RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 H0Y3Z8 333 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 ACOT8O14734 319 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 ARPC2O15144 300 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 GYG2O15488 501 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 SEC14L5O43304 696 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 ZNF208O43345 1280 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 CXCL13O43927 109 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 NPIPB7O75200 414 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 ATP5HO75947 161 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 LDLRP01130 860 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 GLI4P10075 376 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 UQCRBP14927 111 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 CCNA2P20248 432 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 ME2P23368 584 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 FKBP2P26885 142 aaKnown RBP6.64□□□□□ -1.35
LINC01049-201ENST00000426840 CEACAM8P31997 349 aaPredicted RBP6.64□□□□□ -1.35
LINC01049-201ENST00000426840 NTF4P34130 210 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 SFTPDP35247 375 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 TIMP3P35625 211 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 OR1E2P47887 323 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 CLK1P49759 484 aaKnown RBP6.64□□□□□ -1.35
LINC01049-201ENST00000426840 MAP2K6P52564 334 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 CDH12P55289 794 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 CARD18P57730 90 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 NUP107P57740 925 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 ADORA2A-AS1P86434 159 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 PMPCAQ10713 525 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 BNIP2Q12982 314 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 SELENBP1Q13228 472 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 TRIM25Q14258 630 aaKnown RBP6.64□□□□□ -1.35
LINC01049-201ENST00000426840 SF3B4Q15427 424 aaKnown RBP eCLIP6.64□□□□□ -1.35
LINC01049-201ENST00000426840 IQCCQ4KMZ1 466 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 ENTPD8Q5MY95 495 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 ZBTB37Q5TC79 503 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 TMEM211Q6ICI0 200 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 C3orf33Q6P1S2 294 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 POMZP3Q6PJE2 187 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 B3GNT6Q6ZMB0 384 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 ESPNLQ6ZVH7 1005 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 VTCN1Q7Z7D3 282 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 OR10D3Q8NH80 312 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 OR2V1Q8NHB1 315 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 VANGL1Q8TAA9 524 aaPredicted RBP6.64□□□□□ -1.35
LINC01049-201ENST00000426840 PROX1Q92786 737 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 SLC38A4Q969I6 547 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 FAM162AQ96A26 154 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 ZNF845Q96IR2 970 aaPredicted RBP6.64□□□□□ -1.35
LINC01049-201ENST00000426840 TPD52L3Q96J77 140 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 CLPTM1LQ96KA5 538 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 ARL5BQ96KC2 179 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 C7orf34Q96L11 122 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 KLHL15Q96M94 604 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 TRIB1Q96RU8 372 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 CADM1Q9BY67 442 aaKnown RBP6.64□□□□□ -1.35
LINC01049-201ENST00000426840 POTEKPQ9BYX7 375 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 AMBRA1Q9C0C7 1298 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 OR11A1Q9GZK7 315 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 COQ10BQ9H8M1 238 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 C12orf10Q9HB07 376 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 TMEM27Q9HBJ8 222 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 ADPRHL2Q9NX46 363 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 ACTR3BQ9P1U1 418 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 CLCF1Q9UBD9 225 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 CHRNA9Q9UGM1 479 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 SLC13A4Q9UKG4 626 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 SNX13Q9Y5W8 968 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 MPDZO75970 2070 aa6.64□□□□□ -1.35
LINC01049-201ENST00000426840 NCOA6Q14686 2063 aaPredicted RBP6.64□□□□□ -1.35
LINC01049-201ENST00000426840 IGKV1D-42A0A075B6H8 117 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 A0A087WUJ7 227 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 A0A0B4J2E0 115 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 A0A1B0GX12 115 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 TCRBV5S2A0A599 114 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 MBD3L4A6NDZ8 208 aaPredicted RBP6.63□□□□□ -1.35
LINC01049-201ENST00000426840 MBD3L3A6NE82 208 aaPredicted RBP6.63□□□□□ -1.35
LINC01049-201ENST00000426840 MBD3L5A6NJ08 208 aaPredicted RBP6.63□□□□□ -1.35
LINC01049-201ENST00000426840 CPSF4LA6NMK7 179 aaKnown RBP6.63□□□□□ -1.35
LINC01049-201ENST00000426840 TNFSF11O14788 317 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 ZG16O60844 167 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 GMNNO75496 209 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 DNAJC8O75937 253 aaPredicted RBP6.63□□□□□ -1.35
LINC01049-201ENST00000426840 PDE5AO76074 875 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 PRKD3O94806 890 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 RCBTB2O95199 551 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 ZNF682O95780 498 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 TGM6O95932 706 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 RNF224P0DH78 156 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 TFPIP10646 304 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 IMPDH2P12268 514 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 KLK2P20151 261 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 ATP6V1B2P21281 511 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 FUT4P22083 530 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 CXCR1P25024 350 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 AGFG1P52594 562 aaKnown RBP6.63□□□□□ -1.35
LINC01049-201ENST00000426840 RAC3P60763 192 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 RPS3AP61247 264 aaKnown RBP6.63□□□□□ -1.35
LINC01049-201ENST00000426840 NCALDP61601 193 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 EGR4Q05215 589 aa6.63□□□□□ -1.35
LINC01049-201ENST00000426840 PIN1Q13526 163 aaPredicted RBP6.63□□□□□ -1.35
LINC01049-201ENST00000426840 SGCBQ16585 318 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms