL3P09001 348 aaKnown RBP8.12□□□□□ -1.11
CDH13-202ENST00000428848 UCHL1P09936 223 aa8.12□□□□□ -1.11
CDH13-202ENST00000428848 GKN3PP0CG01 181 aa8.12□□□□□ -1.11
CDH13-202ENST00000428848 SMIM10L1P0DMW3 83 aa8.12□□□□□ -1.11
CDH13-202ENST00000428848 CLUP10909 449 aa8.12□□□□□ -1.11
CDH13-202ENST00000428848 NID1P14543 1247 aa8.12□□□□□ -1.11
CDH13-202ENST00000428848 MYOGP15173 224 aa8.12□□□□□ -1.11
CDH13-202ENST00000428848 TYRP1P17643 537 aa8.12□□□□□ -1.11
CDH13-202ENST00000428848 TSPAN7P41732 249 aa8.12□□□□□ -1.11
CDH13-202ENST00000428848 ACTC1P68032 377 aa8.12□□□□□ -1.11
CDH13-202ENST00000428848 ACTA1P68133 377 aa8.12□□□□□ -1.11
CDH13-202ENST00000428848 BTN3A2P78410 334 aa8.12□□□□□ -1.11
CDH13-202ENST00000428848 FHL1Q13642 323 aa8.12□□□□□ -1.11
CDH13-202ENST00000428848 CRMP1Q14194 572 aa8.12□□□□□ -1.11
CDH13-202ENST00000428848 RPE65Q16518 533 aa8.12□□□□□ -1.11
CDH13-202ENST00000428848 FAM209BQ5JX69 171 aa8.12□□□□□ -1.11
CDH13-202ENST00000428848 C9orf50Q5SZB4 431 aa8.12□□□□□ -1.11
CDH13-202ENST00000428848 FHL5Q5TD97 284 aa8.12□□□□□ -1.11
CDH13-202ENST00000428848 TANGO2Q6ICL3 276 aa8.12□□□□□ -1.11
CDH13-202ENST00000428848 VITQ6UXI7 678 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms