RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 TSSK3Q96PN8 268 aa12.23□□□□□ -0.45
HDAC6-206ENST00000426196 PAFAH2Q99487 392 aa12.23□□□□□ -0.45
HDAC6-206ENST00000426196 NAPGQ99747 312 aaPredicted RBP12.23□□□□□ -0.45
HDAC6-206ENST00000426196 G6PC2Q9NQR9 355 aa12.23□□□□□ -0.45
HDAC6-206ENST00000426196 CORINQ9Y5Q5 1042 aa12.23□□□□□ -0.45
HDAC6-206ENST00000426196 KCNE3Q9Y6H6 103 aa12.23□□□□□ -0.45
HDAC6-206ENST00000426196 OR6C65A6NJZ3 312 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 J3QLI3 93 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 M0R233 179 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 PIP5K1BO14986 540 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 PPIHO43447 177 aaKnown RBP12.22□□□□□ -0.45
HDAC6-206ENST00000426196 SYNGR3O43761 229 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 IGKV3-15P01624 115 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 GSTA1P08263 222 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 ZFP36P26651 326 aaKnown RBP12.22□□□□□ -0.45
HDAC6-206ENST00000426196 CCT3P49368 545 aaKnown RBP12.22□□□□□ -0.45
HDAC6-206ENST00000426196 TMEM33P57088 247 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 TUBA1BP68363 451 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 TUBA4AP68366 448 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 SNTB2Q13425 540 aaKnown RBP12.22□□□□□ -0.45
HDAC6-206ENST00000426196 KIAA0040Q15053 153 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 GPR68Q15743 365 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 ZNF141Q15928 474 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 SPDYE7PQ495Y7 208 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 ACSM5Q6NUN0 579 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 PAQR6Q6TCH4 344 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 TUBA1AQ71U36 451 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 R3HCC1LQ7Z5L2 792 aaKnown RBP12.22□□□□□ -0.45
HDAC6-206ENST00000426196 CLHC1Q8NHS4 586 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 MAGEE2Q8TD90 523 aaPredicted RBP12.22□□□□□ -0.45
HDAC6-206ENST00000426196 RDH5Q92781 318 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 AURKBQ96GD4 344 aaPredicted RBP12.22□□□□□ -0.45
HDAC6-206ENST00000426196 SDF2Q99470 211 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 TMPRSS13Q9BYE2 586 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 GSTO2Q9H4Y5 243 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 SEC61A2Q9H9S3 476 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 C1orf109Q9NX04 203 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 REV1Q9UBZ9 1251 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 PCDHGB4Q9UN71 923 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 CMAHPQ9Y471 501 aa12.22□□□□□ -0.45
HDAC6-206ENST00000426196 IGHV2OR16-5A0A0B4J2B6 119 aa12.21□□□□□ -0.45
HDAC6-206ENST00000426196 POM121CA8CG34 1229 aa12.21□□□□□ -0.45
HDAC6-206ENST00000426196 H3BQF6 201 aa12.21□□□□□ -0.45
HDAC6-206ENST00000426196 NR5A2O00482 541 aa12.21□□□□□ -0.45
HDAC6-206ENST00000426196 WNT9BO14905 357 aa12.21□□□□□ -0.45
HDAC6-206ENST00000426196 URI1O94763 535 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-206ENST00000426196 MPZL1O95297 269 aa12.21□□□□□ -0.45
HDAC6-206ENST00000426196 ADRA2CP18825 462 aa12.21□□□□□ -0.45
HDAC6-206ENST00000426196 SDC1P18827 310 aa12.21□□□□□ -0.45
HDAC6-206ENST00000426196 CCNA2P20248 432 aa12.21□□□□□ -0.45
HDAC6-206ENST00000426196 PRPH2P23942 346 aa12.21□□□□□ -0.45
HDAC6-206ENST00000426196 LMO4P61968 165 aa12.21□□□□□ -0.45
HDAC6-206ENST00000426196 IL13RA1P78552 427 aa12.21□□□□□ -0.45
HDAC6-206ENST00000426196 OCLNQ16625 522 aa12.21□□□□□ -0.45
HDAC6-206ENST00000426196 CCNYL1Q8N7R7 359 aa12.21□□□□□ -0.45
HDAC6-206ENST00000426196 OR9K2Q8NGE7 335 aa12.21□□□□□ -0.45
HDAC6-206ENST00000426196 BCL2L2Q92843 193 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-206ENST00000426196 DDIT4LQ96D03 193 aa12.21□□□□□ -0.45
HDAC6-206ENST00000426196 MTERF3Q96E29 417 aa12.21□□□□□ -0.45
HDAC6-206ENST00000426196 ALKBH3Q96Q83 286 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-206ENST00000426196 OR7D2Q96RA2 312 aa12.21□□□□□ -0.45
HDAC6-206ENST00000426196 ZNF416Q9BWM5 594 aa12.21□□□□□ -0.45
HDAC6-206ENST00000426196 MS4A5Q9H3V2 200 aa12.21□□□□□ -0.45
HDAC6-206ENST00000426196 ZMAT3Q9HA38 289 aaKnown RBP12.21□□□□□ -0.45
HDAC6-206ENST00000426196 ZNF275Q9NSD4 429 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-206ENST00000426196 GPATCH2Q9NW75 528 aa12.21□□□□□ -0.45
HDAC6-206ENST00000426196 OXSMQ9NWU1 459 aa12.21□□□□□ -0.45
HDAC6-206ENST00000426196 NINJ2Q9NZG7 142 aa12.21□□□□□ -0.45
HDAC6-206ENST00000426196 TMEM216Q9P0N5 145 aa12.21□□□□□ -0.45
HDAC6-206ENST00000426196 ARHGAP32A7KAX9 2087 aa12.21□□□□□ -0.45
HDAC6-206ENST00000426196 A0A096LPE4 126 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 A0A1W2PPZ6 126 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 SLC28A1O00337 649 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 STX11O75558 287 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 PRSS23O95084 383 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 AK1P00568 194 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 HPXP02790 462 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 CELA3BP08861 270 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 HOXB1P14653 301 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-206ENST00000426196 PRTN3P24158 256 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 COL8A2P25067 703 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 RYKP34925 604 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 HPCAL1P37235 193 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 EVX1P49640 407 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 SH3BGRP55822 239 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-206ENST00000426196 GNG11P61952 73 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 ZP4Q12836 540 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 DAG1Q14118 895 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 OTUD3Q5T2D3 398 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-206ENST00000426196 DCAF12L2Q5VW00 463 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 ADGRG3Q86Y34 549 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 RIBC1Q8N443 379 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-206ENST00000426196 SPATA4Q8NEY3 305 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 IL17RDQ8NFM7 739 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 OR5D16Q8NGK9 328 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 SFXN5Q8TD22 340 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 C22orf15Q8WYQ4 148 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 PMM1Q92871 262 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 MOAP1Q96BY2 351 aa12.2□□□□□ -0.46
HDAC6-206ENST00000426196 RAB39BQ96DA2 213 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms